RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 ZFYVE9O95405 1425 aa20.26■□□□□ 0.83
RPF1-201ENST00000370654 E9PCH4 1651 aa20.26■□□□□ 0.83
RPF1-201ENST00000370654 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
RPF1-201ENST00000370654 TMEM94Q12767 1356 aa20.25■□□□□ 0.83
RPF1-201ENST00000370654 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
RPF1-201ENST00000370654 RIMS2Q9UQ26 1411 aa20.23■□□□□ 0.83
RPF1-201ENST00000370654 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
RPF1-201ENST00000370654 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
RPF1-201ENST00000370654 NUP155O75694 1391 aa20.21■□□□□ 0.83
RPF1-201ENST00000370654 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
RPF1-201ENST00000370654 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
RPF1-201ENST00000370654 BCANQ96GW7 911 aa20.21■□□□□ 0.83
RPF1-201ENST00000370654 NWD1Q149M9 1564 aa20.19■□□□□ 0.82
RPF1-201ENST00000370654 PLEKHG1Q9ULL1 1385 aa20.19■□□□□ 0.82
RPF1-201ENST00000370654 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
RPF1-201ENST00000370654 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.82
RPF1-201ENST00000370654 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.82
RPF1-201ENST00000370654 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.82
RPF1-201ENST00000370654 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
RPF1-201ENST00000370654 TBX22Q9Y458 520 aa20.11■□□□□ 0.81
RPF1-201ENST00000370654 ROBO1Q9Y6N7 1651 aa20.11■□□□□ 0.81
RPF1-201ENST00000370654 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
RPF1-201ENST00000370654 HDGFP51858 240 aaKnown RBP20.09■□□□□ 0.81
RPF1-201ENST00000370654 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
RPF1-201ENST00000370654 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
RPF1-201ENST00000370654 RGS17Q9UGC6 210 aaPredicted RBP20.08■□□□□ 0.81
RPF1-201ENST00000370654 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
RPF1-201ENST00000370654 MSH6P52701 1360 aa20.06■□□□□ 0.8
RPF1-201ENST00000370654 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
RPF1-201ENST00000370654 NAIPQ13075 1403 aa20.05■□□□□ 0.8
RPF1-201ENST00000370654 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
RPF1-201ENST00000370654 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
RPF1-201ENST00000370654 CLTCL1P53675 1640 aa20.02■□□□□ 0.79
RPF1-201ENST00000370654 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
RPF1-201ENST00000370654 AMOTL2Q9Y2J4 779 aa20.01■□□□□ 0.79
RPF1-201ENST00000370654 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
RPF1-201ENST00000370654 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
RPF1-201ENST00000370654 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
RPF1-201ENST00000370654 TRPM2O94759 1503 aa19.98■□□□□ 0.79
RPF1-201ENST00000370654 METP08581 1390 aa19.97■□□□□ 0.79
RPF1-201ENST00000370654 C14orf37Q86TY3 774 aa19.97■□□□□ 0.79
RPF1-201ENST00000370654 PHLPP1O60346 1717 aa19.97■□□□□ 0.79
RPF1-201ENST00000370654 NCOA3Q9Y6Q9 1424 aa19.97■□□□□ 0.79
RPF1-201ENST00000370654 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
RPF1-201ENST00000370654 NEXMIFQ5QGS0 1516 aa19.96■□□□□ 0.79
RPF1-201ENST00000370654 POTEAQ6S8J7 498 aa19.95■□□□□ 0.79
RPF1-201ENST00000370654 C19orf44Q9H6X5 657 aa19.95■□□□□ 0.78
RPF1-201ENST00000370654 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
RPF1-201ENST00000370654 HFM1A2PYH4 1435 aa19.94■□□□□ 0.78
RPF1-201ENST00000370654 TRIM52Q96A61 297 aa19.94■□□□□ 0.78
RPF1-201ENST00000370654 COL16A1Q07092 1604 aaPredicted RBP19.93■□□□□ 0.78
RPF1-201ENST00000370654 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
RPF1-201ENST00000370654 ATF3P18847 181 aa19.9■□□□□ 0.78
RPF1-201ENST00000370654 JCADQ9P266 1359 aa19.9■□□□□ 0.78
RPF1-201ENST00000370654 FOXD1Q16676 465 aa19.89■□□□□ 0.77
RPF1-201ENST00000370654 BRINP3Q76B58 766 aa19.88■□□□□ 0.77
RPF1-201ENST00000370654 LRP6O75581 1613 aa19.88■□□□□ 0.77
RPF1-201ENST00000370654 KIF1BO60333 1816 aa19.88■□□□□ 0.77
RPF1-201ENST00000370654 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
RPF1-201ENST00000370654 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
RPF1-201ENST00000370654 MST1RQ04912 1400 aa19.85■□□□□ 0.77
RPF1-201ENST00000370654 SETD1AO15047 1707 aaKnown RBP19.83■□□□□ 0.77
RPF1-201ENST00000370654 DDX17Q92841 729 aaKnown RBP19.83■□□□□ 0.76
RPF1-201ENST00000370654 DCCP43146 1447 aa19.82■□□□□ 0.76
RPF1-201ENST00000370654 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
RPF1-201ENST00000370654 NALCNQ8IZF0 1738 aa19.81■□□□□ 0.76
RPF1-201ENST00000370654 ADGRL3Q9HAR2 1447 aa19.8■□□□□ 0.76
RPF1-201ENST00000370654 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
RPF1-201ENST00000370654 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
RPF1-201ENST00000370654 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
RPF1-201ENST00000370654 PPLO60437 1756 aa19.78■□□□□ 0.76
RPF1-201ENST00000370654 SPATA31A6Q5VVP1 1343 aa19.78■□□□□ 0.76
RPF1-201ENST00000370654 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
RPF1-201ENST00000370654 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
RPF1-201ENST00000370654 NHSL1Q5SYE7 1610 aa19.75■□□□□ 0.75
RPF1-201ENST00000370654 NUTM2BA6NNL0 878 aaPredicted RBP19.75■□□□□ 0.75
RPF1-201ENST00000370654 NUTM2EB1AL46 878 aaPredicted RBP19.75■□□□□ 0.75
RPF1-201ENST00000370654 NUTM2AQ8IVF1 878 aaPredicted RBP19.75■□□□□ 0.75
RPF1-201ENST00000370654 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
RPF1-201ENST00000370654 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
RPF1-201ENST00000370654 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
RPF1-201ENST00000370654 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
RPF1-201ENST00000370654 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
RPF1-201ENST00000370654 MEX3CQ5U5Q3 659 aaKnown RBP19.73■□□□□ 0.75
RPF1-201ENST00000370654 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
RPF1-201ENST00000370654 ORAI2Q96SN7 254 aa19.71■□□□□ 0.75
RPF1-201ENST00000370654 PRAG1Q86YV5 1406 aa19.7■□□□□ 0.74
RPF1-201ENST00000370654 CCDC144AA2RUR9 1427 aa19.7■□□□□ 0.74
RPF1-201ENST00000370654 PNPLA6Q8IY17 1366 aa19.68■□□□□ 0.74
RPF1-201ENST00000370654 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
RPF1-201ENST00000370654 IFT172Q9UG01 1749 aa19.66■□□□□ 0.74
RPF1-201ENST00000370654 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
RPF1-201ENST00000370654 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
RPF1-201ENST00000370654 WAPLQ7Z5K2 1190 aa19.66■□□□□ 0.74
RPF1-201ENST00000370654 STK26Q9P289 416 aa19.66■□□□□ 0.74
RPF1-201ENST00000370654 AFF2P51816 1311 aa19.64■□□□□ 0.73
RPF1-201ENST00000370654 PLEKHH1Q9ULM0 1364 aa19.64■□□□□ 0.73
RPF1-201ENST00000370654 LAMC1P11047 1609 aa19.64■□□□□ 0.73
RPF1-201ENST00000370654 SOS2Q07890 1332 aaPredicted RBP19.62■□□□□ 0.73
RPF1-201ENST00000370654 PIK3C2GO75747 1445 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms