RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 CPLX1O14810 134 aa13.52□□□□□ -0.25
COL11A1-203ENST00000370096 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.25
COL11A1-203ENST00000370096 HOOK1Q9UJC3 728 aaKnown RBP13.51□□□□□ -0.25
COL11A1-203ENST00000370096 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
COL11A1-203ENST00000370096 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
COL11A1-203ENST00000370096 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-203ENST00000370096 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
COL11A1-203ENST00000370096 TNIKQ9UKE5 1360 aa13.49□□□□□ -0.25
COL11A1-203ENST00000370096 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
COL11A1-203ENST00000370096 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
COL11A1-203ENST00000370096 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
COL11A1-203ENST00000370096 MSH5O43196 834 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 EPS15P42566 896 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
COL11A1-203ENST00000370096 EEA1Q15075 1411 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 PKNOX2Q96KN3 472 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 CPLX2Q6PUV4 134 aaKnown RBP13.48□□□□□ -0.25
COL11A1-203ENST00000370096 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
COL11A1-203ENST00000370096 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
COL11A1-203ENST00000370096 CCDC43Q96MW1 224 aaKnown RBP13.47□□□□□ -0.25
COL11A1-203ENST00000370096 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-203ENST00000370096 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
COL11A1-203ENST00000370096 TERF2IPQ9NYB0 399 aa13.47□□□□□ -0.25
COL11A1-203ENST00000370096 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
COL11A1-203ENST00000370096 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
COL11A1-203ENST00000370096 FYB1O15117 783 aa13.46□□□□□ -0.25
COL11A1-203ENST00000370096 ZKSCAN2Q63HK3 967 aa13.46□□□□□ -0.25
COL11A1-203ENST00000370096 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.25
COL11A1-203ENST00000370096 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
COL11A1-203ENST00000370096 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
COL11A1-203ENST00000370096 RUFY2Q8WXA3 655 aa13.46□□□□□ -0.25
COL11A1-203ENST00000370096 C9orf78Q9NZ63 289 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-203ENST00000370096 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
COL11A1-203ENST00000370096 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.26
COL11A1-203ENST00000370096 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.26
COL11A1-203ENST00000370096 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
COL11A1-203ENST00000370096 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
COL11A1-203ENST00000370096 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
COL11A1-203ENST00000370096 REC8O95072 547 aa13.45□□□□□ -0.26
COL11A1-203ENST00000370096 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 AXDND1Q5T1B0 1012 aaPredicted RBP13.44□□□□□ -0.26
COL11A1-203ENST00000370096 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 ERICH2A1L162 156 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 TRDNQ13061 729 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
COL11A1-203ENST00000370096 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
COL11A1-203ENST00000370096 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
COL11A1-203ENST00000370096 SMC2O95347 1197 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 C1orf141Q5JVX7 400 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 OFD1O75665 1012 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 NUP155O75694 1391 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 NFKBIBQ15653 356 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
COL11A1-203ENST00000370096 LEKR1Q6ZMV7 388 aa13.42□□□□□ -0.26
COL11A1-203ENST00000370096 PANK3Q9H999 370 aa13.42□□□□□ -0.26
COL11A1-203ENST00000370096 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
COL11A1-203ENST00000370096 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
COL11A1-203ENST00000370096 MPNDQ8N594 471 aa13.42□□□□□ -0.26
COL11A1-203ENST00000370096 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
COL11A1-203ENST00000370096 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
COL11A1-203ENST00000370096 NEFHP12036 1026 aa13.41□□□□□ -0.26
COL11A1-203ENST00000370096 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
COL11A1-203ENST00000370096 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
COL11A1-203ENST00000370096 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
COL11A1-203ENST00000370096 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
COL11A1-203ENST00000370096 AEBP2Q6ZN18 517 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-203ENST00000370096 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
COL11A1-203ENST00000370096 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
COL11A1-203ENST00000370096 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
COL11A1-203ENST00000370096 ERCC4Q92889 916 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-203ENST00000370096 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
COL11A1-203ENST00000370096 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-203ENST00000370096 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
COL11A1-203ENST00000370096 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
COL11A1-203ENST00000370096 NUCB2P80303 420 aa13.39□□□□□ -0.27
COL11A1-203ENST00000370096 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL11A1-203ENST00000370096 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
COL11A1-203ENST00000370096 E9PSI1 815 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 EVA1CP58658 441 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
COL11A1-203ENST00000370096 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 L3MBTL2Q969R5 705 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 SDF4Q9BRK5 362 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-203ENST00000370096 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
COL11A1-203ENST00000370096 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
COL11A1-203ENST00000370096 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-203ENST00000370096 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
COL11A1-203ENST00000370096 FAM193AP78312 1265 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms