RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TXNDC2Q86VQ3 553 aa27.48■■□□□ 1.99
LMNA-204ENST00000368298 HDGFP51858 240 aaKnown RBP27.46■■□□□ 1.99
LMNA-204ENST00000368298 NPHP4O75161 1426 aaPredicted RBP27.45■■□□□ 1.98
LMNA-204ENST00000368298 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
LMNA-204ENST00000368298 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.98
LMNA-204ENST00000368298 IQGAP1P46940 1657 aa27.42■■□□□ 1.98
LMNA-204ENST00000368298 SPATA31E1Q6ZUB1 1445 aa27.41■■□□□ 1.98
LMNA-204ENST00000368298 RPGRIP1LQ68CZ1 1315 aa27.38■■□□□ 1.97
LMNA-204ENST00000368298 DHX57Q6P158 1386 aaKnown RBP27.37■■□□□ 1.97
LMNA-204ENST00000368298 NEXMIFQ5QGS0 1516 aa27.37■■□□□ 1.97
LMNA-204ENST00000368298 ZNF326Q5BKZ1 582 aaKnown RBP27.37■■□□□ 1.97
LMNA-204ENST00000368298 PLEKHG1Q9ULL1 1385 aa27.36■■□□□ 1.97
LMNA-204ENST00000368298 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
LMNA-204ENST00000368298 PPLO60437 1756 aa27.31■■□□□ 1.96
LMNA-204ENST00000368298 VGFO15240 615 aaPredicted RBP27.29■■□□□ 1.96
LMNA-204ENST00000368298 NUTM2DQ5VT03 806 aaPredicted RBP27.29■■□□□ 1.96
LMNA-204ENST00000368298 RGL3Q3MIN7 710 aa27.28■■□□□ 1.96
LMNA-204ENST00000368298 FBXO41Q8TF61 875 aa27.28■■□□□ 1.96
LMNA-204ENST00000368298 IFT172Q9UG01 1749 aa27.28■■□□□ 1.96
LMNA-204ENST00000368298 CERKQ8TCT0 537 aa27.27■■□□□ 1.96
LMNA-204ENST00000368298 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.95
LMNA-204ENST00000368298 ADAMTS13Q76LX8 1427 aa27.25■■□□□ 1.95
LMNA-204ENST00000368298 TBX22Q9Y458 520 aa27.25■■□□□ 1.95
LMNA-204ENST00000368298 LTBP4Q8N2S1 1624 aa27.24■■□□□ 1.95
LMNA-204ENST00000368298 ZNF335Q9H4Z2 1342 aaPredicted RBP27.24■■□□□ 1.95
LMNA-204ENST00000368298 DIP2AQ14689 1571 aa27.23■■□□□ 1.95
LMNA-204ENST00000368298 NRXN3Q9Y4C0 1643 aa27.22■■□□□ 1.95
LMNA-204ENST00000368298 SLC26A8Q96RN1 970 aa27.22■■□□□ 1.95
LMNA-204ENST00000368298 BCANQ96GW7 911 aa27.2■■□□□ 1.95
LMNA-204ENST00000368298 STAC3Q96MF2 364 aa27.19■■□□□ 1.94
LMNA-204ENST00000368298 MYOM2P54296 1465 aa27.18■■□□□ 1.94
LMNA-204ENST00000368298 PIK3R4Q99570 1358 aa27.16■■□□□ 1.94
LMNA-204ENST00000368298 ADGRF5Q8IZF2 1346 aa27.16■■□□□ 1.94
LMNA-204ENST00000368298 NRXN1Q9ULB1 1477 aa27.15■■□□□ 1.94
LMNA-204ENST00000368298 STRCP1A6NGW2 1772 aa27.15■■□□□ 1.94
LMNA-204ENST00000368298 CPS1P31327 1500 aa27.15■■□□□ 1.94
LMNA-204ENST00000368298 KCNA6P17658 529 aa27.13■■□□□ 1.93
LMNA-204ENST00000368298 SIN3AQ96ST3 1273 aa27.13■■□□□ 1.93
LMNA-204ENST00000368298 SENP3Q9H4L4 574 aaPredicted RBP27.13■■□□□ 1.93
LMNA-204ENST00000368298 CHD2O14647 1828 aaKnown RBP27.13■■□□□ 1.93
LMNA-204ENST00000368298 PIK3C2GO75747 1445 aa27.12■■□□□ 1.93
LMNA-204ENST00000368298 NWD1Q149M9 1564 aa27.12■■□□□ 1.93
LMNA-204ENST00000368298 ALKQ9UM73 1620 aa27.12■■□□□ 1.93
LMNA-204ENST00000368298 SETD1AO15047 1707 aaKnown RBP27.11■■□□□ 1.93
LMNA-204ENST00000368298 DCAF11Q8TEB1 546 aa27.09■■□□□ 1.93
LMNA-204ENST00000368298 IQSEC2Q5JU85 1478 aa27.08■■□□□ 1.93
LMNA-204ENST00000368298 METP08581 1390 aa27.08■■□□□ 1.92
LMNA-204ENST00000368298 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
LMNA-204ENST00000368298 NKTRP30414 1462 aaKnown RBP27.06■■□□□ 1.92
LMNA-204ENST00000368298 NEUROD1Q13562 356 aa27.05■■□□□ 1.92
LMNA-204ENST00000368298 PTPRUQ92729 1446 aa27.05■■□□□ 1.92
LMNA-204ENST00000368298 C14orf93Q9H972 538 aaKnown RBP27.04■■□□□ 1.92
LMNA-204ENST00000368298 LRRC7Q96NW7 1537 aa27.04■■□□□ 1.92
LMNA-204ENST00000368298 KDM2AQ9Y2K7 1162 aa27.02■■□□□ 1.92
LMNA-204ENST00000368298 LAMC1P11047 1609 aa27.02■■□□□ 1.92
LMNA-204ENST00000368298 XRN1Q8IZH2 1706 aaKnown RBP27.01■■□□□ 1.91
LMNA-204ENST00000368298 L3MBTL2Q969R5 705 aa27.01■■□□□ 1.91
LMNA-204ENST00000368298 AMOTL2Q9Y2J4 779 aa27.01■■□□□ 1.91
LMNA-204ENST00000368298 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
LMNA-204ENST00000368298 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
LMNA-204ENST00000368298 CFAP70Q5T0N1 1121 aa26.96■■□□□ 1.91
LMNA-204ENST00000368298 NCOA3Q9Y6Q9 1424 aa26.95■■□□□ 1.91
LMNA-204ENST00000368298 PROSER2Q86WR7 435 aaPredicted RBP26.95■■□□□ 1.91
LMNA-204ENST00000368298 ASXL1Q8IXJ9 1541 aa26.95■■□□□ 1.9
LMNA-204ENST00000368298 TMEM94Q12767 1356 aa26.93■■□□□ 1.9
LMNA-204ENST00000368298 KIAA1210Q9ULL0 1709 aa26.92■■□□□ 1.9
LMNA-204ENST00000368298 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
LMNA-204ENST00000368298 ABCC11Q96J66 1382 aa26.91■■□□□ 1.9
LMNA-204ENST00000368298 TECPR2O15040 1411 aa26.91■■□□□ 1.9
LMNA-204ENST00000368298 PTCH1Q13635 1447 aa26.91■■□□□ 1.9
LMNA-204ENST00000368298 ADGRB1O14514 1584 aa26.91■■□□□ 1.9
LMNA-204ENST00000368298 TMEM132EQ6IEE7 984 aa26.9■■□□□ 1.9
LMNA-204ENST00000368298 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
LMNA-204ENST00000368298 TONSLQ96HA7 1378 aa26.9■■□□□ 1.9
LMNA-204ENST00000368298 YTHDC2Q9H6S0 1430 aaKnown RBP26.88■■□□□ 1.89
LMNA-204ENST00000368298 KNDC1Q76NI1 1749 aa26.87■■□□□ 1.89
LMNA-204ENST00000368298 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
LMNA-204ENST00000368298 ROBO2Q9HCK4 1378 aa26.86■■□□□ 1.89
LMNA-204ENST00000368298 SIRT1Q96EB6 747 aa26.85■■□□□ 1.89
LMNA-204ENST00000368298 RBM33Q96EV2 1170 aaKnown RBP26.84■■□□□ 1.89
LMNA-204ENST00000368298 FAM135BQ49AJ0 1406 aa26.81■■□□□ 1.88
LMNA-204ENST00000368298 STK26Q9P289 416 aa26.81■■□□□ 1.88
LMNA-204ENST00000368298 DLC1Q96QB1 1528 aa26.81■■□□□ 1.88
LMNA-204ENST00000368298 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
LMNA-204ENST00000368298 C19orf44Q9H6X5 657 aa26.8■■□□□ 1.88
LMNA-204ENST00000368298 MSH6P52701 1360 aa26.8■■□□□ 1.88
LMNA-204ENST00000368298 TRPM1Q7Z4N2 1603 aa26.79■■□□□ 1.88
LMNA-204ENST00000368298 TOM1O60784 492 aa26.78■■□□□ 1.88
LMNA-204ENST00000368298 NBPF8Q3BBV2 869 aa26.78■■□□□ 1.88
LMNA-204ENST00000368298 NBPF1Q3BBV0 1214 aa26.77■■□□□ 1.88
LMNA-204ENST00000368298 DCCP43146 1447 aa26.76■■□□□ 1.87
LMNA-204ENST00000368298 ADGRL3Q9HAR2 1447 aa26.76■■□□□ 1.87
LMNA-204ENST00000368298 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.76■■□□□ 1.87
LMNA-204ENST00000368298 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
LMNA-204ENST00000368298 C14orf37Q86TY3 774 aa26.74■■□□□ 1.87
LMNA-204ENST00000368298 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
LMNA-204ENST00000368298 TRAK1Q9UPV9 953 aa26.72■■□□□ 1.87
LMNA-204ENST00000368298 GPRASP1Q5JY77 1395 aa26.71■■□□□ 1.87
LMNA-204ENST00000368298 PLEKHH1Q9ULM0 1364 aa26.71■■□□□ 1.87
LMNA-204ENST00000368298 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms