RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IDI1Q13907 227 aa16.45■□□□□ 0.22
USF1-201ENST00000368019 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
USF1-201ENST00000368019 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
USF1-201ENST00000368019 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
USF1-201ENST00000368019 TET3O43151 1660 aa16.43■□□□□ 0.22
USF1-201ENST00000368019 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
USF1-201ENST00000368019 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
USF1-201ENST00000368019 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
USF1-201ENST00000368019 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
USF1-201ENST00000368019 RPRD2Q5VT52 1461 aaKnown RBP16.38■□□□□ 0.21
USF1-201ENST00000368019 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
USF1-201ENST00000368019 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
USF1-201ENST00000368019 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
USF1-201ENST00000368019 KCNA6P17658 529 aa16.37■□□□□ 0.21
USF1-201ENST00000368019 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
USF1-201ENST00000368019 FAM50AQ14320 339 aaKnown RBP16.35■□□□□ 0.21
USF1-201ENST00000368019 TMEM94Q12767 1356 aa16.35■□□□□ 0.21
USF1-201ENST00000368019 FAM135BQ49AJ0 1406 aa16.35■□□□□ 0.21
USF1-201ENST00000368019 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
USF1-201ENST00000368019 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
USF1-201ENST00000368019 SLC26A8Q96RN1 970 aa16.34■□□□□ 0.21
USF1-201ENST00000368019 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
USF1-201ENST00000368019 ZFYVE9O95405 1425 aa16.33■□□□□ 0.2
USF1-201ENST00000368019 UNC13BO14795 1591 aa16.33■□□□□ 0.2
USF1-201ENST00000368019 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.2
USF1-201ENST00000368019 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
USF1-201ENST00000368019 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
USF1-201ENST00000368019 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
USF1-201ENST00000368019 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
USF1-201ENST00000368019 E9PCH4 1651 aa16.3■□□□□ 0.2
USF1-201ENST00000368019 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
USF1-201ENST00000368019 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
USF1-201ENST00000368019 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
USF1-201ENST00000368019 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
USF1-201ENST00000368019 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
USF1-201ENST00000368019 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
USF1-201ENST00000368019 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.2
USF1-201ENST00000368019 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
USF1-201ENST00000368019 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
USF1-201ENST00000368019 BCANQ96GW7 911 aa16.23■□□□□ 0.19
USF1-201ENST00000368019 MSH6P52701 1360 aa16.23■□□□□ 0.19
USF1-201ENST00000368019 ADAMTS13Q76LX8 1427 aa16.22■□□□□ 0.19
USF1-201ENST00000368019 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
USF1-201ENST00000368019 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
USF1-201ENST00000368019 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.21■□□□□ 0.19
USF1-201ENST00000368019 SLAIN2Q9P270 581 aa16.21■□□□□ 0.19
USF1-201ENST00000368019 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
USF1-201ENST00000368019 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
USF1-201ENST00000368019 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
USF1-201ENST00000368019 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
USF1-201ENST00000368019 NUP155O75694 1391 aa16.18■□□□□ 0.18
USF1-201ENST00000368019 CHGAP10645 457 aaKnown RBP16.18■□□□□ 0.18
USF1-201ENST00000368019 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.18■□□□□ 0.18
USF1-201ENST00000368019 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
USF1-201ENST00000368019 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
USF1-201ENST00000368019 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
USF1-201ENST00000368019 SPHKAPQ2M3C7 1700 aa16.15■□□□□ 0.18
USF1-201ENST00000368019 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
USF1-201ENST00000368019 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
USF1-201ENST00000368019 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
USF1-201ENST00000368019 TRPM2O94759 1503 aa16.14■□□□□ 0.17
USF1-201ENST00000368019 JCADQ9P266 1359 aa16.13■□□□□ 0.17
USF1-201ENST00000368019 HFM1A2PYH4 1435 aa16.12■□□□□ 0.17
USF1-201ENST00000368019 ITGAEP38570 1179 aa16.12■□□□□ 0.17
USF1-201ENST00000368019 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
USF1-201ENST00000368019 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
USF1-201ENST00000368019 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
USF1-201ENST00000368019 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
USF1-201ENST00000368019 AHDC1Q5TGY3 1603 aaPredicted RBP16.11■□□□□ 0.17
USF1-201ENST00000368019 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
USF1-201ENST00000368019 C14orf37Q86TY3 774 aa16.08■□□□□ 0.16
USF1-201ENST00000368019 SHPRHQ149N8 1683 aa16.08■□□□□ 0.16
USF1-201ENST00000368019 ATF3P18847 181 aa16.07■□□□□ 0.16
USF1-201ENST00000368019 LRP6O75581 1613 aa16.07■□□□□ 0.16
USF1-201ENST00000368019 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
USF1-201ENST00000368019 DCCP43146 1447 aa16.06■□□□□ 0.16
USF1-201ENST00000368019 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
USF1-201ENST00000368019 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
USF1-201ENST00000368019 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
USF1-201ENST00000368019 KIF1BO60333 1816 aa16.05■□□□□ 0.16
USF1-201ENST00000368019 METP08581 1390 aa16.04■□□□□ 0.16
USF1-201ENST00000368019 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
USF1-201ENST00000368019 NAIPQ13075 1403 aa16.03■□□□□ 0.16
USF1-201ENST00000368019 SETD1AO15047 1707 aaKnown RBP16.03■□□□□ 0.16
USF1-201ENST00000368019 ANP32CO43423 234 aa16.03■□□□□ 0.16
USF1-201ENST00000368019 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
USF1-201ENST00000368019 NEFLP07196 543 aa16.02■□□□□ 0.16
USF1-201ENST00000368019 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.16
USF1-201ENST00000368019 MST1RQ04912 1400 aa16.02■□□□□ 0.15
USF1-201ENST00000368019 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
USF1-201ENST00000368019 ASXL1Q8IXJ9 1541 aa16.01■□□□□ 0.15
USF1-201ENST00000368019 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
USF1-201ENST00000368019 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
USF1-201ENST00000368019 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
USF1-201ENST00000368019 ADGRL3Q9HAR2 1447 aa15.99■□□□□ 0.15
USF1-201ENST00000368019 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
USF1-201ENST00000368019 ERICH6BQ5W0A0 696 aa15.96■□□□□ 0.15
USF1-201ENST00000368019 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
USF1-201ENST00000368019 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
USF1-201ENST00000368019 LAMC1P11047 1609 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms