RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ANKLE2Q86XL3 938 aa23.75■■□□□ 1.39
TMEM53-203ENST00000372242 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
TMEM53-203ENST00000372242 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
TMEM53-203ENST00000372242 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
TMEM53-203ENST00000372242 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
TMEM53-203ENST00000372242 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
TMEM53-203ENST00000372242 NEXMIFQ5QGS0 1516 aa23.71■■□□□ 1.39
TMEM53-203ENST00000372242 NEURL4Q96JN8 1562 aa23.71■■□□□ 1.39
TMEM53-203ENST00000372242 POLR1AO95602 1720 aaPredicted RBP23.71■■□□□ 1.39
TMEM53-203ENST00000372242 PPP1R15AO75807 674 aaPredicted RBP23.7■■□□□ 1.38
TMEM53-203ENST00000372242 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
TMEM53-203ENST00000372242 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
TMEM53-203ENST00000372242 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.68■■□□□ 1.38
TMEM53-203ENST00000372242 PPLO60437 1756 aa23.68■■□□□ 1.38
TMEM53-203ENST00000372242 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
TMEM53-203ENST00000372242 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
TMEM53-203ENST00000372242 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
TMEM53-203ENST00000372242 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.38
TMEM53-203ENST00000372242 NPHP4O75161 1426 aaPredicted RBP23.64■■□□□ 1.38
TMEM53-203ENST00000372242 MED14O60244 1454 aa23.64■■□□□ 1.37
TMEM53-203ENST00000372242 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
TMEM53-203ENST00000372242 BCANQ96GW7 911 aa23.63■■□□□ 1.37
TMEM53-203ENST00000372242 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
TMEM53-203ENST00000372242 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
TMEM53-203ENST00000372242 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
TMEM53-203ENST00000372242 PLEKHG1Q9ULL1 1385 aa23.61■■□□□ 1.37
TMEM53-203ENST00000372242 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
TMEM53-203ENST00000372242 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
TMEM53-203ENST00000372242 TONSLQ96HA7 1378 aa23.58■■□□□ 1.37
TMEM53-203ENST00000372242 MYOM2P54296 1465 aa23.56■■□□□ 1.36
TMEM53-203ENST00000372242 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
TMEM53-203ENST00000372242 ADAMTS13Q76LX8 1427 aa23.54■■□□□ 1.36
TMEM53-203ENST00000372242 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
TMEM53-203ENST00000372242 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
TMEM53-203ENST00000372242 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
TMEM53-203ENST00000372242 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
TMEM53-203ENST00000372242 ALKQ9UM73 1620 aa23.49■■□□□ 1.35
TMEM53-203ENST00000372242 TBX22Q9Y458 520 aa23.49■■□□□ 1.35
TMEM53-203ENST00000372242 CFAP70Q5T0N1 1121 aa23.47■■□□□ 1.35
TMEM53-203ENST00000372242 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
TMEM53-203ENST00000372242 METP08581 1390 aa23.46■■□□□ 1.35
TMEM53-203ENST00000372242 ZNF335Q9H4Z2 1342 aaPredicted RBP23.46■■□□□ 1.35
TMEM53-203ENST00000372242 DIP2AQ14689 1571 aa23.45■■□□□ 1.35
TMEM53-203ENST00000372242 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
TMEM53-203ENST00000372242 C14orf93Q9H972 538 aaKnown RBP23.45■■□□□ 1.34
TMEM53-203ENST00000372242 NBPF8Q3BBV2 869 aa23.43■■□□□ 1.34
TMEM53-203ENST00000372242 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
TMEM53-203ENST00000372242 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
TMEM53-203ENST00000372242 LAMC1P11047 1609 aa23.4■■□□□ 1.34
TMEM53-203ENST00000372242 PTPRUQ92729 1446 aa23.39■■□□□ 1.34
TMEM53-203ENST00000372242 STRCP1A6NGW2 1772 aa23.39■■□□□ 1.33
TMEM53-203ENST00000372242 ASXL1Q8IXJ9 1541 aa23.39■■□□□ 1.33
TMEM53-203ENST00000372242 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
TMEM53-203ENST00000372242 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
TMEM53-203ENST00000372242 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
TMEM53-203ENST00000372242 KCNA6P17658 529 aa23.37■■□□□ 1.33
TMEM53-203ENST00000372242 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
TMEM53-203ENST00000372242 STK26Q9P289 416 aa23.36■■□□□ 1.33
TMEM53-203ENST00000372242 TRPM1Q7Z4N2 1603 aa23.35■■□□□ 1.33
TMEM53-203ENST00000372242 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
TMEM53-203ENST00000372242 KIAA1210Q9ULL0 1709 aa23.34■■□□□ 1.33
TMEM53-203ENST00000372242 NWD1Q149M9 1564 aa23.33■■□□□ 1.33
TMEM53-203ENST00000372242 LTBP4Q8N2S1 1624 aa23.32■■□□□ 1.32
TMEM53-203ENST00000372242 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
TMEM53-203ENST00000372242 XRN1Q8IZH2 1706 aaKnown RBP23.31■■□□□ 1.32
TMEM53-203ENST00000372242 RBM33Q96EV2 1170 aaKnown RBP23.31■■□□□ 1.32
TMEM53-203ENST00000372242 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
TMEM53-203ENST00000372242 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
TMEM53-203ENST00000372242 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-203ENST00000372242 TRAK1Q9UPV9 953 aa23.28■■□□□ 1.32
TMEM53-203ENST00000372242 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
TMEM53-203ENST00000372242 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
TMEM53-203ENST00000372242 CPS1P31327 1500 aa23.26■■□□□ 1.31
TMEM53-203ENST00000372242 ABCC11Q96J66 1382 aa23.26■■□□□ 1.31
TMEM53-203ENST00000372242 ROBO2Q9HCK4 1378 aa23.26■■□□□ 1.31
TMEM53-203ENST00000372242 LRRC7Q96NW7 1537 aa23.25■■□□□ 1.31
TMEM53-203ENST00000372242 TECPR2O15040 1411 aa23.23■■□□□ 1.31
TMEM53-203ENST00000372242 WAPLQ7Z5K2 1190 aa23.23■■□□□ 1.31
TMEM53-203ENST00000372242 CARD11Q9BXL7 1154 aa23.23■■□□□ 1.31
TMEM53-203ENST00000372242 KNDC1Q76NI1 1749 aa23.23■■□□□ 1.31
TMEM53-203ENST00000372242 TMEM94Q12767 1356 aa23.22■■□□□ 1.31
TMEM53-203ENST00000372242 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
TMEM53-203ENST00000372242 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
TMEM53-203ENST00000372242 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.31
TMEM53-203ENST00000372242 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
TMEM53-203ENST00000372242 XIRP1Q702N8 1843 aaKnown RBP23.2■■□□□ 1.3
TMEM53-203ENST00000372242 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
TMEM53-203ENST00000372242 ARHGEF28Q8N1W1 1705 aaKnown RBP23.18■■□□□ 1.3
TMEM53-203ENST00000372242 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
TMEM53-203ENST00000372242 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
TMEM53-203ENST00000372242 CERKQ8TCT0 537 aa23.17■■□□□ 1.3
TMEM53-203ENST00000372242 POGKQ9P215 609 aa23.17■■□□□ 1.3
TMEM53-203ENST00000372242 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
TMEM53-203ENST00000372242 SIRT1Q96EB6 747 aa23.16■■□□□ 1.3
TMEM53-203ENST00000372242 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
TMEM53-203ENST00000372242 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
TMEM53-203ENST00000372242 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
TMEM53-203ENST00000372242 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
TMEM53-203ENST00000372242 ADGRL3Q9HAR2 1447 aa23.1■■□□□ 1.29
TMEM53-203ENST00000372242 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms