RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
LRRC40-201ENST00000370952 PTPRGP23470 1445 aa12.4□□□□□ -0.43
LRRC40-201ENST00000370952 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.43
LRRC40-201ENST00000370952 CANXP27824 592 aaKnown RBP12.4□□□□□ -0.43
LRRC40-201ENST00000370952 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.43
LRRC40-201ENST00000370952 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.43
LRRC40-201ENST00000370952 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
LRRC40-201ENST00000370952 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
LRRC40-201ENST00000370952 TRMT2AQ8IZ69 625 aaKnown RBP12.38□□□□□ -0.43
LRRC40-201ENST00000370952 CLUAP1Q96AJ1 413 aa12.38□□□□□ -0.43
LRRC40-201ENST00000370952 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
LRRC40-201ENST00000370952 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
LRRC40-201ENST00000370952 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
LRRC40-201ENST00000370952 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
LRRC40-201ENST00000370952 GLIPR1L2Q4G1C9 344 aa12.36□□□□□ -0.43
LRRC40-201ENST00000370952 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
LRRC40-201ENST00000370952 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
LRRC40-201ENST00000370952 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
LRRC40-201ENST00000370952 UPF2Q9HAU5 1272 aaKnown RBP12.36□□□□□ -0.43
LRRC40-201ENST00000370952 PLA2R1Q13018 1463 aa12.36□□□□□ -0.43
LRRC40-201ENST00000370952 MCM4P33991 863 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 FSD2A1L4K1 749 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 CLCN1P35523 988 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
LRRC40-201ENST00000370952 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
LRRC40-201ENST00000370952 E9PSI1 815 aa12.34□□□□□ -0.43
LRRC40-201ENST00000370952 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
LRRC40-201ENST00000370952 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
LRRC40-201ENST00000370952 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
LRRC40-201ENST00000370952 LAMC1P11047 1609 aa12.33□□□□□ -0.44
LRRC40-201ENST00000370952 PDE3AQ14432 1141 aa12.33□□□□□ -0.44
LRRC40-201ENST00000370952 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
LRRC40-201ENST00000370952 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
LRRC40-201ENST00000370952 TRAK2O60296 914 aa12.32□□□□□ -0.44
LRRC40-201ENST00000370952 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
LRRC40-201ENST00000370952 BCL2L13Q9BXK5 485 aa12.32□□□□□ -0.44
LRRC40-201ENST00000370952 ABCC10Q5T3U5 1492 aa12.31□□□□□ -0.44
LRRC40-201ENST00000370952 RLBP1P12271 317 aa12.3□□□□□ -0.44
LRRC40-201ENST00000370952 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
LRRC40-201ENST00000370952 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
LRRC40-201ENST00000370952 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
LRRC40-201ENST00000370952 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
LRRC40-201ENST00000370952 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
LRRC40-201ENST00000370952 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
LRRC40-201ENST00000370952 GRIN2AQ12879 1464 aa12.29□□□□□ -0.44
LRRC40-201ENST00000370952 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
LRRC40-201ENST00000370952 CCDC141Q6ZP82 1450 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
LRRC40-201ENST00000370952 MRE11P49959 708 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 FBLN2P98095 1184 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
LRRC40-201ENST00000370952 WWC1Q8IX03 1113 aa12.27□□□□□ -0.45
LRRC40-201ENST00000370952 ESPNB1AK53 854 aa12.26□□□□□ -0.45
LRRC40-201ENST00000370952 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
LRRC40-201ENST00000370952 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
LRRC40-201ENST00000370952 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
LRRC40-201ENST00000370952 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
LRRC40-201ENST00000370952 SYNMO15061 1565 aa12.25□□□□□ -0.45
LRRC40-201ENST00000370952 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
LRRC40-201ENST00000370952 NUP160Q12769 1436 aa12.25□□□□□ -0.45
LRRC40-201ENST00000370952 ATP10BO94823 1461 aa12.25□□□□□ -0.45
LRRC40-201ENST00000370952 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
LRRC40-201ENST00000370952 SAMD9LQ8IVG5 1584 aa12.24□□□□□ -0.45
LRRC40-201ENST00000370952 MYOM1P52179 1685 aa12.24□□□□□ -0.45
LRRC40-201ENST00000370952 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
LRRC40-201ENST00000370952 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
LRRC40-201ENST00000370952 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
LRRC40-201ENST00000370952 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
LRRC40-201ENST00000370952 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
LRRC40-201ENST00000370952 GAS2L3Q86XJ1 694 aa12.23□□□□□ -0.45
LRRC40-201ENST00000370952 CHMP7Q8WUX9 453 aaPredicted RBP12.23□□□□□ -0.45
LRRC40-201ENST00000370952 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
LRRC40-201ENST00000370952 ABCA8O94911 1581 aa12.22□□□□□ -0.45
LRRC40-201ENST00000370952 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
LRRC40-201ENST00000370952 UNC13BO14795 1591 aa12.22□□□□□ -0.45
LRRC40-201ENST00000370952 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
LRRC40-201ENST00000370952 PLXNC1O60486 1568 aa12.21□□□□□ -0.45
LRRC40-201ENST00000370952 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
LRRC40-201ENST00000370952 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.45
LRRC40-201ENST00000370952 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
LRRC40-201ENST00000370952 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
LRRC40-201ENST00000370952 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
LRRC40-201ENST00000370952 SYCP2Q9BX26 1530 aa12.2□□□□□ -0.46
LRRC40-201ENST00000370952 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
LRRC40-201ENST00000370952 IQGAP3Q86VI3 1631 aa12.19□□□□□ -0.46
LRRC40-201ENST00000370952 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
LRRC40-201ENST00000370952 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
LRRC40-201ENST00000370952 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
LRRC40-201ENST00000370952 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
LRRC40-201ENST00000370952 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
LRRC40-201ENST00000370952 SCAF11Q99590 1463 aaKnown RBP12.19□□□□□ -0.46
LRRC40-201ENST00000370952 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
LRRC40-201ENST00000370952 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms