RNA–Protein interactions for RNA: ENST00000368517.7

SYCE1-203, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYCE1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-203ENST00000368517 SENP3Q9H4L4 574 aaPredicted RBP25.88■■□□□ 1.73
SYCE1-203ENST00000368517 NUP155O75694 1391 aa25.87■■□□□ 1.73
SYCE1-203ENST00000368517 RIMS2Q9UQ26 1411 aa25.87■■□□□ 1.73
SYCE1-203ENST00000368517 KCNA6P17658 529 aa25.85■■□□□ 1.73
SYCE1-203ENST00000368517 TMEM94Q12767 1356 aa25.85■■□□□ 1.73
SYCE1-203ENST00000368517 NWD1Q149M9 1564 aa25.84■■□□□ 1.73
SYCE1-203ENST00000368517 MED1Q15648 1581 aaPredicted RBP25.84■■□□□ 1.73
SYCE1-203ENST00000368517 RRBP1Q9P2E9 1410 aaKnown RBP25.84■■□□□ 1.73
SYCE1-203ENST00000368517 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
SYCE1-203ENST00000368517 RBM33Q96EV2 1170 aaKnown RBP25.82■■□□□ 1.72
SYCE1-203ENST00000368517 CHGAP10645 457 aaKnown RBP25.8■■□□□ 1.72
SYCE1-203ENST00000368517 BCANQ96GW7 911 aa25.79■■□□□ 1.72
SYCE1-203ENST00000368517 NKTRP30414 1462 aaKnown RBP25.79■■□□□ 1.72
SYCE1-203ENST00000368517 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
SYCE1-203ENST00000368517 SOCS7O14512 581 aa25.77■■□□□ 1.72
SYCE1-203ENST00000368517 PROSER2Q86WR7 435 aaPredicted RBP25.77■■□□□ 1.72
SYCE1-203ENST00000368517 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
SYCE1-203ENST00000368517 ADAMTS13Q76LX8 1427 aa25.75■■□□□ 1.71
SYCE1-203ENST00000368517 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
SYCE1-203ENST00000368517 NAIPQ13075 1403 aa25.74■■□□□ 1.71
SYCE1-203ENST00000368517 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
SYCE1-203ENST00000368517 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
SYCE1-203ENST00000368517 FAM135BQ49AJ0 1406 aa25.71■■□□□ 1.71
SYCE1-203ENST00000368517 HDGFP51858 240 aaKnown RBP25.7■■□□□ 1.71
SYCE1-203ENST00000368517 TBX22Q9Y458 520 aa25.7■■□□□ 1.71
SYCE1-203ENST00000368517 ROBO1Q9Y6N7 1651 aa25.66■■□□□ 1.7
SYCE1-203ENST00000368517 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
SYCE1-203ENST00000368517 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
SYCE1-203ENST00000368517 MSH6P52701 1360 aa25.64■■□□□ 1.7
SYCE1-203ENST00000368517 NRXN3Q9Y4C0 1643 aa25.64■■□□□ 1.69
SYCE1-203ENST00000368517 PTPRUQ92729 1446 aa25.63■■□□□ 1.69
SYCE1-203ENST00000368517 HFM1A2PYH4 1435 aa25.62■■□□□ 1.69
SYCE1-203ENST00000368517 TRPM2O94759 1503 aa25.61■■□□□ 1.69
SYCE1-203ENST00000368517 PIK3R4Q99570 1358 aa25.6■■□□□ 1.69
SYCE1-203ENST00000368517 SETBP1Q9Y6X0 1596 aa25.57■■□□□ 1.68
SYCE1-203ENST00000368517 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
SYCE1-203ENST00000368517 SLAIN2Q9P270 581 aa25.56■■□□□ 1.68
SYCE1-203ENST00000368517 NEXMIFQ5QGS0 1516 aa25.56■■□□□ 1.68
SYCE1-203ENST00000368517 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
SYCE1-203ENST00000368517 NCOA3Q9Y6Q9 1424 aa25.55■■□□□ 1.68
SYCE1-203ENST00000368517 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
SYCE1-203ENST00000368517 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
SYCE1-203ENST00000368517 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.53■■□□□ 1.68
SYCE1-203ENST00000368517 TRIM52Q96A61 297 aa25.53■■□□□ 1.68
SYCE1-203ENST00000368517 METP08581 1390 aa25.52■■□□□ 1.68
SYCE1-203ENST00000368517 RGS17Q9UGC6 210 aaPredicted RBP25.52■■□□□ 1.68
SYCE1-203ENST00000368517 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
SYCE1-203ENST00000368517 KIF1BO60333 1816 aa25.49■■□□□ 1.67
SYCE1-203ENST00000368517 PHLPP1O60346 1717 aa25.49■■□□□ 1.67
SYCE1-203ENST00000368517 C19orf44Q9H6X5 657 aa25.47■■□□□ 1.67
SYCE1-203ENST00000368517 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
SYCE1-203ENST00000368517 COL16A1Q07092 1604 aaPredicted RBP25.46■■□□□ 1.67
SYCE1-203ENST00000368517 FOXD1Q16676 465 aa25.44■■□□□ 1.66
SYCE1-203ENST00000368517 CADPS2Q86UW7 1296 aa25.44■■□□□ 1.66
SYCE1-203ENST00000368517 ATF3P18847 181 aa25.42■■□□□ 1.66
SYCE1-203ENST00000368517 SETD1AO15047 1707 aaKnown RBP25.41■■□□□ 1.66
SYCE1-203ENST00000368517 AHDC1Q5TGY3 1603 aaPredicted RBP25.39■■□□□ 1.66
SYCE1-203ENST00000368517 JCADQ9P266 1359 aa25.39■■□□□ 1.66
SYCE1-203ENST00000368517 DCCP43146 1447 aa25.39■■□□□ 1.65
SYCE1-203ENST00000368517 BRINP3Q76B58 766 aa25.37■■□□□ 1.65
SYCE1-203ENST00000368517 MST1RQ04912 1400 aa25.36■■□□□ 1.65
SYCE1-203ENST00000368517 PPLO60437 1756 aa25.36■■□□□ 1.65
SYCE1-203ENST00000368517 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
SYCE1-203ENST00000368517 POTEAQ6S8J7 498 aa25.35■■□□□ 1.65
SYCE1-203ENST00000368517 ADGRL3Q9HAR2 1447 aa25.35■■□□□ 1.65
SYCE1-203ENST00000368517 LRP6O75581 1613 aa25.33■■□□□ 1.65
SYCE1-203ENST00000368517 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
SYCE1-203ENST00000368517 ASXL1Q8IXJ9 1541 aa25.33■■□□□ 1.65
SYCE1-203ENST00000368517 RPGRIP1LQ68CZ1 1315 aa25.32■■□□□ 1.64
SYCE1-203ENST00000368517 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
SYCE1-203ENST00000368517 MPHOSPH9Q99550 1183 aa25.31■■□□□ 1.64
SYCE1-203ENST00000368517 PTCH1Q13635 1447 aa25.3■■□□□ 1.64
SYCE1-203ENST00000368517 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
SYCE1-203ENST00000368517 SHPRHQ149N8 1683 aa25.28■■□□□ 1.64
SYCE1-203ENST00000368517 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
SYCE1-203ENST00000368517 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
SYCE1-203ENST00000368517 NHSL1Q5SYE7 1610 aa25.26■■□□□ 1.63
SYCE1-203ENST00000368517 ADGRF5Q8IZF2 1346 aa25.26■■□□□ 1.63
SYCE1-203ENST00000368517 SPATA31A6Q5VVP1 1343 aa25.24■■□□□ 1.63
SYCE1-203ENST00000368517 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
SYCE1-203ENST00000368517 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
SYCE1-203ENST00000368517 IFT172Q9UG01 1749 aa25.23■■□□□ 1.63
SYCE1-203ENST00000368517 C1orf167Q5SNV9 1468 aa25.22■■□□□ 1.63
SYCE1-203ENST00000368517 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
SYCE1-203ENST00000368517 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
SYCE1-203ENST00000368517 RAB3GAP2Q9H2M9 1393 aa25.15■■□□□ 1.62
SYCE1-203ENST00000368517 ORAI2Q96SN7 254 aa25.15■■□□□ 1.62
SYCE1-203ENST00000368517 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
SYCE1-203ENST00000368517 NUTM2BA6NNL0 878 aaPredicted RBP25.14■■□□□ 1.61
SYCE1-203ENST00000368517 NUTM2EB1AL46 878 aaPredicted RBP25.14■■□□□ 1.61
SYCE1-203ENST00000368517 MEX3CQ5U5Q3 659 aaKnown RBP25.14■■□□□ 1.61
SYCE1-203ENST00000368517 NUTM2AQ8IVF1 878 aaPredicted RBP25.14■■□□□ 1.61
SYCE1-203ENST00000368517 LAMC1P11047 1609 aa25.13■■□□□ 1.61
SYCE1-203ENST00000368517 PNPLA6Q8IY17 1366 aa25.12■■□□□ 1.61
SYCE1-203ENST00000368517 TECPR2O15040 1411 aa25.12■■□□□ 1.61
SYCE1-203ENST00000368517 LRPPRCP42704 1394 aaKnown RBP25.11■■□□□ 1.61
SYCE1-203ENST00000368517 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
SYCE1-203ENST00000368517 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
SYCE1-203ENST00000368517 STK26Q9P289 416 aa25.1■■□□□ 1.61
SYCE1-203ENST00000368517 CDC42BPGQ6DT37 1551 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms