RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 EVC2Q86UK5 1308 aa29.36■■■□□ 2.29
RAPGEF1-203ENST00000372195 SKOR2Q2VWA4 1001 aaPredicted RBP29.35■■■□□ 2.29
RAPGEF1-203ENST00000372195 KIF3AQ9Y496 699 aa29.35■■■□□ 2.29
RAPGEF1-203ENST00000372195 RAD21O60216 631 aa29.34■■■□□ 2.29
RAPGEF1-203ENST00000372195 JPH4Q96JJ6 628 aa29.34■■■□□ 2.29
RAPGEF1-203ENST00000372195 C9orf78Q9NZ63 289 aaPredicted RBP29.34■■■□□ 2.29
RAPGEF1-203ENST00000372195 WWC1Q8IX03 1113 aa29.34■■■□□ 2.29
RAPGEF1-203ENST00000372195 DZIP1LQ8IYY4 767 aaKnown RBP29.33■■■□□ 2.29
RAPGEF1-203ENST00000372195 PANK1Q8TE04 598 aa29.31■■■□□ 2.28
RAPGEF1-203ENST00000372195 FAM13BQ9NYF5 915 aa29.31■■■□□ 2.28
RAPGEF1-203ENST00000372195 HMOX1P09601 288 aa29.31■■■□□ 2.28
RAPGEF1-203ENST00000372195 FANCIQ9NVI1 1328 aa29.31■■■□□ 2.28
RAPGEF1-203ENST00000372195 DIAPH1O60610 1272 aaKnown RBP29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 LNPKQ9C0E8 428 aa29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 DDX19BQ9UMR2 479 aa29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 TEFQ10587 303 aa29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 AKAP17AQ02040 695 aaKnown RBP29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 ZNF771Q7L3S4 317 aaPredicted RBP29.3■■■□□ 2.28
RAPGEF1-203ENST00000372195 RSPH4AQ5TD94 716 aa29.29■■■□□ 2.28
RAPGEF1-203ENST00000372195 APPP05067 770 aa29.28■■■□□ 2.28
RAPGEF1-203ENST00000372195 IFIT2P09913 472 aaKnown RBP29.27■■■□□ 2.28
RAPGEF1-203ENST00000372195 ATP6V1DQ9Y5K8 247 aa29.27■■■□□ 2.28
RAPGEF1-203ENST00000372195 CEP89Q96ST8 783 aa29.27■■■□□ 2.28
RAPGEF1-203ENST00000372195 EVA1CP58658 441 aa29.25■■■□□ 2.27
RAPGEF1-203ENST00000372195 VPS37CA5D8V6 355 aaPredicted RBP29.24■■■□□ 2.27
RAPGEF1-203ENST00000372195 TSR1Q2NL82 804 aaKnown RBP29.24■■■□□ 2.27
RAPGEF1-203ENST00000372195 BICD2Q8TD16 824 aa29.24■■■□□ 2.27
RAPGEF1-203ENST00000372195 PCMTD1Q96MG8 357 aaPredicted RBP29.24■■■□□ 2.27
RAPGEF1-203ENST00000372195 KDM4AO75164 1064 aa29.24■■■□□ 2.27
RAPGEF1-203ENST00000372195 FKBP5Q13451 457 aaPredicted RBP29.23■■■□□ 2.27
RAPGEF1-203ENST00000372195 PATL2C9JE40 543 aaKnown RBP29.22■■■□□ 2.27
RAPGEF1-203ENST00000372195 REC8O95072 547 aa29.22■■■□□ 2.27
RAPGEF1-203ENST00000372195 SYNE3Q6ZMZ3 975 aa29.22■■■□□ 2.27
RAPGEF1-203ENST00000372195 TTC5Q8N0Z6 440 aa29.22■■■□□ 2.27
RAPGEF1-203ENST00000372195 KIF7Q2M1P5 1343 aa29.22■■■□□ 2.27
RAPGEF1-203ENST00000372195 CHMP5Q9NZZ3 219 aa29.21■■■□□ 2.27
RAPGEF1-203ENST00000372195 VGFO15240 615 aaPredicted RBP29.21■■■□□ 2.27
RAPGEF1-203ENST00000372195 UACAQ9BZF9 1416 aa29.21■■■□□ 2.27
RAPGEF1-203ENST00000372195 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.26
RAPGEF1-203ENST00000372195 NEXNQ0ZGT2 675 aa29.2■■■□□ 2.26
RAPGEF1-203ENST00000372195 ZKSCAN1P17029 563 aaPredicted RBP29.19■■■□□ 2.26
RAPGEF1-203ENST00000372195 RUNDC1Q96C34 613 aa29.19■■■□□ 2.26
RAPGEF1-203ENST00000372195 RUFY2Q8WXA3 655 aa29.19■■■□□ 2.26
RAPGEF1-203ENST00000372195 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.18■■■□□ 2.26
RAPGEF1-203ENST00000372195 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
RAPGEF1-203ENST00000372195 C22orf23Q9BZE7 217 aa29.18■■■□□ 2.26
RAPGEF1-203ENST00000372195 TRIM29Q14134 588 aa29.18■■■□□ 2.26
RAPGEF1-203ENST00000372195 NUTM2GQ5VZR2 741 aa29.16■■■□□ 2.26
RAPGEF1-203ENST00000372195 CCDC7Q96M83 1385 aa29.16■■■□□ 2.26
RAPGEF1-203ENST00000372195 MSH5O43196 834 aa29.16■■■□□ 2.26
RAPGEF1-203ENST00000372195 NFKBIBQ15653 356 aa29.16■■■□□ 2.26
RAPGEF1-203ENST00000372195 GGNBP2Q9H3C7 697 aa29.15■■■□□ 2.26
RAPGEF1-203ENST00000372195 TSPYL4Q9UJ04 414 aa29.15■■■□□ 2.26
RAPGEF1-203ENST00000372195 CPLX1O14810 134 aa29.15■■■□□ 2.26
RAPGEF1-203ENST00000372195 CDCA7LQ96GN5 454 aa29.15■■■□□ 2.26
RAPGEF1-203ENST00000372195 TPM2P07951 284 aa29.14■■■□□ 2.26
RAPGEF1-203ENST00000372195 NFXL1Q6ZNB6 911 aa29.14■■■□□ 2.26
RAPGEF1-203ENST00000372195 HOMER1Q86YM7 354 aa29.14■■■□□ 2.26
RAPGEF1-203ENST00000372195 TPM1P09493 284 aa29.14■■■□□ 2.26
RAPGEF1-203ENST00000372195 AIMP1Q12904 312 aaKnown RBP29.14■■■□□ 2.26
RAPGEF1-203ENST00000372195 SMC3Q9UQE7 1217 aa29.14■■■□□ 2.25
RAPGEF1-203ENST00000372195 CABP2Q9NPB3 220 aa29.14■■■□□ 2.25
RAPGEF1-203ENST00000372195 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
RAPGEF1-203ENST00000372195 INTS3Q68E01 1043 aaKnown RBP29.13■■■□□ 2.25
RAPGEF1-203ENST00000372195 API5Q9BZZ5 524 aaKnown RBP29.13■■■□□ 2.25
RAPGEF1-203ENST00000372195 G3BP1Q13283 466 aaKnown RBP eCLIP29.12■■■□□ 2.25
RAPGEF1-203ENST00000372195 DHX16O60231 1041 aaKnown RBP29.1■■■□□ 2.25
RAPGEF1-203ENST00000372195 SETQ01105 290 aaPredicted RBP29.1■■■□□ 2.25
RAPGEF1-203ENST00000372195 ADAMTS8Q9UP79 889 aa29.09■■■□□ 2.25
RAPGEF1-203ENST00000372195 FBXO3Q9UK99 471 aa29.08■■■□□ 2.25
RAPGEF1-203ENST00000372195 CCDC27Q2M243 656 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 TMEM132EQ6IEE7 984 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 ZNF428Q96B54 188 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 SASS6Q6UVJ0 657 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 PSME1Q06323 249 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 RNF214Q8ND24 703 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 CNTLNQ9NXG0 1405 aa29.07■■■□□ 2.24
RAPGEF1-203ENST00000372195 FYB1O15117 783 aa29.06■■■□□ 2.24
RAPGEF1-203ENST00000372195 C1orf115Q9H7X2 142 aa29.06■■■□□ 2.24
RAPGEF1-203ENST00000372195 VPS37DQ86XT2 251 aa29.06■■■□□ 2.24
RAPGEF1-203ENST00000372195 FAM43AQ8N2R8 423 aa29.06■■■□□ 2.24
RAPGEF1-203ENST00000372195 PRDM2Q13029 1718 aa29.05■■■□□ 2.24
RAPGEF1-203ENST00000372195 NEUROD6Q96NK8 337 aa29.05■■■□□ 2.24
RAPGEF1-203ENST00000372195 IFT57Q9NWB7 429 aa29.05■■■□□ 2.24
RAPGEF1-203ENST00000372195 CPLX2Q6PUV4 134 aaKnown RBP29.04■■■□□ 2.24
RAPGEF1-203ENST00000372195 SAMD1Q6SPF0 538 aaPredicted RBP29.03■■■□□ 2.24
RAPGEF1-203ENST00000372195 WASHC2AQ641Q2 1341 aa29.03■■■□□ 2.24
RAPGEF1-203ENST00000372195 R3HCC1Q9Y3T6 440 aaKnown RBP29.03■■■□□ 2.24
RAPGEF1-203ENST00000372195 RNF20Q5VTR2 975 aa29.03■■■□□ 2.24
RAPGEF1-203ENST00000372195 NOL10Q9BSC4 688 aaKnown RBP29.02■■■□□ 2.24
RAPGEF1-203ENST00000372195 TRDNQ13061 729 aa29.02■■■□□ 2.24
RAPGEF1-203ENST00000372195 PTPRGP23470 1445 aa29.01■■■□□ 2.24
RAPGEF1-203ENST00000372195 ROCK1Q13464 1354 aa29.01■■■□□ 2.24
RAPGEF1-203ENST00000372195 TRIM34Q9BYJ4 488 aa29.01■■■□□ 2.23
RAPGEF1-203ENST00000372195 CCDC70Q6NSX1 233 aa29.01■■■□□ 2.23
RAPGEF1-203ENST00000372195 MTMR7Q9Y216 660 aa29.01■■■□□ 2.23
RAPGEF1-203ENST00000372195 DDX58O95786 925 aaKnown RBP29■■■□□ 2.23
RAPGEF1-203ENST00000372195 RIC3Q7Z5B4 369 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 AMOTL1Q8IY63 956 aa28.99■■■□□ 2.23
RAPGEF1-203ENST00000372195 GNAI1P63096 354 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms