RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 IQGAP3Q86VI3 1631 aa26.91■■□□□ 1.9
C1orf43-204ENST00000368518 XIRP1Q702N8 1843 aaKnown RBP26.9■■□□□ 1.9
C1orf43-204ENST00000368518 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
C1orf43-204ENST00000368518 TMEM131LA2VDJ0 1609 aa26.88■■□□□ 1.89
C1orf43-204ENST00000368518 KCNA6P17658 529 aa26.88■■□□□ 1.89
C1orf43-204ENST00000368518 RIMS2Q9UQ26 1411 aa26.88■■□□□ 1.89
C1orf43-204ENST00000368518 RBM33Q96EV2 1170 aaKnown RBP26.87■■□□□ 1.89
C1orf43-204ENST00000368518 ZFYVE9O95405 1425 aa26.86■■□□□ 1.89
C1orf43-204ENST00000368518 NUTM2DQ5VT03 806 aaPredicted RBP26.85■■□□□ 1.89
C1orf43-204ENST00000368518 PROSER2Q86WR7 435 aaPredicted RBP26.85■■□□□ 1.89
C1orf43-204ENST00000368518 TMEM94Q12767 1356 aa26.84■■□□□ 1.89
C1orf43-204ENST00000368518 HDGFP51858 240 aaKnown RBP26.83■■□□□ 1.89
C1orf43-204ENST00000368518 PLEKHG1Q9ULL1 1385 aa26.82■■□□□ 1.88
C1orf43-204ENST00000368518 MED1Q15648 1581 aaPredicted RBP26.8■■□□□ 1.88
C1orf43-204ENST00000368518 RRBP1Q9P2E9 1410 aaKnown RBP26.8■■□□□ 1.88
C1orf43-204ENST00000368518 SOCS7O14512 581 aa26.79■■□□□ 1.88
C1orf43-204ENST00000368518 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
C1orf43-204ENST00000368518 NWD1Q149M9 1564 aa26.76■■□□□ 1.87
C1orf43-204ENST00000368518 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
C1orf43-204ENST00000368518 CHD2O14647 1828 aaKnown RBP26.72■■□□□ 1.87
C1orf43-204ENST00000368518 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
C1orf43-204ENST00000368518 SPHKAPQ2M3C7 1700 aa26.71■■□□□ 1.87
C1orf43-204ENST00000368518 NAIPQ13075 1403 aa26.7■■□□□ 1.86
C1orf43-204ENST00000368518 MSH6P52701 1360 aa26.69■■□□□ 1.86
C1orf43-204ENST00000368518 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
C1orf43-204ENST00000368518 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
C1orf43-204ENST00000368518 PHF23Q9BUL5 403 aaPredicted RBP26.68■■□□□ 1.86
C1orf43-204ENST00000368518 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
C1orf43-204ENST00000368518 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
C1orf43-204ENST00000368518 ROBO1Q9Y6N7 1651 aa26.65■■□□□ 1.86
C1orf43-204ENST00000368518 DIP2AQ14689 1571 aa26.63■■□□□ 1.85
C1orf43-204ENST00000368518 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
C1orf43-204ENST00000368518 SLAIN2Q9P270 581 aa26.61■■□□□ 1.85
C1orf43-204ENST00000368518 CLTCL1P53675 1640 aa26.61■■□□□ 1.85
C1orf43-204ENST00000368518 TRPM2O94759 1503 aa26.59■■□□□ 1.85
C1orf43-204ENST00000368518 HFM1A2PYH4 1435 aa26.58■■□□□ 1.85
C1orf43-204ENST00000368518 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
C1orf43-204ENST00000368518 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
C1orf43-204ENST00000368518 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
C1orf43-204ENST00000368518 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
C1orf43-204ENST00000368518 SLC4A1APQ9BWU0 796 aaKnown RBP26.54■■□□□ 1.84
C1orf43-204ENST00000368518 NCOA3Q9Y6Q9 1424 aa26.53■■□□□ 1.84
C1orf43-204ENST00000368518 KIF1BO60333 1816 aa26.52■■□□□ 1.84
C1orf43-204ENST00000368518 SETBP1Q9Y6X0 1596 aa26.52■■□□□ 1.84
C1orf43-204ENST00000368518 ATF3P18847 181 aa26.51■■□□□ 1.83
C1orf43-204ENST00000368518 C19orf44Q9H6X5 657 aa26.51■■□□□ 1.83
C1orf43-204ENST00000368518 PHLPP1O60346 1717 aa26.51■■□□□ 1.83
C1orf43-204ENST00000368518 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
C1orf43-204ENST00000368518 NEXMIFQ5QGS0 1516 aa26.5■■□□□ 1.83
C1orf43-204ENST00000368518 METP08581 1390 aa26.49■■□□□ 1.83
C1orf43-204ENST00000368518 CADPS2Q86UW7 1296 aa26.48■■□□□ 1.83
C1orf43-204ENST00000368518 FOXD1Q16676 465 aa26.46■■□□□ 1.83
C1orf43-204ENST00000368518 XRN1Q8IZH2 1706 aaKnown RBP26.45■■□□□ 1.83
C1orf43-204ENST00000368518 RGS17Q9UGC6 210 aaPredicted RBP26.45■■□□□ 1.82
C1orf43-204ENST00000368518 JCADQ9P266 1359 aa26.39■■□□□ 1.82
C1orf43-204ENST00000368518 VGFO15240 615 aaPredicted RBP26.39■■□□□ 1.82
C1orf43-204ENST00000368518 COL16A1Q07092 1604 aaPredicted RBP26.39■■□□□ 1.81
C1orf43-204ENST00000368518 BRINP3Q76B58 766 aa26.35■■□□□ 1.81
C1orf43-204ENST00000368518 RPGRIP1LQ68CZ1 1315 aa26.35■■□□□ 1.81
C1orf43-204ENST00000368518 DCCP43146 1447 aa26.34■■□□□ 1.81
C1orf43-204ENST00000368518 AHDC1Q5TGY3 1603 aaPredicted RBP26.33■■□□□ 1.81
C1orf43-204ENST00000368518 MPHOSPH9Q99550 1183 aa26.33■■□□□ 1.81
C1orf43-204ENST00000368518 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
C1orf43-204ENST00000368518 PPLO60437 1756 aa26.32■■□□□ 1.8
C1orf43-204ENST00000368518 MST1RQ04912 1400 aa26.31■■□□□ 1.8
C1orf43-204ENST00000368518 ADGRL3Q9HAR2 1447 aa26.31■■□□□ 1.8
C1orf43-204ENST00000368518 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
C1orf43-204ENST00000368518 SETD1AO15047 1707 aaKnown RBP26.3■■□□□ 1.8
C1orf43-204ENST00000368518 CCDC144AA2RUR9 1427 aa26.3■■□□□ 1.8
C1orf43-204ENST00000368518 NALCNQ8IZF0 1738 aa26.29■■□□□ 1.8
C1orf43-204ENST00000368518 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
C1orf43-204ENST00000368518 ROBO2Q9HCK4 1378 aa26.27■■□□□ 1.8
C1orf43-204ENST00000368518 MEX3CQ5U5Q3 659 aaKnown RBP26.26■■□□□ 1.79
C1orf43-204ENST00000368518 LRP6O75581 1613 aa26.25■■□□□ 1.79
C1orf43-204ENST00000368518 SPATA31A6Q5VVP1 1343 aa26.25■■□□□ 1.79
C1orf43-204ENST00000368518 PTCH1Q13635 1447 aa26.24■■□□□ 1.79
C1orf43-204ENST00000368518 ADGRF5Q8IZF2 1346 aa26.24■■□□□ 1.79
C1orf43-204ENST00000368518 DDX17Q92841 729 aaKnown RBP26.24■■□□□ 1.79
C1orf43-204ENST00000368518 SHPRHQ149N8 1683 aa26.23■■□□□ 1.79
C1orf43-204ENST00000368518 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
C1orf43-204ENST00000368518 NUTM2BA6NNL0 878 aaPredicted RBP26.22■■□□□ 1.79
C1orf43-204ENST00000368518 NUTM2EB1AL46 878 aaPredicted RBP26.22■■□□□ 1.79
C1orf43-204ENST00000368518 NUTM2AQ8IVF1 878 aaPredicted RBP26.22■■□□□ 1.79
C1orf43-204ENST00000368518 SPATA31E1Q6ZUB1 1445 aa26.21■■□□□ 1.79
C1orf43-204ENST00000368518 NHSL1Q5SYE7 1610 aa26.2■■□□□ 1.78
C1orf43-204ENST00000368518 STK26Q9P289 416 aa26.18■■□□□ 1.78
C1orf43-204ENST00000368518 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
C1orf43-204ENST00000368518 ANKRD30BQ9BXX2 1392 aa26.16■■□□□ 1.78
C1orf43-204ENST00000368518 IFT172Q9UG01 1749 aa26.16■■□□□ 1.78
C1orf43-204ENST00000368518 LRRC59Q96AG4 307 aaKnown RBP26.15■■□□□ 1.78
C1orf43-204ENST00000368518 ORAI2Q96SN7 254 aa26.14■■□□□ 1.78
C1orf43-204ENST00000368518 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.77
C1orf43-204ENST00000368518 RAB3GAP2Q9H2M9 1393 aa26.13■■□□□ 1.77
C1orf43-204ENST00000368518 TMEM132EQ6IEE7 984 aa26.13■■□□□ 1.77
C1orf43-204ENST00000368518 ACIN1Q9UKV3 1341 aaKnown RBP26.13■■□□□ 1.77
C1orf43-204ENST00000368518 ZNF772Q68DY9 489 aaPredicted RBP26.1■■□□□ 1.77
C1orf43-204ENST00000368518 WAPLQ7Z5K2 1190 aa26.1■■□□□ 1.77
C1orf43-204ENST00000368518 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
C1orf43-204ENST00000368518 PNPLA6Q8IY17 1366 aa26.07■■□□□ 1.76
C1orf43-204ENST00000368518 LRPPRCP42704 1394 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms