RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 TOP2BQ02880 1626 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 IBSPP21815 317 aaPredicted RBP10.45□□□□□ -0.74
LCA5-201ENST00000369846 NUCB2P80303 420 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 RALBP1Q15311 655 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 MORC1Q86VD1 984 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
LCA5-201ENST00000369846 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
LCA5-201ENST00000369846 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
LCA5-201ENST00000369846 TPM1P09493 284 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 AXDND1Q5T1B0 1012 aaPredicted RBP10.43□□□□□ -0.74
LCA5-201ENST00000369846 RASSF8Q8NHQ8 419 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 CCDC112Q8NEF3 446 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
LCA5-201ENST00000369846 H3BQV1 296 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 FOXD1Q16676 465 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 IFFO2Q5TF58 517 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
LCA5-201ENST00000369846 IPO7O95373 1038 aaKnown RBP10.42□□□□□ -0.74
LCA5-201ENST00000369846 USP8P40818 1118 aa10.42□□□□□ -0.74
LCA5-201ENST00000369846 NLRP13Q86W25 1043 aa10.42□□□□□ -0.74
LCA5-201ENST00000369846 TRIM5Q9C035 493 aa10.42□□□□□ -0.74
LCA5-201ENST00000369846 CDR1P51861 262 aa10.42□□□□□ -0.74
LCA5-201ENST00000369846 ERICH3Q5RHP9 1530 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 HMMRO75330 724 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 SASS6Q6UVJ0 657 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 IRX3P78415 501 aaPredicted RBP10.41□□□□□ -0.74
LCA5-201ENST00000369846 GIMAP7Q8NHV1 300 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 CENPHQ9H3R5 247 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 PRKRIP1Q9H875 184 aaPredicted RBP10.41□□□□□ -0.74
LCA5-201ENST00000369846 CALCOCO1Q9P1Z2 691 aa10.41□□□□□ -0.74
LCA5-201ENST00000369846 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
LCA5-201ENST00000369846 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
LCA5-201ENST00000369846 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
LCA5-201ENST00000369846 MEX3CQ5U5Q3 659 aaKnown RBP10.4□□□□□ -0.74
LCA5-201ENST00000369846 LRRC9Q6ZRR7 1453 aa10.4□□□□□ -0.74
LCA5-201ENST00000369846 CUX1P39880 1505 aa10.4□□□□□ -0.74
LCA5-201ENST00000369846 VPS37CA5D8V6 355 aaPredicted RBP10.4□□□□□ -0.74
LCA5-201ENST00000369846 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
LCA5-201ENST00000369846 DYDC1Q8WWB3 177 aa10.4□□□□□ -0.74
LCA5-201ENST00000369846 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
LCA5-201ENST00000369846 FAM184AQ8NB25 1140 aa10.4□□□□□ -0.75
LCA5-201ENST00000369846 RILPL2Q969X0 211 aa10.4□□□□□ -0.75
LCA5-201ENST00000369846 BICRAQ9NZM4 1560 aa10.4□□□□□ -0.75
LCA5-201ENST00000369846 KIAA0754O94854 1291 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 ISY1Q9ULR0 285 aaKnown RBP10.39□□□□□ -0.75
LCA5-201ENST00000369846 XPCQ01831 940 aaPredicted RBP10.39□□□□□ -0.75
LCA5-201ENST00000369846 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 BACH2Q9BYV9 841 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
LCA5-201ENST00000369846 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
LCA5-201ENST00000369846 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
LCA5-201ENST00000369846 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
LCA5-201ENST00000369846 TTLL5Q6EMB2 1281 aa10.38□□□□□ -0.75
LCA5-201ENST00000369846 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
LCA5-201ENST00000369846 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.75
LCA5-201ENST00000369846 MCM4P33991 863 aa10.37□□□□□ -0.75
LCA5-201ENST00000369846 AKNAQ7Z591 1439 aa10.37□□□□□ -0.75
LCA5-201ENST00000369846 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
LCA5-201ENST00000369846 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
LCA5-201ENST00000369846 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
LCA5-201ENST00000369846 GTF2F1P35269 517 aaKnown RBP eCLIP10.36□□□□□ -0.75
LCA5-201ENST00000369846 RRP7AQ9Y3A4 280 aaKnown RBP10.36□□□□□ -0.75
LCA5-201ENST00000369846 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
LCA5-201ENST00000369846 SOX12O15370 315 aa10.36□□□□□ -0.75
LCA5-201ENST00000369846 MBD3O95983 291 aa10.36□□□□□ -0.75
LCA5-201ENST00000369846 PRM3Q9NNZ6 103 aa10.36□□□□□ -0.75
LCA5-201ENST00000369846 REC8O95072 547 aa10.35□□□□□ -0.75
LCA5-201ENST00000369846 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
LCA5-201ENST00000369846 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
LCA5-201ENST00000369846 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
LCA5-201ENST00000369846 PDILTQ8N807 584 aa10.35□□□□□ -0.75
LCA5-201ENST00000369846 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
LCA5-201ENST00000369846 IGF1RP08069 1367 aa10.35□□□□□ -0.75
LCA5-201ENST00000369846 VGLL3A8MV65 326 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 TIGD1Q96MW7 591 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 IGSF3O75054 1194 aa10.34□□□□□ -0.75
LCA5-201ENST00000369846 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
LCA5-201ENST00000369846 POLR3GO15318 223 aaPredicted RBP10.33□□□□□ -0.76
LCA5-201ENST00000369846 SMC3Q9UQE7 1217 aa10.33□□□□□ -0.76
LCA5-201ENST00000369846 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
LCA5-201ENST00000369846 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
LCA5-201ENST00000369846 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
LCA5-201ENST00000369846 ANO2Q9NQ90 1003 aa10.33□□□□□ -0.76
LCA5-201ENST00000369846 CAGE1Q8TC20 777 aa10.33□□□□□ -0.76
LCA5-201ENST00000369846 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
LCA5-201ENST00000369846 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 CCDC18Q5T9S5 1454 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms