RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
SFR1-201ENST00000369727 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
SFR1-201ENST00000369727 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
SFR1-201ENST00000369727 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
SFR1-201ENST00000369727 C6orf132Q5T0Z8 1188 aa12.61□□□□□ -0.39
SFR1-201ENST00000369727 NBR1Q14596 966 aa12.6□□□□□ -0.39
SFR1-201ENST00000369727 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
SFR1-201ENST00000369727 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
SFR1-201ENST00000369727 HCSTQ9UBK5 93 aa12.59□□□□□ -0.39
SFR1-201ENST00000369727 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
SFR1-201ENST00000369727 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
SFR1-201ENST00000369727 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
SFR1-201ENST00000369727 TNIKQ9UKE5 1360 aa12.55□□□□□ -0.4
SFR1-201ENST00000369727 PTPRGP23470 1445 aa12.55□□□□□ -0.4
SFR1-201ENST00000369727 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
SFR1-201ENST00000369727 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
SFR1-201ENST00000369727 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
SFR1-201ENST00000369727 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
SFR1-201ENST00000369727 CTTNBP2Q8WZ74 1663 aa12.54□□□□□ -0.4
SFR1-201ENST00000369727 MAP3K7O43318 606 aa12.54□□□□□ -0.4
SFR1-201ENST00000369727 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
SFR1-201ENST00000369727 DISP1Q96F81 1524 aa12.53□□□□□ -0.4
SFR1-201ENST00000369727 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
SFR1-201ENST00000369727 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
SFR1-201ENST00000369727 EEA1Q15075 1411 aa12.52□□□□□ -0.41
SFR1-201ENST00000369727 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
SFR1-201ENST00000369727 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
SFR1-201ENST00000369727 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
SFR1-201ENST00000369727 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
SFR1-201ENST00000369727 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
SFR1-201ENST00000369727 KIAA0556O60303 1618 aa12.5□□□□□ -0.41
SFR1-201ENST00000369727 PTPN5P54829 565 aa12.49□□□□□ -0.41
SFR1-201ENST00000369727 WNT2BQ93097 391 aa12.49□□□□□ -0.41
SFR1-201ENST00000369727 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
SFR1-201ENST00000369727 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
SFR1-201ENST00000369727 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
SFR1-201ENST00000369727 ABCC10Q5T3U5 1492 aa12.48□□□□□ -0.41
SFR1-201ENST00000369727 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
SFR1-201ENST00000369727 THSD4Q6ZMP0 1018 aa12.47□□□□□ -0.41
SFR1-201ENST00000369727 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
SFR1-201ENST00000369727 UACAQ9BZF9 1416 aa12.46□□□□□ -0.41
SFR1-201ENST00000369727 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
SFR1-201ENST00000369727 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.42
SFR1-201ENST00000369727 OSBPP22059 807 aa12.45□□□□□ -0.42
SFR1-201ENST00000369727 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
SFR1-201ENST00000369727 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
SFR1-201ENST00000369727 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
SFR1-201ENST00000369727 PLA2G2EQ9NZK7 142 aa12.44□□□□□ -0.42
SFR1-201ENST00000369727 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
SFR1-201ENST00000369727 LAPTM4BQ86VI4 370 aa12.42□□□□□ -0.42
SFR1-201ENST00000369727 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
SFR1-201ENST00000369727 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
SFR1-201ENST00000369727 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
SFR1-201ENST00000369727 PLB1Q6P1J6 1458 aa12.41□□□□□ -0.42
SFR1-201ENST00000369727 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
SFR1-201ENST00000369727 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
SFR1-201ENST00000369727 KIF21BO75037 1637 aa12.38□□□□□ -0.43
SFR1-201ENST00000369727 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
SFR1-201ENST00000369727 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
SFR1-201ENST00000369727 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
SFR1-201ENST00000369727 ZCCHC11Q5TAX3 1644 aaKnown RBP12.38□□□□□ -0.43
SFR1-201ENST00000369727 PRSS12P56730 875 aa12.37□□□□□ -0.43
SFR1-201ENST00000369727 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
SFR1-201ENST00000369727 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
SFR1-201ENST00000369727 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
SFR1-201ENST00000369727 ABCA8O94911 1581 aa12.37□□□□□ -0.43
SFR1-201ENST00000369727 BCAMP50895 628 aa12.37□□□□□ -0.43
SFR1-201ENST00000369727 GLI2P10070 1586 aa12.36□□□□□ -0.43
SFR1-201ENST00000369727 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SFR1-201ENST00000369727 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
SFR1-201ENST00000369727 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
SFR1-201ENST00000369727 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
SFR1-201ENST00000369727 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
SFR1-201ENST00000369727 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
SFR1-201ENST00000369727 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
SFR1-201ENST00000369727 SMAPO00193 183 aa12.32□□□□□ -0.44
SFR1-201ENST00000369727 EPRSP07814 1512 aaKnown RBP12.32□□□□□ -0.44
SFR1-201ENST00000369727 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
SFR1-201ENST00000369727 C3orf80F5H4A9 247 aa12.3□□□□□ -0.44
SFR1-201ENST00000369727 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
SFR1-201ENST00000369727 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
SFR1-201ENST00000369727 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
SFR1-201ENST00000369727 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
SFR1-201ENST00000369727 KDM6BO15054 1643 aa12.29□□□□□ -0.44
SFR1-201ENST00000369727 TATDN2Q93075 761 aa12.28□□□□□ -0.44
SFR1-201ENST00000369727 PNMA3Q9UL41 463 aa12.28□□□□□ -0.44
SFR1-201ENST00000369727 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
SFR1-201ENST00000369727 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
SFR1-201ENST00000369727 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
SFR1-201ENST00000369727 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
SFR1-201ENST00000369727 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
SFR1-201ENST00000369727 SEMA3EO15041 775 aa12.27□□□□□ -0.45
SFR1-201ENST00000369727 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
SFR1-201ENST00000369727 ATP10BO94823 1461 aa12.26□□□□□ -0.45
SFR1-201ENST00000369727 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
SFR1-201ENST00000369727 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
SFR1-201ENST00000369727 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
SFR1-201ENST00000369727 FHOD3Q2V2M9 1422 aa12.26□□□□□ -0.45
SFR1-201ENST00000369727 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
SFR1-201ENST00000369727 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms