RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
LMX1A-203ENST00000367893 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
LMX1A-203ENST00000367893 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
LMX1A-203ENST00000367893 HSPA1LP34931 641 aa18.71■□□□□ 0.59
LMX1A-203ENST00000367893 PIP4K2BP78356 416 aa18.71■□□□□ 0.59
LMX1A-203ENST00000367893 ADGRB3O60242 1522 aa18.71■□□□□ 0.58
LMX1A-203ENST00000367893 E9PCH4 1651 aa18.7■□□□□ 0.58
LMX1A-203ENST00000367893 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
LMX1A-203ENST00000367893 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
LMX1A-203ENST00000367893 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
LMX1A-203ENST00000367893 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
LMX1A-203ENST00000367893 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
LMX1A-203ENST00000367893 SLC26A8Q96RN1 970 aa18.63■□□□□ 0.57
LMX1A-203ENST00000367893 ANKRD30BQ9BXX2 1392 aa18.62■□□□□ 0.57
LMX1A-203ENST00000367893 KCNA6P17658 529 aa18.61■□□□□ 0.57
LMX1A-203ENST00000367893 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
LMX1A-203ENST00000367893 FOXD1Q16676 465 aa18.6■□□□□ 0.57
LMX1A-203ENST00000367893 RIMS2Q9UQ26 1411 aa18.59■□□□□ 0.57
LMX1A-203ENST00000367893 TMEM131LA2VDJ0 1609 aa18.59■□□□□ 0.57
LMX1A-203ENST00000367893 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
LMX1A-203ENST00000367893 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
LMX1A-203ENST00000367893 TRPM2O94759 1503 aa18.58■□□□□ 0.56
LMX1A-203ENST00000367893 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
LMX1A-203ENST00000367893 SOCS7O14512 581 aa18.56■□□□□ 0.56
LMX1A-203ENST00000367893 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
LMX1A-203ENST00000367893 NKTRP30414 1462 aaKnown RBP18.55■□□□□ 0.56
LMX1A-203ENST00000367893 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
LMX1A-203ENST00000367893 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
LMX1A-203ENST00000367893 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.56
LMX1A-203ENST00000367893 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
LMX1A-203ENST00000367893 ADAMTS13Q76LX8 1427 aa18.52■□□□□ 0.56
LMX1A-203ENST00000367893 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
LMX1A-203ENST00000367893 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
LMX1A-203ENST00000367893 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
LMX1A-203ENST00000367893 CLTCL1P53675 1640 aa18.51■□□□□ 0.55
LMX1A-203ENST00000367893 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
LMX1A-203ENST00000367893 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
LMX1A-203ENST00000367893 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
LMX1A-203ENST00000367893 BCANQ96GW7 911 aa18.49■□□□□ 0.55
LMX1A-203ENST00000367893 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
LMX1A-203ENST00000367893 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
LMX1A-203ENST00000367893 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
LMX1A-203ENST00000367893 NUTM2DQ5VT03 806 aaPredicted RBP18.48■□□□□ 0.55
LMX1A-203ENST00000367893 KIF1BO60333 1816 aa18.45■□□□□ 0.54
LMX1A-203ENST00000367893 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
LMX1A-203ENST00000367893 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
LMX1A-203ENST00000367893 MSH6P52701 1360 aa18.43■□□□□ 0.54
LMX1A-203ENST00000367893 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
LMX1A-203ENST00000367893 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
LMX1A-203ENST00000367893 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
LMX1A-203ENST00000367893 CHD2O14647 1828 aaKnown RBP18.42■□□□□ 0.54
LMX1A-203ENST00000367893 PTPRUQ92729 1446 aa18.42■□□□□ 0.54
LMX1A-203ENST00000367893 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
LMX1A-203ENST00000367893 SLAIN2Q9P270 581 aa18.4■□□□□ 0.54
LMX1A-203ENST00000367893 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
LMX1A-203ENST00000367893 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
LMX1A-203ENST00000367893 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
LMX1A-203ENST00000367893 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
LMX1A-203ENST00000367893 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
LMX1A-203ENST00000367893 AMOTL2Q9Y2J4 779 aa18.36■□□□□ 0.53
LMX1A-203ENST00000367893 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
LMX1A-203ENST00000367893 NEXMIFQ5QGS0 1516 aa18.35■□□□□ 0.53
LMX1A-203ENST00000367893 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
LMX1A-203ENST00000367893 METP08581 1390 aa18.35■□□□□ 0.53
LMX1A-203ENST00000367893 IFT172Q9UG01 1749 aa18.34■□□□□ 0.53
LMX1A-203ENST00000367893 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
LMX1A-203ENST00000367893 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
LMX1A-203ENST00000367893 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.53
LMX1A-203ENST00000367893 XRN1Q8IZH2 1706 aaKnown RBP18.31■□□□□ 0.52
LMX1A-203ENST00000367893 CADPS2Q86UW7 1296 aa18.31■□□□□ 0.52
LMX1A-203ENST00000367893 PPLO60437 1756 aa18.31■□□□□ 0.52
LMX1A-203ENST00000367893 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
LMX1A-203ENST00000367893 RGL3Q3MIN7 710 aa18.29■□□□□ 0.52
LMX1A-203ENST00000367893 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
LMX1A-203ENST00000367893 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
LMX1A-203ENST00000367893 DCCP43146 1447 aa18.29■□□□□ 0.52
LMX1A-203ENST00000367893 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
LMX1A-203ENST00000367893 ATF3P18847 181 aa18.27■□□□□ 0.52
LMX1A-203ENST00000367893 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.52
LMX1A-203ENST00000367893 MYOM2P54296 1465 aa18.27■□□□□ 0.51
LMX1A-203ENST00000367893 JCADQ9P266 1359 aa18.27■□□□□ 0.51
LMX1A-203ENST00000367893 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
LMX1A-203ENST00000367893 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
LMX1A-203ENST00000367893 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
LMX1A-203ENST00000367893 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
LMX1A-203ENST00000367893 PHLPP1O60346 1717 aa18.24■□□□□ 0.51
LMX1A-203ENST00000367893 MST1RQ04912 1400 aa18.24■□□□□ 0.51
LMX1A-203ENST00000367893 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
LMX1A-203ENST00000367893 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
LMX1A-203ENST00000367893 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
LMX1A-203ENST00000367893 POTEAQ6S8J7 498 aa18.23■□□□□ 0.51
LMX1A-203ENST00000367893 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
LMX1A-203ENST00000367893 ROBO2Q9HCK4 1378 aa18.2■□□□□ 0.5
LMX1A-203ENST00000367893 LRP6O75581 1613 aa18.2■□□□□ 0.5
LMX1A-203ENST00000367893 SETD1AO15047 1707 aaKnown RBP18.19■□□□□ 0.5
LMX1A-203ENST00000367893 ASXL1Q8IXJ9 1541 aa18.19■□□□□ 0.5
LMX1A-203ENST00000367893 NBPF8Q3BBV2 869 aa18.19■□□□□ 0.5
LMX1A-203ENST00000367893 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
LMX1A-203ENST00000367893 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
LMX1A-203ENST00000367893 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms