RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ADGRB3O60242 1522 aa22.1■■□□□ 1.13
SF3B5-201ENST00000367569 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
SF3B5-201ENST00000367569 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
SF3B5-201ENST00000367569 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
SF3B5-201ENST00000367569 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
SF3B5-201ENST00000367569 MED1Q15648 1581 aaPredicted RBP22.04■■□□□ 1.12
SF3B5-201ENST00000367569 TRIM52Q96A61 297 aa22.04■■□□□ 1.12
SF3B5-201ENST00000367569 KCNA6P17658 529 aa22.03■■□□□ 1.12
SF3B5-201ENST00000367569 TMEM131LA2VDJ0 1609 aa22.01■■□□□ 1.11
SF3B5-201ENST00000367569 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
SF3B5-201ENST00000367569 TMEM94Q12767 1356 aa22■■□□□ 1.11
SF3B5-201ENST00000367569 ZFYVE9O95405 1425 aa22■■□□□ 1.11
SF3B5-201ENST00000367569 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
SF3B5-201ENST00000367569 BCANQ96GW7 911 aa21.99■■□□□ 1.11
SF3B5-201ENST00000367569 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
SF3B5-201ENST00000367569 PROSER2Q86WR7 435 aaPredicted RBP21.97■■□□□ 1.11
SF3B5-201ENST00000367569 CHGAP10645 457 aaKnown RBP21.95■■□□□ 1.1
SF3B5-201ENST00000367569 PLEKHG1Q9ULL1 1385 aa21.95■■□□□ 1.1
SF3B5-201ENST00000367569 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
SF3B5-201ENST00000367569 TRPM2O94759 1503 aa21.95■■□□□ 1.1
SF3B5-201ENST00000367569 NWD1Q149M9 1564 aa21.95■■□□□ 1.1
SF3B5-201ENST00000367569 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
SF3B5-201ENST00000367569 HDGFP51858 240 aaKnown RBP21.93■■□□□ 1.1
SF3B5-201ENST00000367569 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
SF3B5-201ENST00000367569 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
SF3B5-201ENST00000367569 FOXD1Q16676 465 aa21.92■■□□□ 1.1
SF3B5-201ENST00000367569 KIF1BO60333 1816 aa21.92■■□□□ 1.1
SF3B5-201ENST00000367569 FAM135BQ49AJ0 1406 aa21.91■■□□□ 1.1
SF3B5-201ENST00000367569 NUTM2DQ5VT03 806 aaPredicted RBP21.91■■□□□ 1.1
SF3B5-201ENST00000367569 SLC4A1APQ9BWU0 796 aaKnown RBP21.91■■□□□ 1.1
SF3B5-201ENST00000367569 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
SF3B5-201ENST00000367569 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.89■■□□□ 1.09
SF3B5-201ENST00000367569 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
SF3B5-201ENST00000367569 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
SF3B5-201ENST00000367569 ADAMTS13Q76LX8 1427 aa21.86■■□□□ 1.09
SF3B5-201ENST00000367569 ROBO1Q9Y6N7 1651 aa21.85■■□□□ 1.09
SF3B5-201ENST00000367569 MSH6P52701 1360 aa21.85■■□□□ 1.09
SF3B5-201ENST00000367569 SLAIN2Q9P270 581 aa21.81■■□□□ 1.08
SF3B5-201ENST00000367569 MPHOSPH9Q99550 1183 aa21.8■■□□□ 1.08
SF3B5-201ENST00000367569 DIP2AQ14689 1571 aa21.79■■□□□ 1.08
SF3B5-201ENST00000367569 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
SF3B5-201ENST00000367569 RGS17Q9UGC6 210 aaPredicted RBP21.78■■□□□ 1.08
SF3B5-201ENST00000367569 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.08
SF3B5-201ENST00000367569 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
SF3B5-201ENST00000367569 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
SF3B5-201ENST00000367569 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
SF3B5-201ENST00000367569 PPLO60437 1756 aa21.76■■□□□ 1.07
SF3B5-201ENST00000367569 PTPRUQ92729 1446 aa21.75■■□□□ 1.07
SF3B5-201ENST00000367569 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
SF3B5-201ENST00000367569 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
SF3B5-201ENST00000367569 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
SF3B5-201ENST00000367569 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
SF3B5-201ENST00000367569 IFT172Q9UG01 1749 aa21.72■■□□□ 1.07
SF3B5-201ENST00000367569 C19orf44Q9H6X5 657 aa21.72■■□□□ 1.07
SF3B5-201ENST00000367569 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.72■■□□□ 1.07
SF3B5-201ENST00000367569 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
SF3B5-201ENST00000367569 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
SF3B5-201ENST00000367569 ATF3P18847 181 aa21.67■■□□□ 1.06
SF3B5-201ENST00000367569 SETD1AO15047 1707 aaKnown RBP21.66■■□□□ 1.06
SF3B5-201ENST00000367569 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
SF3B5-201ENST00000367569 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
SF3B5-201ENST00000367569 METP08581 1390 aa21.66■■□□□ 1.06
SF3B5-201ENST00000367569 JCADQ9P266 1359 aa21.66■■□□□ 1.06
SF3B5-201ENST00000367569 POTEAQ6S8J7 498 aa21.64■■□□□ 1.05
SF3B5-201ENST00000367569 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
SF3B5-201ENST00000367569 RGL3Q3MIN7 710 aa21.62■■□□□ 1.05
SF3B5-201ENST00000367569 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
SF3B5-201ENST00000367569 BRINP3Q76B58 766 aa21.6■■□□□ 1.05
SF3B5-201ENST00000367569 DCCP43146 1447 aa21.58■■□□□ 1.05
SF3B5-201ENST00000367569 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
SF3B5-201ENST00000367569 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
SF3B5-201ENST00000367569 MST1RQ04912 1400 aa21.55■■□□□ 1.04
SF3B5-201ENST00000367569 LRP6O75581 1613 aa21.55■■□□□ 1.04
SF3B5-201ENST00000367569 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
SF3B5-201ENST00000367569 VGFO15240 615 aaPredicted RBP21.54■■□□□ 1.04
SF3B5-201ENST00000367569 HRCP23327 699 aa21.53■■□□□ 1.04
SF3B5-201ENST00000367569 ASXL1Q8IXJ9 1541 aa21.53■■□□□ 1.04
SF3B5-201ENST00000367569 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
SF3B5-201ENST00000367569 SHPRHQ149N8 1683 aa21.53■■□□□ 1.04
SF3B5-201ENST00000367569 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
SF3B5-201ENST00000367569 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.03
SF3B5-201ENST00000367569 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.03
SF3B5-201ENST00000367569 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
SF3B5-201ENST00000367569 MEX3CQ5U5Q3 659 aaKnown RBP21.49■■□□□ 1.03
SF3B5-201ENST00000367569 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
SF3B5-201ENST00000367569 NHSL1Q5SYE7 1610 aa21.48■■□□□ 1.03
SF3B5-201ENST00000367569 DDX17Q92841 729 aaKnown RBP21.48■■□□□ 1.03
SF3B5-201ENST00000367569 PTCH1Q13635 1447 aa21.47■■□□□ 1.03
SF3B5-201ENST00000367569 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
SF3B5-201ENST00000367569 MYOM2P54296 1465 aa21.46■■□□□ 1.03
SF3B5-201ENST00000367569 NUTM2BA6NNL0 878 aaPredicted RBP21.45■■□□□ 1.02
SF3B5-201ENST00000367569 NUTM2EB1AL46 878 aaPredicted RBP21.45■■□□□ 1.02
SF3B5-201ENST00000367569 NUTM2AQ8IVF1 878 aaPredicted RBP21.45■■□□□ 1.02
SF3B5-201ENST00000367569 LAMC1P11047 1609 aa21.44■■□□□ 1.02
SF3B5-201ENST00000367569 LRRC59Q96AG4 307 aaKnown RBP21.43■■□□□ 1.02
SF3B5-201ENST00000367569 PRAG1Q86YV5 1406 aa21.43■■□□□ 1.02
SF3B5-201ENST00000367569 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
SF3B5-201ENST00000367569 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
SF3B5-201ENST00000367569 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
SF3B5-201ENST00000367569 KNDC1Q76NI1 1749 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms