RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 TET3O43151 1660 aa21.75■■□□□ 1.07
EDF1-202ENST00000371648 TMEM94Q12767 1356 aa21.75■■□□□ 1.07
EDF1-202ENST00000371648 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
EDF1-202ENST00000371648 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
EDF1-202ENST00000371648 UNC13BO14795 1591 aa21.73■■□□□ 1.07
EDF1-202ENST00000371648 NUP155O75694 1391 aa21.72■■□□□ 1.07
EDF1-202ENST00000371648 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
EDF1-202ENST00000371648 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
EDF1-202ENST00000371648 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
EDF1-202ENST00000371648 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
EDF1-202ENST00000371648 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
EDF1-202ENST00000371648 PLEKHG1Q9ULL1 1385 aa21.69■■□□□ 1.06
EDF1-202ENST00000371648 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
EDF1-202ENST00000371648 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
EDF1-202ENST00000371648 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
EDF1-202ENST00000371648 E9PCH4 1651 aa21.66■■□□□ 1.06
EDF1-202ENST00000371648 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
EDF1-202ENST00000371648 FAM135BQ49AJ0 1406 aa21.65■■□□□ 1.06
EDF1-202ENST00000371648 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
EDF1-202ENST00000371648 IQGAP3Q86VI3 1631 aa21.65■■□□□ 1.06
EDF1-202ENST00000371648 NAIPQ13075 1403 aa21.64■■□□□ 1.06
EDF1-202ENST00000371648 TBX22Q9Y458 520 aa21.64■■□□□ 1.05
EDF1-202ENST00000371648 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
EDF1-202ENST00000371648 NWD1Q149M9 1564 aa21.62■■□□□ 1.05
EDF1-202ENST00000371648 MSH6P52701 1360 aa21.61■■□□□ 1.05
EDF1-202ENST00000371648 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
EDF1-202ENST00000371648 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
EDF1-202ENST00000371648 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
EDF1-202ENST00000371648 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
EDF1-202ENST00000371648 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
EDF1-202ENST00000371648 ROBO1Q9Y6N7 1651 aa21.55■■□□□ 1.04
EDF1-202ENST00000371648 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
EDF1-202ENST00000371648 RGS17Q9UGC6 210 aaPredicted RBP21.52■■□□□ 1.04
EDF1-202ENST00000371648 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
EDF1-202ENST00000371648 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
EDF1-202ENST00000371648 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
EDF1-202ENST00000371648 DIP2AQ14689 1571 aa21.49■■□□□ 1.03
EDF1-202ENST00000371648 NCOA3Q9Y6Q9 1424 aa21.49■■□□□ 1.03
EDF1-202ENST00000371648 ATF3P18847 181 aa21.48■■□□□ 1.03
EDF1-202ENST00000371648 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
EDF1-202ENST00000371648 PTPRUQ92729 1446 aa21.47■■□□□ 1.03
EDF1-202ENST00000371648 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
EDF1-202ENST00000371648 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
EDF1-202ENST00000371648 TRPM2O94759 1503 aa21.46■■□□□ 1.03
EDF1-202ENST00000371648 CADPS2Q86UW7 1296 aa21.46■■□□□ 1.03
EDF1-202ENST00000371648 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
EDF1-202ENST00000371648 PHLPP1O60346 1717 aa21.42■■□□□ 1.02
EDF1-202ENST00000371648 JCADQ9P266 1359 aa21.42■■□□□ 1.02
EDF1-202ENST00000371648 METP08581 1390 aa21.41■■□□□ 1.02
EDF1-202ENST00000371648 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
EDF1-202ENST00000371648 MPHOSPH9Q99550 1183 aa21.41■■□□□ 1.02
EDF1-202ENST00000371648 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
EDF1-202ENST00000371648 CLTCL1P53675 1640 aa21.4■■□□□ 1.02
EDF1-202ENST00000371648 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
EDF1-202ENST00000371648 SETBP1Q9Y6X0 1596 aa21.4■■□□□ 1.02
EDF1-202ENST00000371648 RAB3GAP2Q9H2M9 1393 aa21.38■■□□□ 1.01
EDF1-202ENST00000371648 FOXD1Q16676 465 aa21.38■■□□□ 1.01
EDF1-202ENST00000371648 NEXMIFQ5QGS0 1516 aa21.36■■□□□ 1.01
EDF1-202ENST00000371648 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
EDF1-202ENST00000371648 COL16A1Q07092 1604 aaPredicted RBP21.34■■□□□ 1.01
EDF1-202ENST00000371648 XRN1Q8IZH2 1706 aaKnown RBP21.33■■□□□ 1.01
EDF1-202ENST00000371648 VGFO15240 615 aaPredicted RBP21.33■■□□□ 1.01
EDF1-202ENST00000371648 DCCP43146 1447 aa21.31■■□□□ 1
EDF1-202ENST00000371648 MEX3CQ5U5Q3 659 aaKnown RBP21.31■■□□□ 1
EDF1-202ENST00000371648 KIF1BO60333 1816 aa21.31■■□□□ 1
EDF1-202ENST00000371648 SPATA31A6Q5VVP1 1343 aa21.3■■□□□ 1
EDF1-202ENST00000371648 AHDC1Q5TGY3 1603 aaPredicted RBP21.3■■□□□ 1
EDF1-202ENST00000371648 HRCP23327 699 aa21.29■■□□□ 1
EDF1-202ENST00000371648 MST1RQ04912 1400 aa21.29■■□□□ 1
EDF1-202ENST00000371648 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
EDF1-202ENST00000371648 LRP6O75581 1613 aa21.27■■□□□ 1
EDF1-202ENST00000371648 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
EDF1-202ENST00000371648 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
EDF1-202ENST00000371648 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
EDF1-202ENST00000371648 ADGRL3Q9HAR2 1447 aa21.27■■□□□ 1
EDF1-202ENST00000371648 ASXL1Q8IXJ9 1541 aa21.25■□□□□ 0.99
EDF1-202ENST00000371648 DDX17Q92841 729 aaKnown RBP21.25■□□□□ 0.99
EDF1-202ENST00000371648 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
EDF1-202ENST00000371648 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
EDF1-202ENST00000371648 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
EDF1-202ENST00000371648 RGL3Q3MIN7 710 aa21.22■□□□□ 0.99
EDF1-202ENST00000371648 ZNF772Q68DY9 489 aaPredicted RBP21.21■□□□□ 0.99
EDF1-202ENST00000371648 LRRC59Q96AG4 307 aaKnown RBP21.21■□□□□ 0.99
EDF1-202ENST00000371648 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
EDF1-202ENST00000371648 PTCH1Q13635 1447 aa21.2■□□□□ 0.98
EDF1-202ENST00000371648 NALCNQ8IZF0 1738 aa21.19■□□□□ 0.98
EDF1-202ENST00000371648 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
EDF1-202ENST00000371648 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
EDF1-202ENST00000371648 ORAI2Q96SN7 254 aa21.17■□□□□ 0.98
EDF1-202ENST00000371648 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
EDF1-202ENST00000371648 PPLO60437 1756 aa21.15■□□□□ 0.98
EDF1-202ENST00000371648 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
EDF1-202ENST00000371648 STK26Q9P289 416 aa21.15■□□□□ 0.98
EDF1-202ENST00000371648 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
EDF1-202ENST00000371648 AFF2P51816 1311 aa21.13■□□□□ 0.97
EDF1-202ENST00000371648 SPATA31E1Q6ZUB1 1445 aa21.12■□□□□ 0.97
EDF1-202ENST00000371648 RXRBP28702 533 aa21.12■□□□□ 0.97
EDF1-202ENST00000371648 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
EDF1-202ENST00000371648 C8orf37Q96NL8 207 aa21.11■□□□□ 0.97
EDF1-202ENST00000371648 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms