RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 RALBP1Q15311 655 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
SPTAN1-202ENST00000372731 ZFYVE27Q5T4F4 411 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 RSPH4AQ5TD94 716 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 ELL2O00472 640 aaPredicted RBP11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 CPLX1O14810 134 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 DIAPH3Q9NSV4 1193 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 BRMS1Q9HCU9 246 aa11.23□□□□□ -0.61
SPTAN1-202ENST00000372731 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 ARID3AQ99856 593 aa11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 FYB1O15117 783 aa11.22□□□□□ -0.61
SPTAN1-202ENST00000372731 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
SPTAN1-202ENST00000372731 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.62
SPTAN1-202ENST00000372731 RUSC2Q8N2Y8 1516 aa11.21□□□□□ -0.62
SPTAN1-202ENST00000372731 OSCARQ8IYS5 282 aa11.21□□□□□ -0.62
SPTAN1-202ENST00000372731 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.62
SPTAN1-202ENST00000372731 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.62
SPTAN1-202ENST00000372731 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 GPS2Q13227 327 aa11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 PPM1FP49593 454 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 SLC3A2P08195 630 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 SAFBQ15424 915 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPTAN1-202ENST00000372731 BECN2A8MW95 431 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 PLIN1O60240 522 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 JPH4Q96JJ6 628 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
SPTAN1-202ENST00000372731 XBP1P17861 261 aa11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.622e-7■■■□□ 18.5
SPTAN1-202ENST00000372731 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 RNF20Q5VTR2 975 aa11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
SPTAN1-202ENST00000372731 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 CDR1P51861 262 aa11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 PANK3Q9H999 370 aa11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
SPTAN1-202ENST00000372731 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
SPTAN1-202ENST00000372731 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
SPTAN1-202ENST00000372731 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-202ENST00000372731 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
SPTAN1-202ENST00000372731 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 SYCP1Q15431 976 aa11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 MYO6Q9UM54 1294 aa11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 CCDC97Q96F63 343 aaPredicted RBP11.15□□□□□ -0.62
SPTAN1-202ENST00000372731 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 OFD1O75665 1012 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 NUTM2GQ5VZR2 741 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 DNAI2Q9GZS0 605 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 CDK5RAP3Q96JB5 506 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
SPTAN1-202ENST00000372731 FOXD4L6Q3SYB3 417 aaPredicted RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 FOXD4L3Q6VB84 417 aaPredicted RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 TOP2AP11388 1531 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 RUFY1Q96T51 708 aa11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 DEKP35659 375 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 DESP17661 470 aa11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
SPTAN1-202ENST00000372731 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-202ENST00000372731 AK7Q96M32 723 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms