RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
NUP188-201ENST00000372577 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
NUP188-201ENST00000372577 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
NUP188-201ENST00000372577 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
NUP188-201ENST00000372577 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 GNAI1P63096 354 aa13.03□□□□□ -0.32
NUP188-201ENST00000372577 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
NUP188-201ENST00000372577 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
NUP188-201ENST00000372577 CHAF1AQ13111 956 aaPredicted RBP13.02□□□□□ -0.32
NUP188-201ENST00000372577 DZIP1LQ8IYY4 767 aaKnown RBP13.02□□□□□ -0.32
NUP188-201ENST00000372577 RIPK4P57078 832 aa13.02□□□□□ -0.32
NUP188-201ENST00000372577 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
NUP188-201ENST00000372577 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
NUP188-201ENST00000372577 GRIN2AQ12879 1464 aa13.02□□□□□ -0.33
NUP188-201ENST00000372577 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.33
NUP188-201ENST00000372577 KIF14Q15058 1648 aa13.01□□□□□ -0.33
NUP188-201ENST00000372577 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
NUP188-201ENST00000372577 SLC52A1Q9NWF4 448 aa13.01□□□□□ -0.33
NUP188-201ENST00000372577 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
NUP188-201ENST00000372577 PLIN1O60240 522 aa13.01□□□□□ -0.33
NUP188-201ENST00000372577 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
NUP188-201ENST00000372577 COG6Q9Y2V7 657 aa13□□□□□ -0.33
NUP188-201ENST00000372577 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
NUP188-201ENST00000372577 TEFQ10587 303 aa13□□□□□ -0.33
NUP188-201ENST00000372577 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
NUP188-201ENST00000372577 TAF7LQ5H9L4 462 aa13□□□□□ -0.33
NUP188-201ENST00000372577 NUTM2FA1L443 756 aa13□□□□□ -0.33
NUP188-201ENST00000372577 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
NUP188-201ENST00000372577 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
NUP188-201ENST00000372577 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
NUP188-201ENST00000372577 NBPF8Q3BBV2 869 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 CFAP70Q5T0N1 1121 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 ERBINQ96RT1 1412 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
NUP188-201ENST00000372577 GOLGA6L3A6NEY3 463 aa12.97□□□□□ -0.33
NUP188-201ENST00000372577 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
NUP188-201ENST00000372577 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
NUP188-201ENST00000372577 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
NUP188-201ENST00000372577 CCDC34Q96HJ3 373 aa12.97□□□□□ -0.33
NUP188-201ENST00000372577 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
NUP188-201ENST00000372577 NINLQ9Y2I6 1382 aa12.96□□□□□ -0.33
NUP188-201ENST00000372577 PHF14O94880 888 aa12.96□□□□□ -0.33
NUP188-201ENST00000372577 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.34
NUP188-201ENST00000372577 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.34
NUP188-201ENST00000372577 ABCC5O15440 1437 aa12.96□□□□□ -0.34
NUP188-201ENST00000372577 REC8O95072 547 aa12.95□□□□□ -0.34
NUP188-201ENST00000372577 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
NUP188-201ENST00000372577 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
NUP188-201ENST00000372577 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
NUP188-201ENST00000372577 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
NUP188-201ENST00000372577 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
NUP188-201ENST00000372577 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
NUP188-201ENST00000372577 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
NUP188-201ENST00000372577 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
NUP188-201ENST00000372577 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
NUP188-201ENST00000372577 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
NUP188-201ENST00000372577 NBPF1Q3BBV0 1214 aa12.94□□□□□ -0.34
NUP188-201ENST00000372577 PSME1Q06323 249 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 MTHFSP49914 203 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 TPM4P67936 248 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 GGNBP2Q9H3C7 697 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
NUP188-201ENST00000372577 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
NUP188-201ENST00000372577 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
NUP188-201ENST00000372577 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
NUP188-201ENST00000372577 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
NUP188-201ENST00000372577 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
NUP188-201ENST00000372577 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
NUP188-201ENST00000372577 PNISRQ8TF01 805 aaKnown RBP12.91□□□□□ -0.34
NUP188-201ENST00000372577 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
NUP188-201ENST00000372577 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
NUP188-201ENST00000372577 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.34
NUP188-201ENST00000372577 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.35
NUP188-201ENST00000372577 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.35
NUP188-201ENST00000372577 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
NUP188-201ENST00000372577 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
NUP188-201ENST00000372577 RILPL2Q969X0 211 aa12.89□□□□□ -0.35
NUP188-201ENST00000372577 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
NUP188-201ENST00000372577 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
NUP188-201ENST00000372577 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
NUP188-201ENST00000372577 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
NUP188-201ENST00000372577 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
NUP188-201ENST00000372577 PRAM1Q96QH2 718 aa12.88□□□□□ -0.35
NUP188-201ENST00000372577 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
NUP188-201ENST00000372577 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
NUP188-201ENST00000372577 GPRASP1Q5JY77 1395 aa12.87□□□□□ -0.35
NUP188-201ENST00000372577 EVA1CP58658 441 aa12.87□□□□□ -0.35
NUP188-201ENST00000372577 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
NUP188-201ENST00000372577 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms