RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
SCAF8-202ENST00000367186 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.36
SCAF8-202ENST00000367186 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
SCAF8-202ENST00000367186 ATP6V1DQ9Y5K8 247 aa12.83□□□□□ -0.36
SCAF8-202ENST00000367186 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
SCAF8-202ENST00000367186 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
SCAF8-202ENST00000367186 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
SCAF8-202ENST00000367186 TEFQ10587 303 aa12.82□□□□□ -0.36
SCAF8-202ENST00000367186 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
SCAF8-202ENST00000367186 MPNDQ8N594 471 aa12.82□□□□□ -0.36
SCAF8-202ENST00000367186 CPLX1O14810 134 aa12.81□□□□□ -0.36
SCAF8-202ENST00000367186 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
SCAF8-202ENST00000367186 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
SCAF8-202ENST00000367186 E9PSI1 815 aa12.81□□□□□ -0.36
SCAF8-202ENST00000367186 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
SCAF8-202ENST00000367186 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
SCAF8-202ENST00000367186 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
SCAF8-202ENST00000367186 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
SCAF8-202ENST00000367186 KDM4AO75164 1064 aa12.8□□□□□ -0.36
SCAF8-202ENST00000367186 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
SCAF8-202ENST00000367186 CHMP5Q9NZZ3 219 aa12.8□□□□□ -0.36
SCAF8-202ENST00000367186 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
SCAF8-202ENST00000367186 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
SCAF8-202ENST00000367186 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
SCAF8-202ENST00000367186 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
SCAF8-202ENST00000367186 REC8O95072 547 aa12.79□□□□□ -0.36
SCAF8-202ENST00000367186 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
SCAF8-202ENST00000367186 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
SCAF8-202ENST00000367186 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
SCAF8-202ENST00000367186 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
SCAF8-202ENST00000367186 DZIP1LQ8IYY4 767 aaKnown RBP12.78□□□□□ -0.36
SCAF8-202ENST00000367186 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
SCAF8-202ENST00000367186 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
SCAF8-202ENST00000367186 TPM1P09493 284 aa12.78□□□□□ -0.36
SCAF8-202ENST00000367186 RIPK4P57078 832 aa12.78□□□□□ -0.36
SCAF8-202ENST00000367186 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
SCAF8-202ENST00000367186 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
SCAF8-202ENST00000367186 FMN1Q68DA7 1419 aa12.77□□□□□ -0.36
SCAF8-202ENST00000367186 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
SCAF8-202ENST00000367186 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
SCAF8-202ENST00000367186 KIF15Q9NS87 1388 aa12.77□□□□□ -0.37
SCAF8-202ENST00000367186 HMOX1P09601 288 aa12.77□□□□□ -0.37
SCAF8-202ENST00000367186 ZNF428Q96B54 188 aa12.77□□□□□ -0.37
SCAF8-202ENST00000367186 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
SCAF8-202ENST00000367186 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
SCAF8-202ENST00000367186 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
SCAF8-202ENST00000367186 COG3Q96JB2 828 aa12.76□□□□□ -0.37
SCAF8-202ENST00000367186 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
SCAF8-202ENST00000367186 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
SCAF8-202ENST00000367186 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 MSH5O43196 834 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 DDX19BQ9UMR2 479 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 EID1Q9Y6B2 187 aa12.75□□□□□ -0.37
SCAF8-202ENST00000367186 GPS2Q13227 327 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
SCAF8-202ENST00000367186 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 TRIM29Q14134 588 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
SCAF8-202ENST00000367186 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
SCAF8-202ENST00000367186 CUX1P39880 1505 aa12.73□□□□□ -0.37
SCAF8-202ENST00000367186 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
SCAF8-202ENST00000367186 CCDC27Q2M243 656 aa12.73□□□□□ -0.37
SCAF8-202ENST00000367186 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
SCAF8-202ENST00000367186 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
SCAF8-202ENST00000367186 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
SCAF8-202ENST00000367186 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
SCAF8-202ENST00000367186 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
SCAF8-202ENST00000367186 NFXL1Q6ZNB6 911 aa12.72□□□□□ -0.37
SCAF8-202ENST00000367186 SDF4Q9BRK5 362 aa12.72□□□□□ -0.37
SCAF8-202ENST00000367186 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
SCAF8-202ENST00000367186 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.37
SCAF8-202ENST00000367186 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
SCAF8-202ENST00000367186 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
SCAF8-202ENST00000367186 TRDNQ13061 729 aa12.71□□□□□ -0.37
SCAF8-202ENST00000367186 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
SCAF8-202ENST00000367186 MNS1Q8NEH6 495 aa12.71□□□□□ -0.37
SCAF8-202ENST00000367186 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
SCAF8-202ENST00000367186 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.38
SCAF8-202ENST00000367186 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.38
SCAF8-202ENST00000367186 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.38
SCAF8-202ENST00000367186 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
SCAF8-202ENST00000367186 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCAF8-202ENST00000367186 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 PHLDB1Q86UU1 1377 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 USP47Q96K76 1375 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 PDILTQ8N807 584 aa12.7□□□□□ -0.38
SCAF8-202ENST00000367186 TPM2P07951 284 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 STK11IPQ8N1F8 1099 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 FHOD3Q2V2M9 1422 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 FYB1O15117 783 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms