RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 MYO5BQ9ULV0 1848 aa28.41■■■□□ 2.14
NPM3-201ENST00000370110 RGS17Q9UGC6 210 aaPredicted RBP28.4■■■□□ 2.14
NPM3-201ENST00000370110 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
NPM3-201ENST00000370110 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.14
NPM3-201ENST00000370110 ROBO1Q9Y6N7 1651 aa28.38■■■□□ 2.13
NPM3-201ENST00000370110 ZFYVE9O95405 1425 aa28.38■■■□□ 2.13
NPM3-201ENST00000370110 PROSER2Q86WR7 435 aaPredicted RBP28.38■■■□□ 2.13
NPM3-201ENST00000370110 NKTRP30414 1462 aaKnown RBP28.37■■■□□ 2.13
NPM3-201ENST00000370110 GCC2Q8IWJ2 1684 aa28.37■■■□□ 2.13
NPM3-201ENST00000370110 TMEM131LA2VDJ0 1609 aa28.34■■■□□ 2.13
NPM3-201ENST00000370110 UNC13BO14795 1591 aa28.33■■■□□ 2.13
NPM3-201ENST00000370110 ROCK1Q13464 1354 aa28.33■■■□□ 2.13
NPM3-201ENST00000370110 BCANQ96GW7 911 aa28.31■■■□□ 2.12
NPM3-201ENST00000370110 RIMS2Q9UQ26 1411 aa28.31■■■□□ 2.12
NPM3-201ENST00000370110 PLEKHG1Q9ULL1 1385 aa28.3■■■□□ 2.12
NPM3-201ENST00000370110 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
NPM3-201ENST00000370110 E9PCH4 1651 aa28.28■■■□□ 2.12
NPM3-201ENST00000370110 MSH6P52701 1360 aa28.25■■■□□ 2.11
NPM3-201ENST00000370110 PPP1R15AO75807 674 aaPredicted RBP28.23■■■□□ 2.11
NPM3-201ENST00000370110 IQGAP3Q86VI3 1631 aa28.21■■■□□ 2.11
NPM3-201ENST00000370110 ADAMTS13Q76LX8 1427 aa28.21■■■□□ 2.11
NPM3-201ENST00000370110 POTEAQ6S8J7 498 aa28.21■■■□□ 2.11
NPM3-201ENST00000370110 CHGAP10645 457 aaKnown RBP28.2■■■□□ 2.1
NPM3-201ENST00000370110 NUTM2DQ5VT03 806 aaPredicted RBP28.2■■■□□ 2.1
NPM3-201ENST00000370110 SLAIN2Q9P270 581 aa28.2■■■□□ 2.1
NPM3-201ENST00000370110 PHLPP1O60346 1717 aa28.2■■■□□ 2.1
NPM3-201ENST00000370110 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
NPM3-201ENST00000370110 HDGFP51858 240 aaKnown RBP28.15■■■□□ 2.1
NPM3-201ENST00000370110 NAIPQ13075 1403 aa28.14■■■□□ 2.1
NPM3-201ENST00000370110 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.09
NPM3-201ENST00000370110 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.13■■■□□ 2.09
NPM3-201ENST00000370110 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
NPM3-201ENST00000370110 HFM1A2PYH4 1435 aa28.12■■■□□ 2.09
NPM3-201ENST00000370110 NUP155O75694 1391 aa28.11■■■□□ 2.09
NPM3-201ENST00000370110 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.1■■■□□ 2.09
NPM3-201ENST00000370110 TRIM52Q96A61 297 aa28.1■■■□□ 2.09
NPM3-201ENST00000370110 JCADQ9P266 1359 aa28.1■■■□□ 2.09
NPM3-201ENST00000370110 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
NPM3-201ENST00000370110 PTPRUQ92729 1446 aa28.08■■■□□ 2.09
NPM3-201ENST00000370110 C14orf37Q86TY3 774 aa28.06■■■□□ 2.08
NPM3-201ENST00000370110 PIK3R4Q99570 1358 aa28.06■■■□□ 2.08
NPM3-201ENST00000370110 LRP6O75581 1613 aa28.05■■■□□ 2.08
NPM3-201ENST00000370110 TRPM2O94759 1503 aa28.05■■■□□ 2.08
NPM3-201ENST00000370110 TRIM26Q12899 539 aaPredicted RBP28.05■■■□□ 2.08
NPM3-201ENST00000370110 NRXN3Q9Y4C0 1643 aa28.05■■■□□ 2.08
NPM3-201ENST00000370110 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
NPM3-201ENST00000370110 SETD5Q9C0A6 1442 aa28.02■■■□□ 2.08
NPM3-201ENST00000370110 AHDC1Q5TGY3 1603 aaPredicted RBP28.02■■■□□ 2.08
NPM3-201ENST00000370110 SPHKAPQ2M3C7 1700 aa28.01■■■□□ 2.07
NPM3-201ENST00000370110 C19orf44Q9H6X5 657 aa28.01■■■□□ 2.07
NPM3-201ENST00000370110 AMOTL2Q9Y2J4 779 aa28.01■■■□□ 2.07
NPM3-201ENST00000370110 CADPS2Q86UW7 1296 aa28■■■□□ 2.07
NPM3-201ENST00000370110 XRN1Q8IZH2 1706 aaKnown RBP28■■■□□ 2.07
NPM3-201ENST00000370110 SETBP1Q9Y6X0 1596 aa27.98■■■□□ 2.07
NPM3-201ENST00000370110 ATF3P18847 181 aa27.97■■■□□ 2.07
NPM3-201ENST00000370110 SHPRHQ149N8 1683 aa27.95■■■□□ 2.07
NPM3-201ENST00000370110 BRINP3Q76B58 766 aa27.94■■■□□ 2.06
NPM3-201ENST00000370110 SPATA31A6Q5VVP1 1343 aa27.93■■■□□ 2.06
NPM3-201ENST00000370110 RAB3GAP2Q9H2M9 1393 aa27.93■■■□□ 2.06
NPM3-201ENST00000370110 METP08581 1390 aa27.92■■■□□ 2.06
NPM3-201ENST00000370110 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
NPM3-201ENST00000370110 DCCP43146 1447 aa27.9■■■□□ 2.06
NPM3-201ENST00000370110 ASXL1Q8IXJ9 1541 aa27.89■■■□□ 2.06
NPM3-201ENST00000370110 SLC4A1APQ9BWU0 796 aaKnown RBP27.89■■■□□ 2.06
NPM3-201ENST00000370110 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
NPM3-201ENST00000370110 MST1RQ04912 1400 aa27.88■■■□□ 2.05
NPM3-201ENST00000370110 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
NPM3-201ENST00000370110 ACIN1Q9UKV3 1341 aaKnown RBP27.88■■■□□ 2.05
NPM3-201ENST00000370110 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
NPM3-201ENST00000370110 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
NPM3-201ENST00000370110 NALCNQ8IZF0 1738 aa27.83■■■□□ 2.05
NPM3-201ENST00000370110 ADGRL3Q9HAR2 1447 aa27.81■■■□□ 2.04
NPM3-201ENST00000370110 ZNF772Q68DY9 489 aaPredicted RBP27.8■■■□□ 2.04
NPM3-201ENST00000370110 NUTM2BA6NNL0 878 aaPredicted RBP27.79■■■□□ 2.04
NPM3-201ENST00000370110 NUTM2EB1AL46 878 aaPredicted RBP27.79■■■□□ 2.04
NPM3-201ENST00000370110 NUTM2AQ8IVF1 878 aaPredicted RBP27.79■■■□□ 2.04
NPM3-201ENST00000370110 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
NPM3-201ENST00000370110 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
NPM3-201ENST00000370110 KIF1BO60333 1816 aa27.78■■■□□ 2.04
NPM3-201ENST00000370110 HRCP23327 699 aa27.76■■■□□ 2.03
NPM3-201ENST00000370110 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
NPM3-201ENST00000370110 FOXD1Q16676 465 aa27.73■■■□□ 2.03
NPM3-201ENST00000370110 AFF2P51816 1311 aa27.71■■■□□ 2.03
NPM3-201ENST00000370110 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
NPM3-201ENST00000370110 PNPLA6Q8IY17 1366 aa27.71■■■□□ 2.03
NPM3-201ENST00000370110 ROBO2Q9HCK4 1378 aa27.69■■■□□ 2.02
NPM3-201ENST00000370110 C1orf167Q5SNV9 1468 aa27.69■■■□□ 2.02
NPM3-201ENST00000370110 PTCH1Q13635 1447 aa27.68■■■□□ 2.02
NPM3-201ENST00000370110 RXRBP28702 533 aa27.68■■■□□ 2.02
NPM3-201ENST00000370110 LRRC59Q96AG4 307 aaKnown RBP27.68■■■□□ 2.02
NPM3-201ENST00000370110 CDK12Q9NYV4 1490 aaPredicted RBP27.64■■■□□ 2.02
NPM3-201ENST00000370110 LAMC1P11047 1609 aa27.64■■■□□ 2.02
NPM3-201ENST00000370110 C8orf37Q96NL8 207 aa27.63■■■□□ 2.01
NPM3-201ENST00000370110 PRAG1Q86YV5 1406 aa27.63■■■□□ 2.01
NPM3-201ENST00000370110 PPLO60437 1756 aa27.63■■■□□ 2.01
NPM3-201ENST00000370110 VGFO15240 615 aaPredicted RBP27.61■■■□□ 2.01
NPM3-201ENST00000370110 ORAI2Q96SN7 254 aa27.61■■■□□ 2.01
NPM3-201ENST00000370110 RGS12O14924 1447 aa27.59■■■□□ 2.01
NPM3-201ENST00000370110 SOS2Q07890 1332 aaPredicted RBP27.57■■■□□ 2
NPM3-201ENST00000370110 ADAMTS2O95450 1211 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms