RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01561-201ENST00000369071 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
LINC01561-201ENST00000369071 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
LINC01561-201ENST00000369071 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
LINC01561-201ENST00000369071 SCAF11Q99590 1463 aaKnown RBP16.44■□□□□ 0.22
LINC01561-201ENST00000369071 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
LINC01561-201ENST00000369071 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
LINC01561-201ENST00000369071 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
LINC01561-201ENST00000369071 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
LINC01561-201ENST00000369071 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
LINC01561-201ENST00000369071 MYOM1P52179 1685 aa16.43■□□□□ 0.22
LINC01561-201ENST00000369071 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
LINC01561-201ENST00000369071 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
LINC01561-201ENST00000369071 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
LINC01561-201ENST00000369071 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
LINC01561-201ENST00000369071 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
LINC01561-201ENST00000369071 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
LINC01561-201ENST00000369071 TRPM2O94759 1503 aa16.42■□□□□ 0.22
LINC01561-201ENST00000369071 PLCH2O75038 1416 aa16.41■□□□□ 0.22
LINC01561-201ENST00000369071 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
LINC01561-201ENST00000369071 CEP152O94986 1710 aa16.4■□□□□ 0.22
LINC01561-201ENST00000369071 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
LINC01561-201ENST00000369071 PTPRTO14522 1441 aa16.4■□□□□ 0.22
LINC01561-201ENST00000369071 ABCC1P33527 1531 aa16.39■□□□□ 0.21
LINC01561-201ENST00000369071 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
LINC01561-201ENST00000369071 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
LINC01561-201ENST00000369071 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
LINC01561-201ENST00000369071 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
LINC01561-201ENST00000369071 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
LINC01561-201ENST00000369071 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
LINC01561-201ENST00000369071 CHD1O14646 1710 aa16.37■□□□□ 0.21
LINC01561-201ENST00000369071 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
LINC01561-201ENST00000369071 EFCAB2Q5VUJ9 269 aa16.37■□□□□ 0.21
LINC01561-201ENST00000369071 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
LINC01561-201ENST00000369071 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
LINC01561-201ENST00000369071 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
LINC01561-201ENST00000369071 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
LINC01561-201ENST00000369071 ERCC6L2Q5T890 1561 aa16.35■□□□□ 0.21
LINC01561-201ENST00000369071 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
LINC01561-201ENST00000369071 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
LINC01561-201ENST00000369071 GSE1Q14687 1217 aa16.34■□□□□ 0.21
LINC01561-201ENST00000369071 APAF1O14727 1248 aa16.34■□□□□ 0.21
LINC01561-201ENST00000369071 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.21
LINC01561-201ENST00000369071 DEPDC5O75140 1603 aa16.33■□□□□ 0.21
LINC01561-201ENST00000369071 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
LINC01561-201ENST00000369071 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
LINC01561-201ENST00000369071 E9PSI1 815 aa16.32■□□□□ 0.2
LINC01561-201ENST00000369071 BCAR3O75815 825 aa16.32■□□□□ 0.2
LINC01561-201ENST00000369071 RGS3P49796 1198 aa16.32■□□□□ 0.2
LINC01561-201ENST00000369071 TET3O43151 1660 aa16.31■□□□□ 0.2
LINC01561-201ENST00000369071 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
LINC01561-201ENST00000369071 NEURL4Q96JN8 1562 aa16.31■□□□□ 0.2
LINC01561-201ENST00000369071 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
LINC01561-201ENST00000369071 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
LINC01561-201ENST00000369071 NGEFQ8N5V2 710 aa16.3■□□□□ 0.2
LINC01561-201ENST00000369071 SPAG9O60271 1321 aaKnown RBP16.3■□□□□ 0.2
LINC01561-201ENST00000369071 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
LINC01561-201ENST00000369071 VWDEQ8N2E2 1590 aa16.29■□□□□ 0.2
LINC01561-201ENST00000369071 IGHDP01880 384 aa16.28■□□□□ 0.2
LINC01561-201ENST00000369071 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
LINC01561-201ENST00000369071 VIRMAQ69YN4 1812 aaKnown RBP16.28■□□□□ 0.2
LINC01561-201ENST00000369071 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
LINC01561-201ENST00000369071 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
LINC01561-201ENST00000369071 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
LINC01561-201ENST00000369071 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
LINC01561-201ENST00000369071 PDE3AQ14432 1141 aa16.27■□□□□ 0.19
LINC01561-201ENST00000369071 AFAP1Q8N556 730 aa16.27■□□□□ 0.19
LINC01561-201ENST00000369071 MYOM2P54296 1465 aa16.27■□□□□ 0.19
LINC01561-201ENST00000369071 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 ARAP3Q8WWN8 1544 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 UHRF1BP1LA0JNW5 1464 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 USP19O94966 1318 aa16.26■□□□□ 0.19
LINC01561-201ENST00000369071 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
LINC01561-201ENST00000369071 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
LINC01561-201ENST00000369071 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
LINC01561-201ENST00000369071 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
LINC01561-201ENST00000369071 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
LINC01561-201ENST00000369071 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
LINC01561-201ENST00000369071 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
LINC01561-201ENST00000369071 KANK1Q14678 1352 aa16.23■□□□□ 0.19
LINC01561-201ENST00000369071 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
LINC01561-201ENST00000369071 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
LINC01561-201ENST00000369071 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
LINC01561-201ENST00000369071 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
LINC01561-201ENST00000369071 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
LINC01561-201ENST00000369071 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
LINC01561-201ENST00000369071 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.19
LINC01561-201ENST00000369071 SBNO2Q9Y2G9 1366 aa16.21■□□□□ 0.19
LINC01561-201ENST00000369071 IFT172Q9UG01 1749 aa16.21■□□□□ 0.19
LINC01561-201ENST00000369071 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
LINC01561-201ENST00000369071 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
LINC01561-201ENST00000369071 PANK1Q8TE04 598 aa16.2■□□□□ 0.18
LINC01561-201ENST00000369071 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
LINC01561-201ENST00000369071 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
LINC01561-201ENST00000369071 COG6Q9Y2V7 657 aa16.2■□□□□ 0.18
LINC01561-201ENST00000369071 SEC24BO95487 1268 aa16.19■□□□□ 0.18
LINC01561-201ENST00000369071 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
LINC01561-201ENST00000369071 KIF1BO60333 1816 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms