RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PTPRGP23470 1445 aa15.84■□□□□ 0.13
PHGDH-201ENST00000369407 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
PHGDH-201ENST00000369407 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
PHGDH-201ENST00000369407 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
PHGDH-201ENST00000369407 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
PHGDH-201ENST00000369407 BCL2L13Q9BXK5 485 aa15.81■□□□□ 0.12
PHGDH-201ENST00000369407 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
PHGDH-201ENST00000369407 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
PHGDH-201ENST00000369407 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-201ENST00000369407 INSRP06213 1382 aa15.8■□□□□ 0.12
PHGDH-201ENST00000369407 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
PHGDH-201ENST00000369407 BECN1Q14457 450 aa15.79■□□□□ 0.12
PHGDH-201ENST00000369407 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
PHGDH-201ENST00000369407 CLUAP1Q96AJ1 413 aa15.79■□□□□ 0.12
PHGDH-201ENST00000369407 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
PHGDH-201ENST00000369407 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
PHGDH-201ENST00000369407 ATP10BO94823 1461 aa15.78■□□□□ 0.12
PHGDH-201ENST00000369407 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-201ENST00000369407 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-201ENST00000369407 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
PHGDH-201ENST00000369407 NAP1L5Q96NT1 182 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-201ENST00000369407 EIF3AQ14152 1382 aaKnown RBP15.77■□□□□ 0.12
PHGDH-201ENST00000369407 PANK2Q9BZ23 570 aa15.77■□□□□ 0.12
PHGDH-201ENST00000369407 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
PHGDH-201ENST00000369407 CENPJQ9HC77 1338 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-201ENST00000369407 ADCY10Q96PN6 1610 aa15.76■□□□□ 0.11
PHGDH-201ENST00000369407 E9PSI1 815 aa15.75■□□□□ 0.11
PHGDH-201ENST00000369407 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
PHGDH-201ENST00000369407 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
PHGDH-201ENST00000369407 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
PHGDH-201ENST00000369407 ANTXR1Q9H6X2 564 aa15.74■□□□□ 0.11
PHGDH-201ENST00000369407 CARMIL2Q6F5E8 1435 aa15.74■□□□□ 0.11
PHGDH-201ENST00000369407 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
PHGDH-201ENST00000369407 RLBP1P12271 317 aa15.74■□□□□ 0.11
PHGDH-201ENST00000369407 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.115e-6■■□□□ 11.5
PHGDH-201ENST00000369407 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
PHGDH-201ENST00000369407 CCDC141Q6ZP82 1450 aa15.72■□□□□ 0.11
PHGDH-201ENST00000369407 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
PHGDH-201ENST00000369407 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
PHGDH-201ENST00000369407 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
PHGDH-201ENST00000369407 WWC1Q8IX03 1113 aa15.71■□□□□ 0.11
PHGDH-201ENST00000369407 UPF2Q9HAU5 1272 aaKnown RBP15.71■□□□□ 0.11
PHGDH-201ENST00000369407 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
PHGDH-201ENST00000369407 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
PHGDH-201ENST00000369407 GOLGA6L3A6NEY3 463 aa15.69■□□□□ 0.1
PHGDH-201ENST00000369407 TBC1D32Q96NH3 1257 aa15.69■□□□□ 0.1
PHGDH-201ENST00000369407 NLRP1Q9C000 1473 aa15.69■□□□□ 0.1
PHGDH-201ENST00000369407 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-201ENST00000369407 CARD14Q9BXL6 1004 aa15.69■□□□□ 0.1
PHGDH-201ENST00000369407 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
PHGDH-201ENST00000369407 MFAP1P55081 439 aaKnown RBP15.68■□□□□ 0.1
PHGDH-201ENST00000369407 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
PHGDH-201ENST00000369407 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
PHGDH-201ENST00000369407 MYO5CQ9NQX4 1742 aa15.67■□□□□ 0.1
PHGDH-201ENST00000369407 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
PHGDH-201ENST00000369407 ABCA8O94911 1581 aa15.66■□□□□ 0.1
PHGDH-201ENST00000369407 PIK3C2GO75747 1445 aa15.66■□□□□ 0.1
PHGDH-201ENST00000369407 RARSP54136 660 aaKnown RBP15.66■□□□□ 0.1
PHGDH-201ENST00000369407 MCM4P33991 863 aa15.66■□□□□ 0.1
PHGDH-201ENST00000369407 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
PHGDH-201ENST00000369407 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
PHGDH-201ENST00000369407 CFAP70Q5T0N1 1121 aa15.64■□□□□ 0.09
PHGDH-201ENST00000369407 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
PHGDH-201ENST00000369407 PMFBP1Q8TBY8 1022 aa15.63■□□□□ 0.09
PHGDH-201ENST00000369407 TRAK2O60296 914 aa15.63■□□□□ 0.09
PHGDH-201ENST00000369407 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
PHGDH-201ENST00000369407 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
PHGDH-201ENST00000369407 NUP160Q12769 1436 aa15.62■□□□□ 0.09
PHGDH-201ENST00000369407 EIF2AK4Q9P2K8 1649 aaKnown RBP15.62■□□□□ 0.09
PHGDH-201ENST00000369407 LAMC1P11047 1609 aa15.62■□□□□ 0.09
PHGDH-201ENST00000369407 ARHGAP5Q13017 1502 aa15.62■□□□□ 0.09
PHGDH-201ENST00000369407 C22orf23Q9BZE7 217 aa15.61■□□□□ 0.09
PHGDH-201ENST00000369407 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
PHGDH-201ENST00000369407 FSD2A1L4K1 749 aa15.6■□□□□ 0.09
PHGDH-201ENST00000369407 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-201ENST00000369407 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
PHGDH-201ENST00000369407 SCAF11Q99590 1463 aaKnown RBP15.59■□□□□ 0.09
PHGDH-201ENST00000369407 HSP90AA1P07900 732 aaKnown RBP15.59■□□□□ 0.09
PHGDH-201ENST00000369407 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
PHGDH-201ENST00000369407 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
PHGDH-201ENST00000369407 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
PHGDH-201ENST00000369407 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
PHGDH-201ENST00000369407 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
PHGDH-201ENST00000369407 SYNMO15061 1565 aa15.57■□□□□ 0.08
PHGDH-201ENST00000369407 VIRMAQ69YN4 1812 aaKnown RBP15.57■□□□□ 0.08
PHGDH-201ENST00000369407 FTSJ3Q8IY81 847 aaKnown RBP15.57■□□□□ 0.08
PHGDH-201ENST00000369407 UNC13BO14795 1591 aa15.56■□□□□ 0.08
PHGDH-201ENST00000369407 SLC12A5Q9H2X9 1139 aa15.56■□□□□ 0.08
PHGDH-201ENST00000369407 RUNDC1Q96C34 613 aa15.55■□□□□ 0.08
PHGDH-201ENST00000369407 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
PHGDH-201ENST00000369407 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
PHGDH-201ENST00000369407 CLCN1P35523 988 aa15.55■□□□□ 0.08
PHGDH-201ENST00000369407 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
PHGDH-201ENST00000369407 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
PHGDH-201ENST00000369407 GRPEL1Q9HAV7 217 aa15.54■□□□□ 0.08
PHGDH-201ENST00000369407 MTHFSP49914 203 aa15.54■□□□□ 0.08
PHGDH-201ENST00000369407 MADDQ8WXG6 1647 aa15.54■□□□□ 0.08
PHGDH-201ENST00000369407 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
PHGDH-201ENST00000369407 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
PHGDH-201ENST00000369407 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms