RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 ZMYM4Q5VZL5 1548 aa34.02■■■■□ 3.04
CLK2-203ENST00000368361 CHGAP10645 457 aaKnown RBP34.01■■■■□ 3.03
CLK2-203ENST00000368361 CFAP70Q5T0N1 1121 aa33.99■■■■□ 3.03
CLK2-203ENST00000368361 NRXN1Q9ULB1 1477 aa33.98■■■■□ 3.03
CLK2-203ENST00000368361 ZC3H13Q5T200 1668 aaKnown RBP33.98■■■■□ 3.03
CLK2-203ENST00000368361 NOS1P29475 1434 aa33.98■■■■□ 3.03
CLK2-203ENST00000368361 PER1O15534 1290 aaPredicted RBP33.96■■■■□ 3.03
CLK2-203ENST00000368361 KTN1Q86UP2 1357 aaKnown RBP33.96■■■■□ 3.03
CLK2-203ENST00000368361 RALBP1Q15311 655 aa33.94■■■■□ 3.02
CLK2-203ENST00000368361 PPLO60437 1756 aa33.93■■■■□ 3.02
CLK2-203ENST00000368361 SYNMO15061 1565 aa33.93■■■■□ 3.02
CLK2-203ENST00000368361 ARHGAP31Q2M1Z3 1444 aa33.92■■■■□ 3.02
CLK2-203ENST00000368361 EIF3AQ14152 1382 aaKnown RBP33.92■■■■□ 3.02
CLK2-203ENST00000368361 PIK3C2BO00750 1634 aa33.91■■■■□ 3.02
CLK2-203ENST00000368361 MYBBP1AQ9BQG0 1328 aaKnown RBP33.91■■■■□ 3.02
CLK2-203ENST00000368361 PANK3Q9H999 370 aa33.9■■■■□ 3.02
CLK2-203ENST00000368361 TMC1Q8TDI8 760 aa33.88■■■■□ 3.01
CLK2-203ENST00000368361 PARD3Q8TEW0 1356 aa33.87■■■■□ 3.01
CLK2-203ENST00000368361 ZBED9Q6R2W3 1325 aa33.86■■■■□ 3.01
CLK2-203ENST00000368361 PIK3C2GO75747 1445 aa33.85■■■■□ 3.01
CLK2-203ENST00000368361 FKBP8Q14318 412 aa33.84■■■■□ 3.01
CLK2-203ENST00000368361 PNISRQ8TF01 805 aaKnown RBP33.84■■■■□ 3.01
CLK2-203ENST00000368361 BRD4O60885 1362 aaPredicted RBP33.84■■■■□ 3.01
CLK2-203ENST00000368361 RPGRIP1LQ68CZ1 1315 aa33.83■■■■□ 3.01
CLK2-203ENST00000368361 KIF13AQ9H1H9 1805 aa33.82■■■■□ 3.01
CLK2-203ENST00000368361 CDCA8Q53HL2 280 aa33.81■■■■□ 3
CLK2-203ENST00000368361 SETBP1Q9Y6X0 1596 aa33.81■■■■□ 3
CLK2-203ENST00000368361 CC2D1BQ5T0F9 858 aaKnown RBP33.78■■■■□ 3
CLK2-203ENST00000368361 PREX1Q8TCU6 1659 aa33.78■■■■□ 3
CLK2-203ENST00000368361 REREQ9P2R6 1566 aa33.78■■■■□ 3
CLK2-203ENST00000368361 NEFLP07196 543 aa33.77■■■■□ 3
CLK2-203ENST00000368361 IDI1Q13907 227 aa33.77■■■■□ 3
CLK2-203ENST00000368361 C14orf93Q9H972 538 aaKnown RBP33.76■■■□□ 2.99
CLK2-203ENST00000368361 NEXMIFQ5QGS0 1516 aa33.75■■■□□ 2.99
CLK2-203ENST00000368361 NLRP13Q86W25 1043 aa33.75■■■□□ 2.99
CLK2-203ENST00000368361 MYOM1P52179 1685 aa33.75■■■□□ 2.99
CLK2-203ENST00000368361 MYO3AQ8NEV4 1616 aa33.75■■■□□ 2.99
CLK2-203ENST00000368361 KDM5AP29375 1690 aaKnown RBP33.74■■■□□ 2.99
CLK2-203ENST00000368361 SLC52A1Q9NWF4 448 aa33.72■■■□□ 2.99
CLK2-203ENST00000368361 ERVK-7P63135 1459 aa33.72■■■□□ 2.99
CLK2-203ENST00000368361 ADGRB1O14514 1584 aa33.72■■■□□ 2.99
CLK2-203ENST00000368361 AGLP35573 1532 aa33.72■■■□□ 2.99
CLK2-203ENST00000368361 LRPPRCP42704 1394 aaKnown RBP33.72■■■□□ 2.99
CLK2-203ENST00000368361 NUTM2DQ5VT03 806 aaPredicted RBP33.71■■■□□ 2.99
CLK2-203ENST00000368361 SLC24A1O60721 1099 aa33.69■■■□□ 2.98
CLK2-203ENST00000368361 BCANQ96GW7 911 aa33.68■■■□□ 2.98
CLK2-203ENST00000368361 VGFO15240 615 aaPredicted RBP33.67■■■□□ 2.98
CLK2-203ENST00000368361 MYO5BQ9ULV0 1848 aa33.67■■■□□ 2.98
CLK2-203ENST00000368361 FBXO31Q5XUX0 539 aaPredicted RBP33.66■■■□□ 2.98
CLK2-203ENST00000368361 TMEM132EQ6IEE7 984 aa33.66■■■□□ 2.98
CLK2-203ENST00000368361 TRAK1Q9UPV9 953 aa33.66■■■□□ 2.98
CLK2-203ENST00000368361 SBNO2Q9Y2G9 1366 aa33.66■■■□□ 2.98
CLK2-203ENST00000368361 KNSTRNQ9Y448 316 aa33.65■■■□□ 2.98
CLK2-203ENST00000368361 CENPJQ9HC77 1338 aaPredicted RBP33.65■■■□□ 2.98
CLK2-203ENST00000368361 TMEM131LA2VDJ0 1609 aa33.64■■■□□ 2.98
CLK2-203ENST00000368361 CLTCQ00610 1675 aaKnown RBP33.61■■■□□ 2.97
CLK2-203ENST00000368361 PPP6R1Q9UPN7 881 aa33.61■■■□□ 2.97
CLK2-203ENST00000368361 ARHGEF40Q8TER5 1519 aa33.61■■■□□ 2.97
CLK2-203ENST00000368361 AMER1Q5JTC6 1135 aaPredicted RBP33.6■■■□□ 2.97
CLK2-203ENST00000368361 QRICH2Q9H0J4 1663 aa33.59■■■□□ 2.97
CLK2-203ENST00000368361 SENP3-EIF4A1A0A087X0R7 540 aa33.58■■■□□ 2.97
CLK2-203ENST00000368361 ZFYVE9O95405 1425 aa33.57■■■□□ 2.97
CLK2-203ENST00000368361 ASXL1Q8IXJ9 1541 aa33.57■■■□□ 2.96
CLK2-203ENST00000368361 MLECQ14165 292 aa33.55■■■□□ 2.96
CLK2-203ENST00000368361 ARHGEF28Q8N1W1 1705 aaKnown RBP33.51■■■□□ 2.95
CLK2-203ENST00000368361 SMG6Q86US8 1419 aaKnown RBP33.51■■■□□ 2.95
CLK2-203ENST00000368361 NPC1L1Q9UHC9 1359 aa33.48■■■□□ 2.95
CLK2-203ENST00000368361 IRX6P78412 446 aaPredicted RBP33.48■■■□□ 2.95
CLK2-203ENST00000368361 SENP3Q9H4L4 574 aaPredicted RBP33.48■■■□□ 2.95
CLK2-203ENST00000368361 SPATA31D1Q6ZQQ2 1576 aa33.47■■■□□ 2.95
CLK2-203ENST00000368361 PPP2R1AP30153 589 aa33.47■■■□□ 2.95
CLK2-203ENST00000368361 CARD14Q9BXL6 1004 aa33.44■■■□□ 2.94
CLK2-203ENST00000368361 NUDCQ9Y266 331 aa33.44■■■□□ 2.94
CLK2-203ENST00000368361 PELP1Q8IZL8 1130 aaKnown RBP33.44■■■□□ 2.94
CLK2-203ENST00000368361 STAG3Q9UJ98 1225 aa33.44■■■□□ 2.94
CLK2-203ENST00000368361 INSRP06213 1382 aa33.38■■■□□ 2.93
CLK2-203ENST00000368361 BLMP54132 1417 aaPredicted RBP33.37■■■□□ 2.93
CLK2-203ENST00000368361 A2ML1A8K2U0 1454 aa33.36■■■□□ 2.93
CLK2-203ENST00000368361 TULP4Q9NRJ4 1543 aa33.36■■■□□ 2.93
CLK2-203ENST00000368361 STK26Q9P289 416 aa33.36■■■□□ 2.93
CLK2-203ENST00000368361 SLC12A5Q9H2X9 1139 aa33.35■■■□□ 2.93
CLK2-203ENST00000368361 EVC2Q86UK5 1308 aa33.33■■■□□ 2.93
CLK2-203ENST00000368361 ESF1Q9H501 851 aaKnown RBP33.33■■■□□ 2.93
CLK2-203ENST00000368361 SALL2Q9Y467 1007 aaPredicted RBP33.33■■■□□ 2.93
CLK2-203ENST00000368361 ALKQ9UM73 1620 aa33.33■■■□□ 2.93
CLK2-203ENST00000368361 ZMYM3Q14202 1370 aa33.33■■■□□ 2.93
CLK2-203ENST00000368361 SAFB2Q14151 953 aaKnown RBP eCLIP33.32■■■□□ 2.92
CLK2-203ENST00000368361 PTPRMP28827 1452 aa33.3■■■□□ 2.92
CLK2-203ENST00000368361 ADAMTS8Q9UP79 889 aa33.3■■■□□ 2.92
CLK2-203ENST00000368361 NSD3Q9BZ95 1437 aa33.3■■■□□ 2.92
CLK2-203ENST00000368361 YTHDC2Q9H6S0 1430 aaKnown RBP33.3■■■□□ 2.92
CLK2-203ENST00000368361 PUS7Q96PZ0 661 aaKnown RBP33.28■■■□□ 2.92
CLK2-203ENST00000368361 ERICH6BQ5W0A0 696 aa33.27■■■□□ 2.92
CLK2-203ENST00000368361 RIMS2Q9UQ26 1411 aa33.26■■■□□ 2.92
CLK2-203ENST00000368361 WDR43Q15061 677 aaKnown RBP eCLIP33.24■■■□□ 2.91
CLK2-203ENST00000368361 CABP2Q9NPB3 220 aa33.24■■■□□ 2.91
CLK2-203ENST00000368361 PRAM1Q96QH2 718 aa33.22■■■□□ 2.91
CLK2-203ENST00000368361 PDE3BQ13370 1112 aa33.2■■■□□ 2.91
CLK2-203ENST00000368361 RNF123Q5XPI4 1314 aa33.2■■■□□ 2.91
CLK2-203ENST00000368361 USP32Q8NFA0 1604 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms