RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
RAPGEF1-201ENST00000372189 MSH5O43196 834 aa16.54■□□□□ 0.24
RAPGEF1-201ENST00000372189 GOLGA6L1Q8N7Z2 621 aa16.54■□□□□ 0.24
RAPGEF1-201ENST00000372189 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
RAPGEF1-201ENST00000372189 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
RAPGEF1-201ENST00000372189 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
RAPGEF1-201ENST00000372189 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF1-201ENST00000372189 MIA2Q96PC5 1412 aa16.52■□□□□ 0.24
RAPGEF1-201ENST00000372189 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
RAPGEF1-201ENST00000372189 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
RAPGEF1-201ENST00000372189 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-201ENST00000372189 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
RAPGEF1-201ENST00000372189 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
RAPGEF1-201ENST00000372189 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF1-201ENST00000372189 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
RAPGEF1-201ENST00000372189 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
RAPGEF1-201ENST00000372189 GNL2Q13823 731 aaKnown RBP16.49■□□□□ 0.23
RAPGEF1-201ENST00000372189 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF1-201ENST00000372189 CABP2Q9NPB3 220 aa16.48■□□□□ 0.23
RAPGEF1-201ENST00000372189 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
RAPGEF1-201ENST00000372189 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
RAPGEF1-201ENST00000372189 TRIM6-TRIM34B2RNG4 842 aa16.46■□□□□ 0.23
RAPGEF1-201ENST00000372189 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF1-201ENST00000372189 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
RAPGEF1-201ENST00000372189 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
RAPGEF1-201ENST00000372189 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
RAPGEF1-201ENST00000372189 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
RAPGEF1-201ENST00000372189 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
RAPGEF1-201ENST00000372189 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
RAPGEF1-201ENST00000372189 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
RAPGEF1-201ENST00000372189 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
RAPGEF1-201ENST00000372189 NEXNQ0ZGT2 675 aa16.44■□□□□ 0.22
RAPGEF1-201ENST00000372189 E9PSI1 815 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 NLRP6P59044 892 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 NLRP2Q9NX02 1062 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 CUL7Q14999 1698 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
RAPGEF1-201ENST00000372189 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-201ENST00000372189 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
RAPGEF1-201ENST00000372189 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
RAPGEF1-201ENST00000372189 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
RAPGEF1-201ENST00000372189 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF1-201ENST00000372189 RIPK4P57078 832 aa16.41■□□□□ 0.22
RAPGEF1-201ENST00000372189 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 DDX11L8A8MPP1 907 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 ZNF771Q7L3S4 317 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
RAPGEF1-201ENST00000372189 CLSTN1O94985 981 aa16.39■□□□□ 0.21
RAPGEF1-201ENST00000372189 GSE1Q14687 1217 aa16.39■□□□□ 0.21
RAPGEF1-201ENST00000372189 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
RAPGEF1-201ENST00000372189 CSPP1Q1MSJ5 1256 aa16.39■□□□□ 0.21
RAPGEF1-201ENST00000372189 CDK13Q14004 1512 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-201ENST00000372189 APAF1O14727 1248 aa16.38■□□□□ 0.21
RAPGEF1-201ENST00000372189 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-201ENST00000372189 EPRSP07814 1512 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-201ENST00000372189 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 TPM4P67936 248 aa16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 PDE4AP27815 886 aa16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 CENPQQ7L2Z9 268 aaPredicted RBP16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 C9orf78Q9NZ63 289 aaPredicted RBP16.37■□□□□ 0.21
RAPGEF1-201ENST00000372189 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 DAPK1P53355 1430 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 PHF14O94880 888 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 HMOX1P09601 288 aa16.36■□□□□ 0.21
RAPGEF1-201ENST00000372189 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
RAPGEF1-201ENST00000372189 KIAA1107Q9UPP5 1409 aa16.35■□□□□ 0.21
RAPGEF1-201ENST00000372189 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
RAPGEF1-201ENST00000372189 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
RAPGEF1-201ENST00000372189 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
RAPGEF1-201ENST00000372189 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
RAPGEF1-201ENST00000372189 KIF7Q2M1P5 1343 aa16.33■□□□□ 0.21
RAPGEF1-201ENST00000372189 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
RAPGEF1-201ENST00000372189 CCDC7Q96M83 1385 aa16.33■□□□□ 0.2
RAPGEF1-201ENST00000372189 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
RAPGEF1-201ENST00000372189 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
RAPGEF1-201ENST00000372189 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
RAPGEF1-201ENST00000372189 GNAI1P63096 354 aa16.32■□□□□ 0.2
RAPGEF1-201ENST00000372189 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
RAPGEF1-201ENST00000372189 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 KIF14Q15058 1648 aa16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 ST18O60284 1047 aa16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms