RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 STAG3Q9UJ98 1225 aa26.87■■□□□ 1.89
FAM3A-204ENST00000369643 LTKP29376 864 aa26.86■■□□□ 1.89
FAM3A-204ENST00000369643 SENP3Q9H4L4 574 aaPredicted RBP26.86■■□□□ 1.89
FAM3A-204ENST00000369643 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
FAM3A-204ENST00000369643 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
FAM3A-204ENST00000369643 NRXN3Q9Y4C0 1643 aa26.82■■□□□ 1.88
FAM3A-204ENST00000369643 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
FAM3A-204ENST00000369643 IQGAP1P46940 1657 aa26.81■■□□□ 1.88
FAM3A-204ENST00000369643 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
FAM3A-204ENST00000369643 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
FAM3A-204ENST00000369643 L3MBTL2Q969R5 705 aa26.79■■□□□ 1.88
FAM3A-204ENST00000369643 SCAF11Q99590 1463 aaKnown RBP26.78■■□□□ 1.88
FAM3A-204ENST00000369643 ADGRF5Q8IZF2 1346 aa26.77■■□□□ 1.88
FAM3A-204ENST00000369643 SETD1AO15047 1707 aaKnown RBP26.75■■□□□ 1.87
FAM3A-204ENST00000369643 TXNDC2Q86VQ3 553 aa26.74■■□□□ 1.87
FAM3A-204ENST00000369643 MYOM2P54296 1465 aa26.73■■□□□ 1.87
FAM3A-204ENST00000369643 NRXN1Q9ULB1 1477 aa26.73■■□□□ 1.87
FAM3A-204ENST00000369643 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
FAM3A-204ENST00000369643 KDM2AQ9Y2K7 1162 aa26.72■■□□□ 1.87
FAM3A-204ENST00000369643 MED14O60244 1454 aa26.7■■□□□ 1.86
FAM3A-204ENST00000369643 RPGRIP1LQ68CZ1 1315 aa26.69■■□□□ 1.86
FAM3A-204ENST00000369643 TONSLQ96HA7 1378 aa26.69■■□□□ 1.86
FAM3A-204ENST00000369643 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
FAM3A-204ENST00000369643 SETBP1Q9Y6X0 1596 aa26.68■■□□□ 1.86
FAM3A-204ENST00000369643 NPHP4O75161 1426 aaPredicted RBP26.68■■□□□ 1.86
FAM3A-204ENST00000369643 PIK3C2GO75747 1445 aa26.68■■□□□ 1.86
FAM3A-204ENST00000369643 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
FAM3A-204ENST00000369643 PLEKHG1Q9ULL1 1385 aa26.67■■□□□ 1.86
FAM3A-204ENST00000369643 ASXL1Q8IXJ9 1541 aa26.67■■□□□ 1.86
FAM3A-204ENST00000369643 NBPF8Q3BBV2 869 aa26.65■■□□□ 1.86
FAM3A-204ENST00000369643 PRAG1Q86YV5 1406 aa26.65■■□□□ 1.86
FAM3A-204ENST00000369643 ALKQ9UM73 1620 aa26.64■■□□□ 1.86
FAM3A-204ENST00000369643 PPP1R15AO75807 674 aaPredicted RBP26.64■■□□□ 1.85
FAM3A-204ENST00000369643 EID1Q9Y6B2 187 aa26.63■■□□□ 1.85
FAM3A-204ENST00000369643 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.61■■□□□ 1.85
FAM3A-204ENST00000369643 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
FAM3A-204ENST00000369643 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
FAM3A-204ENST00000369643 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
FAM3A-204ENST00000369643 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
FAM3A-204ENST00000369643 CFAP70Q5T0N1 1121 aa26.57■■□□□ 1.84
FAM3A-204ENST00000369643 METP08581 1390 aa26.57■■□□□ 1.84
FAM3A-204ENST00000369643 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
FAM3A-204ENST00000369643 ADGRB1O14514 1584 aa26.55■■□□□ 1.84
FAM3A-204ENST00000369643 KIAA1210Q9ULL0 1709 aa26.54■■□□□ 1.84
FAM3A-204ENST00000369643 LAMC1P11047 1609 aa26.53■■□□□ 1.84
FAM3A-204ENST00000369643 DIP2AQ14689 1571 aa26.53■■□□□ 1.84
FAM3A-204ENST00000369643 CHD2O14647 1828 aaKnown RBP26.52■■□□□ 1.84
FAM3A-204ENST00000369643 NBPF1Q3BBV0 1214 aa26.52■■□□□ 1.84
FAM3A-204ENST00000369643 BCANQ96GW7 911 aa26.52■■□□□ 1.84
FAM3A-204ENST00000369643 HDGFP51858 240 aaKnown RBP26.51■■□□□ 1.83
FAM3A-204ENST00000369643 TMEM132EQ6IEE7 984 aa26.5■■□□□ 1.83
FAM3A-204ENST00000369643 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
FAM3A-204ENST00000369643 XRN1Q8IZH2 1706 aaKnown RBP26.49■■□□□ 1.83
FAM3A-204ENST00000369643 TIMELESSQ9UNS1 1208 aa26.47■■□□□ 1.83
FAM3A-204ENST00000369643 RALGAPBQ86X10 1494 aa26.47■■□□□ 1.83
FAM3A-204ENST00000369643 NWD1Q149M9 1564 aa26.46■■□□□ 1.83
FAM3A-204ENST00000369643 TBX22Q9Y458 520 aa26.45■■□□□ 1.83
FAM3A-204ENST00000369643 ZNF335Q9H4Z2 1342 aaPredicted RBP26.45■■□□□ 1.83
FAM3A-204ENST00000369643 STAC3Q96MF2 364 aa26.42■■□□□ 1.82
FAM3A-204ENST00000369643 KNDC1Q76NI1 1749 aa26.41■■□□□ 1.82
FAM3A-204ENST00000369643 ARHGEF28Q8N1W1 1705 aaKnown RBP26.41■■□□□ 1.82
FAM3A-204ENST00000369643 XIRP1Q702N8 1843 aaKnown RBP26.4■■□□□ 1.82
FAM3A-204ENST00000369643 YTHDC2Q9H6S0 1430 aaKnown RBP26.39■■□□□ 1.82
FAM3A-204ENST00000369643 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.82
FAM3A-204ENST00000369643 GPRASP1Q5JY77 1395 aa26.37■■□□□ 1.81
FAM3A-204ENST00000369643 KCNA6P17658 529 aa26.36■■□□□ 1.81
FAM3A-204ENST00000369643 STK26Q9P289 416 aa26.36■■□□□ 1.81
FAM3A-204ENST00000369643 ROCK2O75116 1388 aaKnown RBP26.36■■□□□ 1.81
FAM3A-204ENST00000369643 RBM33Q96EV2 1170 aaKnown RBP26.35■■□□□ 1.81
FAM3A-204ENST00000369643 CPS1P31327 1500 aa26.35■■□□□ 1.81
FAM3A-204ENST00000369643 LRPPRCP42704 1394 aaKnown RBP26.35■■□□□ 1.81
FAM3A-204ENST00000369643 ROBO2Q9HCK4 1378 aa26.35■■□□□ 1.81
FAM3A-204ENST00000369643 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
FAM3A-204ENST00000369643 PLEKHH1Q9ULM0 1364 aa26.34■■□□□ 1.81
FAM3A-204ENST00000369643 DMRT2Q9Y5R5 561 aa26.34■■□□□ 1.81
FAM3A-204ENST00000369643 PIK3R4Q99570 1358 aa26.33■■□□□ 1.81
FAM3A-204ENST00000369643 TECPR2O15040 1411 aa26.32■■□□□ 1.8
FAM3A-204ENST00000369643 TRAK1Q9UPV9 953 aa26.3■■□□□ 1.8
FAM3A-204ENST00000369643 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
FAM3A-204ENST00000369643 LRRC7Q96NW7 1537 aa26.28■■□□□ 1.8
FAM3A-204ENST00000369643 NALCNQ8IZF0 1738 aa26.28■■□□□ 1.8
FAM3A-204ENST00000369643 ABCC11Q96J66 1382 aa26.28■■□□□ 1.8
FAM3A-204ENST00000369643 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
FAM3A-204ENST00000369643 NKTRP30414 1462 aaKnown RBP26.27■■□□□ 1.8
FAM3A-204ENST00000369643 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
FAM3A-204ENST00000369643 PTCH1Q13635 1447 aa26.26■■□□□ 1.8
FAM3A-204ENST00000369643 CARD11Q9BXL7 1154 aa26.26■■□□□ 1.79
FAM3A-204ENST00000369643 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
FAM3A-204ENST00000369643 SAFB2Q14151 953 aaKnown RBP eCLIP26.22■■□□□ 1.79
FAM3A-204ENST00000369643 TMEM94Q12767 1356 aa26.2■■□□□ 1.79
FAM3A-204ENST00000369643 PRAM1Q96QH2 718 aa26.2■■□□□ 1.79
FAM3A-204ENST00000369643 USP47Q96K76 1375 aa26.19■■□□□ 1.78
FAM3A-204ENST00000369643 FAM135BQ49AJ0 1406 aa26.17■■□□□ 1.78
FAM3A-204ENST00000369643 HIRIP3Q9BW71 556 aaPredicted RBP26.17■■□□□ 1.78
FAM3A-204ENST00000369643 PROSER2Q86WR7 435 aaPredicted RBP26.16■■□□□ 1.78
FAM3A-204ENST00000369643 ZEB1P37275 1124 aaPredicted RBP26.14■■□□□ 1.77
FAM3A-204ENST00000369643 TULP4Q9NRJ4 1543 aa26.13■■□□□ 1.77
FAM3A-204ENST00000369643 HSPA5P11021 654 aaKnown RBP26.12■■□□□ 1.77
FAM3A-204ENST00000369643 ST20-MTHFSA0A0A6YYL1 179 aa26.11■■□□□ 1.77
FAM3A-204ENST00000369643 ADGRL3Q9HAR2 1447 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms