RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SLIT1O75093 1534 aa22.89■■□□□ 1.26
C9orf78-201ENST00000372447 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
C9orf78-201ENST00000372447 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
C9orf78-201ENST00000372447 ANKLE2Q86XL3 938 aa22.89■■□□□ 1.25
C9orf78-201ENST00000372447 NEURL4Q96JN8 1562 aa22.88■■□□□ 1.25
C9orf78-201ENST00000372447 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
C9orf78-201ENST00000372447 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
C9orf78-201ENST00000372447 RPGRIP1LQ68CZ1 1315 aa22.87■■□□□ 1.25
C9orf78-201ENST00000372447 NCKAP5LQ9HCH0 1330 aa22.87■■□□□ 1.25
C9orf78-201ENST00000372447 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
C9orf78-201ENST00000372447 HDGFP51858 240 aaKnown RBP22.85■■□□□ 1.25
C9orf78-201ENST00000372447 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.84■■□□□ 1.25
C9orf78-201ENST00000372447 NEXMIFQ5QGS0 1516 aa22.83■■□□□ 1.25
C9orf78-201ENST00000372447 PPP1R15AO75807 674 aaPredicted RBP22.82■■□□□ 1.24
C9orf78-201ENST00000372447 DCAF11Q8TEB1 546 aa22.82■■□□□ 1.24
C9orf78-201ENST00000372447 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
C9orf78-201ENST00000372447 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
C9orf78-201ENST00000372447 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
C9orf78-201ENST00000372447 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
C9orf78-201ENST00000372447 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
C9orf78-201ENST00000372447 KDM2AQ9Y2K7 1162 aa22.79■■□□□ 1.24
C9orf78-201ENST00000372447 STRCQ7RTU9 1775 aa22.79■■□□□ 1.24
C9orf78-201ENST00000372447 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
C9orf78-201ENST00000372447 PPLO60437 1756 aa22.77■■□□□ 1.24
C9orf78-201ENST00000372447 MED14O60244 1454 aa22.76■■□□□ 1.23
C9orf78-201ENST00000372447 PLEKHG1Q9ULL1 1385 aa22.75■■□□□ 1.23
C9orf78-201ENST00000372447 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
C9orf78-201ENST00000372447 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
C9orf78-201ENST00000372447 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
C9orf78-201ENST00000372447 BCANQ96GW7 911 aa22.74■■□□□ 1.23
C9orf78-201ENST00000372447 STAC3Q96MF2 364 aa22.74■■□□□ 1.23
C9orf78-201ENST00000372447 MIER1Q8N108 512 aa22.73■■□□□ 1.23
C9orf78-201ENST00000372447 MYOM2P54296 1465 aa22.72■■□□□ 1.23
C9orf78-201ENST00000372447 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
C9orf78-201ENST00000372447 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
C9orf78-201ENST00000372447 NRXN1Q9ULB1 1477 aa22.69■■□□□ 1.22
C9orf78-201ENST00000372447 ADAMTS13Q76LX8 1427 aa22.68■■□□□ 1.22
C9orf78-201ENST00000372447 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
C9orf78-201ENST00000372447 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
C9orf78-201ENST00000372447 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
C9orf78-201ENST00000372447 NRXN3Q9Y4C0 1643 aa22.66■■□□□ 1.22
C9orf78-201ENST00000372447 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
C9orf78-201ENST00000372447 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.22
C9orf78-201ENST00000372447 C14orf93Q9H972 538 aaKnown RBP22.64■■□□□ 1.22
C9orf78-201ENST00000372447 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
C9orf78-201ENST00000372447 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
C9orf78-201ENST00000372447 ALKQ9UM73 1620 aa22.61■■□□□ 1.21
C9orf78-201ENST00000372447 METP08581 1390 aa22.6■■□□□ 1.21
C9orf78-201ENST00000372447 TMEM132EQ6IEE7 984 aa22.58■■□□□ 1.2
C9orf78-201ENST00000372447 DIP2AQ14689 1571 aa22.57■■□□□ 1.2
C9orf78-201ENST00000372447 NBPF1Q3BBV0 1214 aa22.55■■□□□ 1.2
C9orf78-201ENST00000372447 ZNF335Q9H4Z2 1342 aaPredicted RBP22.55■■□□□ 1.2
C9orf78-201ENST00000372447 SETD1AO15047 1707 aaKnown RBP22.55■■□□□ 1.2
C9orf78-201ENST00000372447 PIK3R4Q99570 1358 aa22.54■■□□□ 1.2
C9orf78-201ENST00000372447 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
C9orf78-201ENST00000372447 KCNA6P17658 529 aa22.53■■□□□ 1.2
C9orf78-201ENST00000372447 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.2
C9orf78-201ENST00000372447 CENPBP07199 599 aaPredicted RBP22.52■■□□□ 1.2
C9orf78-201ENST00000372447 AMOTL2Q9Y2J4 779 aa22.52■■□□□ 1.2
C9orf78-201ENST00000372447 LAMC1P11047 1609 aa22.51■■□□□ 1.19
C9orf78-201ENST00000372447 ADGRB1O14514 1584 aa22.5■■□□□ 1.19
C9orf78-201ENST00000372447 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
C9orf78-201ENST00000372447 STK26Q9P289 416 aa22.49■■□□□ 1.19
C9orf78-201ENST00000372447 KIAA1210Q9ULL0 1709 aa22.48■■□□□ 1.19
C9orf78-201ENST00000372447 TRPM1Q7Z4N2 1603 aa22.48■■□□□ 1.19
C9orf78-201ENST00000372447 CHD2O14647 1828 aaKnown RBP22.48■■□□□ 1.19
C9orf78-201ENST00000372447 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
C9orf78-201ENST00000372447 ROCK2O75116 1388 aaKnown RBP22.47■■□□□ 1.19
C9orf78-201ENST00000372447 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
C9orf78-201ENST00000372447 STRCP1A6NGW2 1772 aa22.46■■□□□ 1.19
C9orf78-201ENST00000372447 RALGAPBQ86X10 1494 aa22.45■■□□□ 1.18
C9orf78-201ENST00000372447 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
C9orf78-201ENST00000372447 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
C9orf78-201ENST00000372447 NWD1Q149M9 1564 aa22.44■■□□□ 1.18
C9orf78-201ENST00000372447 GPRASP1Q5JY77 1395 aa22.43■■□□□ 1.18
C9orf78-201ENST00000372447 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
C9orf78-201ENST00000372447 CARD11Q9BXL7 1154 aa22.43■■□□□ 1.18
C9orf78-201ENST00000372447 LTBP4Q8N2S1 1624 aa22.42■■□□□ 1.18
C9orf78-201ENST00000372447 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
C9orf78-201ENST00000372447 XRN1Q8IZH2 1706 aaKnown RBP22.42■■□□□ 1.18
C9orf78-201ENST00000372447 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
C9orf78-201ENST00000372447 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
C9orf78-201ENST00000372447 RBM33Q96EV2 1170 aaKnown RBP22.41■■□□□ 1.18
C9orf78-201ENST00000372447 TECPR2O15040 1411 aa22.4■■□□□ 1.18
C9orf78-201ENST00000372447 NKTRP30414 1462 aaKnown RBP22.4■■□□□ 1.18
C9orf78-201ENST00000372447 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
C9orf78-201ENST00000372447 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
C9orf78-201ENST00000372447 PTCH1Q13635 1447 aa22.38■■□□□ 1.17
C9orf78-201ENST00000372447 CPS1P31327 1500 aa22.38■■□□□ 1.17
C9orf78-201ENST00000372447 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
C9orf78-201ENST00000372447 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
C9orf78-201ENST00000372447 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
C9orf78-201ENST00000372447 PRAM1Q96QH2 718 aa22.36■■□□□ 1.17
C9orf78-201ENST00000372447 TMEM94Q12767 1356 aa22.36■■□□□ 1.17
C9orf78-201ENST00000372447 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
C9orf78-201ENST00000372447 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
C9orf78-201ENST00000372447 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
C9orf78-201ENST00000372447 DLC1Q96QB1 1528 aa22.35■■□□□ 1.17
C9orf78-201ENST00000372447 POGKQ9P215 609 aa22.33■■□□□ 1.17
C9orf78-201ENST00000372447 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms