RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
EDEM3-202ENST00000367512 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
EDEM3-202ENST00000367512 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
EDEM3-202ENST00000367512 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
EDEM3-202ENST00000367512 ODF2Q5BJF6 829 aa16.28■□□□□ 0.2
EDEM3-202ENST00000367512 ACBD3Q9H3P7 528 aa16.28■□□□□ 0.2
EDEM3-202ENST00000367512 MPNDQ8N594 471 aa16.28■□□□□ 0.2
EDEM3-202ENST00000367512 BRPF3Q9ULD4 1205 aa16.27■□□□□ 0.2
EDEM3-202ENST00000367512 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.2
EDEM3-202ENST00000367512 MTMR7Q9Y216 660 aa16.27■□□□□ 0.19
EDEM3-202ENST00000367512 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
EDEM3-202ENST00000367512 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
EDEM3-202ENST00000367512 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
EDEM3-202ENST00000367512 ZKSCAN1P17029 563 aaPredicted RBP16.26■□□□□ 0.19
EDEM3-202ENST00000367512 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
EDEM3-202ENST00000367512 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
EDEM3-202ENST00000367512 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
EDEM3-202ENST00000367512 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
EDEM3-202ENST00000367512 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
EDEM3-202ENST00000367512 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
EDEM3-202ENST00000367512 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
EDEM3-202ENST00000367512 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
EDEM3-202ENST00000367512 IL27Q8NEV9 243 aa16.24■□□□□ 0.19
EDEM3-202ENST00000367512 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
EDEM3-202ENST00000367512 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
EDEM3-202ENST00000367512 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
EDEM3-202ENST00000367512 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
EDEM3-202ENST00000367512 FYB1O15117 783 aa16.23■□□□□ 0.19
EDEM3-202ENST00000367512 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
EDEM3-202ENST00000367512 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
EDEM3-202ENST00000367512 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 CCDC73Q6ZRK6 1079 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 OFD1O75665 1012 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
EDEM3-202ENST00000367512 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 SPC24Q8NBT2 197 aa16.22■□□□□ 0.19
EDEM3-202ENST00000367512 MPHOSPH9Q99550 1183 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 REC8O95072 547 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
EDEM3-202ENST00000367512 EPS15P42566 896 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
EDEM3-202ENST00000367512 SMC2O95347 1197 aa16.21■□□□□ 0.18
EDEM3-202ENST00000367512 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
EDEM3-202ENST00000367512 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
EDEM3-202ENST00000367512 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
EDEM3-202ENST00000367512 NOL10Q9BSC4 688 aaKnown RBP16.19■□□□□ 0.18
EDEM3-202ENST00000367512 AMOTL1Q8IY63 956 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 TRIM5Q9C035 493 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 ANKRD62A6NC57 917 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
EDEM3-202ENST00000367512 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
EDEM3-202ENST00000367512 CCDC66A2RUB6 948 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 TRDNQ13061 729 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
EDEM3-202ENST00000367512 LEKR1Q6ZMV7 388 aa16.18■□□□□ 0.18
EDEM3-202ENST00000367512 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
EDEM3-202ENST00000367512 OLFM4Q6UX06 510 aa16.18■□□□□ 0.18
EDEM3-202ENST00000367512 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
EDEM3-202ENST00000367512 EEA1Q15075 1411 aa16.18■□□□□ 0.18
EDEM3-202ENST00000367512 NEFHP12036 1026 aa16.17■□□□□ 0.18
EDEM3-202ENST00000367512 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
EDEM3-202ENST00000367512 PANK3Q9H999 370 aa16.17■□□□□ 0.18
EDEM3-202ENST00000367512 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
EDEM3-202ENST00000367512 IBSPP21815 317 aaPredicted RBP16.17■□□□□ 0.18
EDEM3-202ENST00000367512 CCDC173Q0VFZ6 552 aa16.17■□□□□ 0.18
EDEM3-202ENST00000367512 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
EDEM3-202ENST00000367512 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 NUP155O75694 1391 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 ERICH2A1L162 156 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 ERICH4A6NGS2 130 aa16.16■□□□□ 0.18
EDEM3-202ENST00000367512 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
EDEM3-202ENST00000367512 CT47B1P0C2W7 299 aaPredicted RBP16.15■□□□□ 0.18
EDEM3-202ENST00000367512 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
EDEM3-202ENST00000367512 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
EDEM3-202ENST00000367512 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
EDEM3-202ENST00000367512 FAM193AP78312 1265 aa16.15■□□□□ 0.18
EDEM3-202ENST00000367512 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
EDEM3-202ENST00000367512 CENPHQ9H3R5 247 aa16.14■□□□□ 0.17
EDEM3-202ENST00000367512 APAF1O14727 1248 aa16.14■□□□□ 0.17
EDEM3-202ENST00000367512 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
EDEM3-202ENST00000367512 NUCB2P80303 420 aa16.14■□□□□ 0.17
EDEM3-202ENST00000367512 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
EDEM3-202ENST00000367512 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
EDEM3-202ENST00000367512 MRE11P49959 708 aa16.13■□□□□ 0.17
EDEM3-202ENST00000367512 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
EDEM3-202ENST00000367512 SAFBQ15424 915 aaKnown RBP eCLIP16.13■□□□□ 0.17
EDEM3-202ENST00000367512 PAF1Q8N7H5 531 aa16.13■□□□□ 0.17
EDEM3-202ENST00000367512 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
EDEM3-202ENST00000367512 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
EDEM3-202ENST00000367512 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
EDEM3-202ENST00000367512 TRAK2O60296 914 aa16.12■□□□□ 0.17
EDEM3-202ENST00000367512 E9PSI1 815 aa16.12■□□□□ 0.17
EDEM3-202ENST00000367512 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms