RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 GOLGA2Q08379 1002 aa20.69■□□□□ 0.9
SYNCRIP-202ENST00000369622 POGKQ9P215 609 aa20.69■□□□□ 0.9
SYNCRIP-202ENST00000369622 E9PCH4 1651 aa20.67■□□□□ 0.9
SYNCRIP-202ENST00000369622 PLEKHH1Q9ULM0 1364 aa20.67■□□□□ 0.9
SYNCRIP-202ENST00000369622 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
SYNCRIP-202ENST00000369622 DDRGK1Q96HY6 314 aa20.67■□□□□ 0.9
SYNCRIP-202ENST00000369622 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
SYNCRIP-202ENST00000369622 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
SYNCRIP-202ENST00000369622 APAF1O14727 1248 aa20.66■□□□□ 0.9
SYNCRIP-202ENST00000369622 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
SYNCRIP-202ENST00000369622 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
SYNCRIP-202ENST00000369622 TTC37Q6PGP7 1564 aa20.64■□□□□ 0.9
SYNCRIP-202ENST00000369622 CDCA8Q53HL2 280 aa20.64■□□□□ 0.89
SYNCRIP-202ENST00000369622 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
SYNCRIP-202ENST00000369622 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
SYNCRIP-202ENST00000369622 PREX2Q70Z35 1606 aa20.63■□□□□ 0.89
SYNCRIP-202ENST00000369622 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
SYNCRIP-202ENST00000369622 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
SYNCRIP-202ENST00000369622 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.63■□□□□ 0.89
SYNCRIP-202ENST00000369622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.893e-10■■■■□ 20.3
SYNCRIP-202ENST00000369622 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
SYNCRIP-202ENST00000369622 PRDM15P57071 1507 aaPredicted RBP20.61■□□□□ 0.89
SYNCRIP-202ENST00000369622 KIF3BO15066 747 aa20.61■□□□□ 0.89
SYNCRIP-202ENST00000369622 BCAR3O75815 825 aa20.6■□□□□ 0.89
SYNCRIP-202ENST00000369622 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
SYNCRIP-202ENST00000369622 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
SYNCRIP-202ENST00000369622 RRP9O43818 475 aaKnown RBP20.6■□□□□ 0.89
SYNCRIP-202ENST00000369622 TRAPPC8Q9Y2L5 1435 aa20.59■□□□□ 0.89
SYNCRIP-202ENST00000369622 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.89
SYNCRIP-202ENST00000369622 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.88
SYNCRIP-202ENST00000369622 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
SYNCRIP-202ENST00000369622 SLFN5Q08AF3 891 aa20.56■□□□□ 0.88
SYNCRIP-202ENST00000369622 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
SYNCRIP-202ENST00000369622 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
SYNCRIP-202ENST00000369622 DUOX2Q9NRD8 1548 aa20.55■□□□□ 0.88
SYNCRIP-202ENST00000369622 UNC13BO14795 1591 aa20.53■□□□□ 0.88
SYNCRIP-202ENST00000369622 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
SYNCRIP-202ENST00000369622 KDM2BQ8NHM5 1336 aa20.52■□□□□ 0.88
SYNCRIP-202ENST00000369622 RRP7AQ9Y3A4 280 aaKnown RBP20.52■□□□□ 0.88
SYNCRIP-202ENST00000369622 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
SYNCRIP-202ENST00000369622 FAM161AQ3B820 660 aa20.52■□□□□ 0.88
SYNCRIP-202ENST00000369622 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
SYNCRIP-202ENST00000369622 EIF2AK4Q9P2K8 1649 aaKnown RBP20.52■□□□□ 0.87
SYNCRIP-202ENST00000369622 PANK2Q9BZ23 570 aa20.51■□□□□ 0.87
SYNCRIP-202ENST00000369622 GZF1Q9H116 711 aaPredicted RBP20.51■□□□□ 0.87
SYNCRIP-202ENST00000369622 PLCH2O75038 1416 aa20.51■□□□□ 0.87
SYNCRIP-202ENST00000369622 IQGAP3Q86VI3 1631 aa20.5■□□□□ 0.87
SYNCRIP-202ENST00000369622 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
SYNCRIP-202ENST00000369622 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
SYNCRIP-202ENST00000369622 ARID3AQ99856 593 aa20.49■□□□□ 0.87
SYNCRIP-202ENST00000369622 ZNF521Q96K83 1311 aa20.49■□□□□ 0.87
SYNCRIP-202ENST00000369622 SCAF11Q99590 1463 aaKnown RBP20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 AAMPQ13685 434 aa20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 CARD14Q9BXL6 1004 aa20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 MAST1Q9Y2H9 1570 aa20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
SYNCRIP-202ENST00000369622 EIF3AQ14152 1382 aaKnown RBP20.47■□□□□ 0.87
SYNCRIP-202ENST00000369622 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
SYNCRIP-202ENST00000369622 PANK1Q8TE04 598 aa20.47■□□□□ 0.87
SYNCRIP-202ENST00000369622 INSRP06213 1382 aa20.46■□□□□ 0.87
SYNCRIP-202ENST00000369622 KANK1Q14678 1352 aa20.46■□□□□ 0.87
SYNCRIP-202ENST00000369622 ATP10AO60312 1499 aa20.45■□□□□ 0.86
SYNCRIP-202ENST00000369622 E9PSI1 815 aa20.45■□□□□ 0.86
SYNCRIP-202ENST00000369622 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
SYNCRIP-202ENST00000369622 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
SYNCRIP-202ENST00000369622 ABCC2Q92887 1545 aa20.44■□□□□ 0.86
SYNCRIP-202ENST00000369622 IGHDP01880 384 aa20.44■□□□□ 0.86
SYNCRIP-202ENST00000369622 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
SYNCRIP-202ENST00000369622 PLXNC1O60486 1568 aa20.43■□□□□ 0.86
SYNCRIP-202ENST00000369622 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
SYNCRIP-202ENST00000369622 SCAPERQ9BY12 1400 aa20.42■□□□□ 0.86
SYNCRIP-202ENST00000369622 LAMC1P11047 1609 aa20.42■□□□□ 0.86
SYNCRIP-202ENST00000369622 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
SYNCRIP-202ENST00000369622 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
SYNCRIP-202ENST00000369622 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
SYNCRIP-202ENST00000369622 XRCC6P12956 609 aaKnown RBP eCLIP20.41■□□□□ 0.864e-6■■■■□ 25.4
SYNCRIP-202ENST00000369622 CLUAP1Q96AJ1 413 aa20.4■□□□□ 0.86
SYNCRIP-202ENST00000369622 CHD1O14646 1710 aa20.4■□□□□ 0.86
SYNCRIP-202ENST00000369622 FGD1P98174 961 aa20.39■□□□□ 0.85
SYNCRIP-202ENST00000369622 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
SYNCRIP-202ENST00000369622 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
SYNCRIP-202ENST00000369622 GGT6Q6P531 493 aa20.39■□□□□ 0.85
SYNCRIP-202ENST00000369622 PIK3C2GO75747 1445 aa20.38■□□□□ 0.85
SYNCRIP-202ENST00000369622 STAC3Q96MF2 364 aa20.38■□□□□ 0.85
SYNCRIP-202ENST00000369622 CLCN1P35523 988 aa20.38■□□□□ 0.85
SYNCRIP-202ENST00000369622 TRMT2AQ8IZ69 625 aaKnown RBP20.38■□□□□ 0.85
SYNCRIP-202ENST00000369622 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
SYNCRIP-202ENST00000369622 MADDQ8WXG6 1647 aa20.37■□□□□ 0.85
SYNCRIP-202ENST00000369622 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.857e-11■□□□□ 8.5
SYNCRIP-202ENST00000369622 PDE4CQ08493 712 aa20.36■□□□□ 0.85
SYNCRIP-202ENST00000369622 SPRYD3Q8NCJ5 442 aa20.36■□□□□ 0.85
SYNCRIP-202ENST00000369622 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
SYNCRIP-202ENST00000369622 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
SYNCRIP-202ENST00000369622 TNNQ9UQP3 1299 aa20.35■□□□□ 0.85
SYNCRIP-202ENST00000369622 ABCC1P33527 1531 aa20.34■□□□□ 0.85
SYNCRIP-202ENST00000369622 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.84
SYNCRIP-202ENST00000369622 SEC24BO95487 1268 aa20.33■□□□□ 0.84
SYNCRIP-202ENST00000369622 CLTCL1P53675 1640 aa20.33■□□□□ 0.84
SYNCRIP-202ENST00000369622 MTHFSP49914 203 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms