RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
SCP2-201ENST00000371509 UHRF1BP1Q6BDS2 1440 aa23.55■■□□□ 1.36
SCP2-201ENST00000371509 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
SCP2-201ENST00000371509 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
SCP2-201ENST00000371509 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
SCP2-201ENST00000371509 RIMS2Q9UQ26 1411 aa23.49■■□□□ 1.35
SCP2-201ENST00000371509 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
SCP2-201ENST00000371509 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
SCP2-201ENST00000371509 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
SCP2-201ENST00000371509 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
SCP2-201ENST00000371509 ZFYVE9O95405 1425 aa23.47■■□□□ 1.35
SCP2-201ENST00000371509 MYOM2P54296 1465 aa23.46■■□□□ 1.35
SCP2-201ENST00000371509 PRAG1Q86YV5 1406 aa23.45■■□□□ 1.34
SCP2-201ENST00000371509 SLIT1O75093 1534 aa23.44■■□□□ 1.34
SCP2-201ENST00000371509 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
SCP2-201ENST00000371509 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
SCP2-201ENST00000371509 LTKP29376 864 aa23.43■■□□□ 1.34
SCP2-201ENST00000371509 MIER1Q8N108 512 aa23.43■■□□□ 1.34
SCP2-201ENST00000371509 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
SCP2-201ENST00000371509 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
SCP2-201ENST00000371509 NRXN1Q9ULB1 1477 aa23.41■■□□□ 1.34
SCP2-201ENST00000371509 HSPA2P54652 639 aa23.4■■□□□ 1.34
SCP2-201ENST00000371509 STAC3Q96MF2 364 aa23.4■■□□□ 1.34
SCP2-201ENST00000371509 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.34
SCP2-201ENST00000371509 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
SCP2-201ENST00000371509 TRPM1Q7Z4N2 1603 aa23.39■■□□□ 1.33
SCP2-201ENST00000371509 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
SCP2-201ENST00000371509 EID1Q9Y6B2 187 aa23.38■■□□□ 1.33
SCP2-201ENST00000371509 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
SCP2-201ENST00000371509 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
SCP2-201ENST00000371509 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
SCP2-201ENST00000371509 IQGAP1P46940 1657 aa23.34■■□□□ 1.33
SCP2-201ENST00000371509 ANKLE2Q86XL3 938 aa23.34■■□□□ 1.33
SCP2-201ENST00000371509 BCANQ96GW7 911 aa23.34■■□□□ 1.33
SCP2-201ENST00000371509 POLR1AO95602 1720 aaPredicted RBP23.34■■□□□ 1.33
SCP2-201ENST00000371509 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
SCP2-201ENST00000371509 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
SCP2-201ENST00000371509 NCKAP5LQ9HCH0 1330 aa23.31■■□□□ 1.32
SCP2-201ENST00000371509 ROCK2O75116 1388 aaKnown RBP23.31■■□□□ 1.32
SCP2-201ENST00000371509 KIAA1210Q9ULL0 1709 aa23.31■■□□□ 1.32
SCP2-201ENST00000371509 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
SCP2-201ENST00000371509 C14orf93Q9H972 538 aaKnown RBP23.3■■□□□ 1.32
SCP2-201ENST00000371509 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
SCP2-201ENST00000371509 SETBP1Q9Y6X0 1596 aa23.3■■□□□ 1.32
SCP2-201ENST00000371509 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
SCP2-201ENST00000371509 LAMC1P11047 1609 aa23.27■■□□□ 1.32
SCP2-201ENST00000371509 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
SCP2-201ENST00000371509 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
SCP2-201ENST00000371509 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
SCP2-201ENST00000371509 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
SCP2-201ENST00000371509 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
SCP2-201ENST00000371509 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
SCP2-201ENST00000371509 ADGRB1O14514 1584 aa23.24■■□□□ 1.31
SCP2-201ENST00000371509 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
SCP2-201ENST00000371509 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
SCP2-201ENST00000371509 MED14O60244 1454 aa23.22■■□□□ 1.31
SCP2-201ENST00000371509 METP08581 1390 aa23.22■■□□□ 1.31
SCP2-201ENST00000371509 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
SCP2-201ENST00000371509 HSPA5P11021 654 aaKnown RBP23.22■■□□□ 1.31
SCP2-201ENST00000371509 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
SCP2-201ENST00000371509 EIF4G2P78344 907 aaKnown RBP eCLIP23.2■■□□□ 1.3
SCP2-201ENST00000371509 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
SCP2-201ENST00000371509 STK26Q9P289 416 aa23.17■■□□□ 1.3
SCP2-201ENST00000371509 USP47Q96K76 1375 aa23.17■■□□□ 1.3
SCP2-201ENST00000371509 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
SCP2-201ENST00000371509 TRAK1Q9UPV9 953 aa23.16■■□□□ 1.3
SCP2-201ENST00000371509 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
SCP2-201ENST00000371509 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.3
SCP2-201ENST00000371509 CENPBP07199 599 aaPredicted RBP23.12■■□□□ 1.29
SCP2-201ENST00000371509 PTPRUQ92729 1446 aa23.12■■□□□ 1.29
SCP2-201ENST00000371509 WASHC2AQ641Q2 1341 aa23.1■■□□□ 1.29
SCP2-201ENST00000371509 ARHGEF28Q8N1W1 1705 aaKnown RBP23.1■■□□□ 1.29
SCP2-201ENST00000371509 LRPPRCP42704 1394 aaKnown RBP23.1■■□□□ 1.29
SCP2-201ENST00000371509 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
SCP2-201ENST00000371509 CHD2O14647 1828 aaKnown RBP23.07■■□□□ 1.28
SCP2-201ENST00000371509 AMOTL2Q9Y2J4 779 aa23.07■■□□□ 1.28
SCP2-201ENST00000371509 KNDC1Q76NI1 1749 aa23.06■■□□□ 1.28
SCP2-201ENST00000371509 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
SCP2-201ENST00000371509 CCDC7Q96M83 1385 aa23.05■■□□□ 1.28
SCP2-201ENST00000371509 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
SCP2-201ENST00000371509 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
SCP2-201ENST00000371509 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
SCP2-201ENST00000371509 XRN1Q8IZH2 1706 aaKnown RBP23.04■■□□□ 1.28
SCP2-201ENST00000371509 KCNA6P17658 529 aa23.03■■□□□ 1.28
SCP2-201ENST00000371509 WAPLQ7Z5K2 1190 aa23.03■■□□□ 1.28
SCP2-201ENST00000371509 PRAM1Q96QH2 718 aa23.03■■□□□ 1.28
SCP2-201ENST00000371509 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
SCP2-201ENST00000371509 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
SCP2-201ENST00000371509 CPS1P31327 1500 aa23.02■■□□□ 1.28
SCP2-201ENST00000371509 QRICH2Q9H0J4 1663 aa23.02■■□□□ 1.28
SCP2-201ENST00000371509 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
SCP2-201ENST00000371509 DLC1Q96QB1 1528 aa23.01■■□□□ 1.27
SCP2-201ENST00000371509 TECPR2O15040 1411 aa23.01■■□□□ 1.27
SCP2-201ENST00000371509 CENPJQ9HC77 1338 aaPredicted RBP23.01■■□□□ 1.27
SCP2-201ENST00000371509 STRCP1A6NGW2 1772 aa23.01■■□□□ 1.27
SCP2-201ENST00000371509 POGKQ9P215 609 aa23■■□□□ 1.27
SCP2-201ENST00000371509 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
SCP2-201ENST00000371509 TESK2Q96S53 571 aa22.98■■□□□ 1.27
SCP2-201ENST00000371509 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
SCP2-201ENST00000371509 NWD1Q149M9 1564 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms