RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 NEXMIFQ5QGS0 1516 aa24.42■■□□□ 1.5
UBE3D-203ENST00000369747 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
UBE3D-203ENST00000369747 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
UBE3D-203ENST00000369747 RPGRIP1LQ68CZ1 1315 aa24.41■■□□□ 1.5
UBE3D-203ENST00000369747 PRAG1Q86YV5 1406 aa24.41■■□□□ 1.5
UBE3D-203ENST00000369747 ADGRF5Q8IZF2 1346 aa24.4■■□□□ 1.5
UBE3D-203ENST00000369747 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
UBE3D-203ENST00000369747 HIRIP3Q9BW71 556 aaPredicted RBP24.39■■□□□ 1.5
UBE3D-203ENST00000369747 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.49
UBE3D-203ENST00000369747 MYOM2P54296 1465 aa24.38■■□□□ 1.49
UBE3D-203ENST00000369747 STAC3Q96MF2 364 aa24.37■■□□□ 1.49
UBE3D-203ENST00000369747 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
UBE3D-203ENST00000369747 RIMS2Q9UQ26 1411 aa24.35■■□□□ 1.49
UBE3D-203ENST00000369747 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
UBE3D-203ENST00000369747 TMEM2Q9UHN6 1383 aa24.35■■□□□ 1.49
UBE3D-203ENST00000369747 ZFYVE9O95405 1425 aa24.34■■□□□ 1.49
UBE3D-203ENST00000369747 VGFO15240 615 aaPredicted RBP24.34■■□□□ 1.49
UBE3D-203ENST00000369747 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
UBE3D-203ENST00000369747 ZNF142P52746 1687 aaPredicted RBP24.33■■□□□ 1.49
UBE3D-203ENST00000369747 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
UBE3D-203ENST00000369747 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.48
UBE3D-203ENST00000369747 THEMISQ8N1K5 641 aaPredicted RBP24.32■■□□□ 1.48
UBE3D-203ENST00000369747 TRPM1Q7Z4N2 1603 aa24.31■■□□□ 1.48
UBE3D-203ENST00000369747 PIK3C2GO75747 1445 aa24.3■■□□□ 1.48
UBE3D-203ENST00000369747 NBPF1Q3BBV0 1214 aa24.3■■□□□ 1.48
UBE3D-203ENST00000369747 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
UBE3D-203ENST00000369747 LTKP29376 864 aa24.28■■□□□ 1.48
UBE3D-203ENST00000369747 CFAP70Q5T0N1 1121 aa24.28■■□□□ 1.48
UBE3D-203ENST00000369747 SLIT1O75093 1534 aa24.28■■□□□ 1.48
UBE3D-203ENST00000369747 ARHGAP23Q9P227 1491 aa24.27■■□□□ 1.48
UBE3D-203ENST00000369747 ROCK2O75116 1388 aaKnown RBP24.26■■□□□ 1.47
UBE3D-203ENST00000369747 TXNDC2Q86VQ3 553 aa24.25■■□□□ 1.47
UBE3D-203ENST00000369747 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
UBE3D-203ENST00000369747 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
UBE3D-203ENST00000369747 HSPA5P11021 654 aaKnown RBP24.23■■□□□ 1.47
UBE3D-203ENST00000369747 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
UBE3D-203ENST00000369747 C14orf93Q9H972 538 aaKnown RBP24.23■■□□□ 1.47
UBE3D-203ENST00000369747 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
UBE3D-203ENST00000369747 KIAA1210Q9ULL0 1709 aa24.21■■□□□ 1.47
UBE3D-203ENST00000369747 GPRASP1Q5JY77 1395 aa24.2■■□□□ 1.46
UBE3D-203ENST00000369747 EIF4G2P78344 907 aaKnown RBP eCLIP24.19■■□□□ 1.46
UBE3D-203ENST00000369747 SCAF11Q99590 1463 aaKnown RBP24.18■■□□□ 1.46
UBE3D-203ENST00000369747 TMEM132EQ6IEE7 984 aa24.18■■□□□ 1.46
UBE3D-203ENST00000369747 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
UBE3D-203ENST00000369747 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
UBE3D-203ENST00000369747 BCANQ96GW7 911 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 LMTK3Q96Q04 1460 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 IQGAP1P46940 1657 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 HSPA2P54652 639 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
UBE3D-203ENST00000369747 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
UBE3D-203ENST00000369747 LAMC1P11047 1609 aa24.14■■□□□ 1.46
UBE3D-203ENST00000369747 ADGRB1O14514 1584 aa24.14■■□□□ 1.46
UBE3D-203ENST00000369747 USP47Q96K76 1375 aa24.14■■□□□ 1.46
UBE3D-203ENST00000369747 ASXL1Q8IXJ9 1541 aa24.12■■□□□ 1.45
UBE3D-203ENST00000369747 SETD1AO15047 1707 aaKnown RBP24.12■■□□□ 1.45
UBE3D-203ENST00000369747 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
UBE3D-203ENST00000369747 WASHC2AQ641Q2 1341 aa24.11■■□□□ 1.45
UBE3D-203ENST00000369747 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
UBE3D-203ENST00000369747 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
UBE3D-203ENST00000369747 POLR1AO95602 1720 aaPredicted RBP24.1■■□□□ 1.45
UBE3D-203ENST00000369747 METP08581 1390 aa24.08■■□□□ 1.45
UBE3D-203ENST00000369747 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
UBE3D-203ENST00000369747 MED14O60244 1454 aa24.06■■□□□ 1.44
UBE3D-203ENST00000369747 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
UBE3D-203ENST00000369747 STK26Q9P289 416 aa24.06■■□□□ 1.44
UBE3D-203ENST00000369747 TRAK1Q9UPV9 953 aa24.06■■□□□ 1.44
UBE3D-203ENST00000369747 ANP32CO43423 234 aa24.04■■□□□ 1.44
UBE3D-203ENST00000369747 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
UBE3D-203ENST00000369747 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
UBE3D-203ENST00000369747 C11orf95C9JLR9 678 aaPredicted RBP24.02■■□□□ 1.44
UBE3D-203ENST00000369747 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
UBE3D-203ENST00000369747 CCDC7Q96M83 1385 aa24.01■■□□□ 1.43
UBE3D-203ENST00000369747 CCER2I3L3R5 266 aa24■■□□□ 1.43
UBE3D-203ENST00000369747 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
UBE3D-203ENST00000369747 LRPPRCP42704 1394 aaKnown RBP23.97■■□□□ 1.43
UBE3D-203ENST00000369747 EIF3AQ14152 1382 aaKnown RBP23.97■■□□□ 1.43
UBE3D-203ENST00000369747 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
UBE3D-203ENST00000369747 ARHGEF28Q8N1W1 1705 aaKnown RBP23.97■■□□□ 1.43
UBE3D-203ENST00000369747 TESK2Q96S53 571 aa23.96■■□□□ 1.43
UBE3D-203ENST00000369747 PTPRUQ92729 1446 aa23.96■■□□□ 1.43
UBE3D-203ENST00000369747 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
UBE3D-203ENST00000369747 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
UBE3D-203ENST00000369747 SAFB2Q14151 953 aaKnown RBP eCLIP23.92■■□□□ 1.42
UBE3D-203ENST00000369747 PRAM1Q96QH2 718 aa23.92■■□□□ 1.42
UBE3D-203ENST00000369747 KIF7Q2M1P5 1343 aa23.92■■□□□ 1.42
UBE3D-203ENST00000369747 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
UBE3D-203ENST00000369747 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
UBE3D-203ENST00000369747 TECPR2O15040 1411 aa23.9■■□□□ 1.42
UBE3D-203ENST00000369747 PIK3R4Q99570 1358 aa23.89■■□□□ 1.42
UBE3D-203ENST00000369747 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.42
UBE3D-203ENST00000369747 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.42
UBE3D-203ENST00000369747 QRICH2Q9H0J4 1663 aa23.89■■□□□ 1.41
UBE3D-203ENST00000369747 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.41
UBE3D-203ENST00000369747 DLC1Q96QB1 1528 aa23.88■■□□□ 1.41
UBE3D-203ENST00000369747 POGKQ9P215 609 aa23.88■■□□□ 1.41
UBE3D-203ENST00000369747 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
UBE3D-203ENST00000369747 KCNA6P17658 529 aa23.87■■□□□ 1.41
UBE3D-203ENST00000369747 CPS1P31327 1500 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms