RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
PRPF38B-203ENST00000370025 UGGT1Q9NYU2 1555 aa13.61□□□□□ -0.23
PRPF38B-203ENST00000370025 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
PRPF38B-203ENST00000370025 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
PRPF38B-203ENST00000370025 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
PRPF38B-203ENST00000370025 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
PRPF38B-203ENST00000370025 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
PRPF38B-203ENST00000370025 PRKRIP1Q9H875 184 aaPredicted RBP13.58□□□□□ -0.24
PRPF38B-203ENST00000370025 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
PRPF38B-203ENST00000370025 MYOM2P54296 1465 aa13.56□□□□□ -0.24
PRPF38B-203ENST00000370025 NOS1P29475 1434 aa13.56□□□□□ -0.24
PRPF38B-203ENST00000370025 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
PRPF38B-203ENST00000370025 TMF1P82094 1093 aa13.55□□□□□ -0.24
PRPF38B-203ENST00000370025 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
PRPF38B-203ENST00000370025 REREQ9P2R6 1566 aa13.55□□□□□ -0.24
PRPF38B-203ENST00000370025 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
PRPF38B-203ENST00000370025 PPP6R1Q9UPN7 881 aa13.54□□□□□ -0.24
PRPF38B-203ENST00000370025 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
PRPF38B-203ENST00000370025 TESK2Q96S53 571 aa13.53□□□□□ -0.24
PRPF38B-203ENST00000370025 IFT172Q9UG01 1749 aa13.53□□□□□ -0.24
PRPF38B-203ENST00000370025 AGLP35573 1532 aa13.53□□□□□ -0.24
PRPF38B-203ENST00000370025 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
PRPF38B-203ENST00000370025 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
PRPF38B-203ENST00000370025 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.24
PRPF38B-203ENST00000370025 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 COL17A1Q9UMD9 1497 aaPredicted RBP13.52□□□□□ -0.25
PRPF38B-203ENST00000370025 SYNMO15061 1565 aa13.5□□□□□ -0.25
PRPF38B-203ENST00000370025 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
PRPF38B-203ENST00000370025 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF38B-203ENST00000370025 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
PRPF38B-203ENST00000370025 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
PRPF38B-203ENST00000370025 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
PRPF38B-203ENST00000370025 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
PRPF38B-203ENST00000370025 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
PRPF38B-203ENST00000370025 PPLO60437 1756 aa13.49□□□□□ -0.25
PRPF38B-203ENST00000370025 IDI1Q13907 227 aa13.49□□□□□ -0.25
PRPF38B-203ENST00000370025 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
PRPF38B-203ENST00000370025 MLECQ14165 292 aa13.46□□□□□ -0.25
PRPF38B-203ENST00000370025 CCDC184Q52MB2 194 aa13.46□□□□□ -0.25
PRPF38B-203ENST00000370025 KTN1Q86UP2 1357 aaKnown RBP13.46□□□□□ -0.25
PRPF38B-203ENST00000370025 ESF1Q9H501 851 aaKnown RBP13.46□□□□□ -0.26
PRPF38B-203ENST00000370025 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.26
PRPF38B-203ENST00000370025 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
PRPF38B-203ENST00000370025 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
PRPF38B-203ENST00000370025 RALBP1Q15311 655 aa13.45□□□□□ -0.26
PRPF38B-203ENST00000370025 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
PRPF38B-203ENST00000370025 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
PRPF38B-203ENST00000370025 PANK3Q9H999 370 aa13.43□□□□□ -0.26
PRPF38B-203ENST00000370025 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
PRPF38B-203ENST00000370025 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
PRPF38B-203ENST00000370025 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
PRPF38B-203ENST00000370025 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
PRPF38B-203ENST00000370025 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
PRPF38B-203ENST00000370025 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
PRPF38B-203ENST00000370025 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
PRPF38B-203ENST00000370025 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
PRPF38B-203ENST00000370025 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
PRPF38B-203ENST00000370025 CENPJQ9HC77 1338 aaPredicted RBP13.4□□□□□ -0.26
PRPF38B-203ENST00000370025 MYO5BQ9ULV0 1848 aa13.39□□□□□ -0.27
PRPF38B-203ENST00000370025 TMEM132EQ6IEE7 984 aa13.39□□□□□ -0.27
PRPF38B-203ENST00000370025 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
PRPF38B-203ENST00000370025 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
PRPF38B-203ENST00000370025 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
PRPF38B-203ENST00000370025 ZMYM3Q14202 1370 aa13.37□□□□□ -0.27
PRPF38B-203ENST00000370025 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
PRPF38B-203ENST00000370025 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
PRPF38B-203ENST00000370025 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
PRPF38B-203ENST00000370025 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
PRPF38B-203ENST00000370025 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
PRPF38B-203ENST00000370025 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
PRPF38B-203ENST00000370025 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
PRPF38B-203ENST00000370025 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
PRPF38B-203ENST00000370025 ZBED9Q6R2W3 1325 aa13.31□□□□□ -0.28
PRPF38B-203ENST00000370025 MYOM1P52179 1685 aa13.31□□□□□ -0.28
PRPF38B-203ENST00000370025 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
PRPF38B-203ENST00000370025 RIMS2Q9UQ26 1411 aa13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 STK26Q9P289 416 aa13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 TNRQ92752 1358 aa13.3□□□□□ -0.28
PRPF38B-203ENST00000370025 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms