RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 C8orf34Q49A92 452 aa10.56□□□□□ -0.72
CD46-208ENST00000367042 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
CD46-208ENST00000367042 BCL2L13Q9BXK5 485 aa10.56□□□□□ -0.72
CD46-208ENST00000367042 PANK1Q8TE04 598 aa10.56□□□□□ -0.72
CD46-208ENST00000367042 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
CD46-208ENST00000367042 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CD46-208ENST00000367042 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
CD46-208ENST00000367042 SPINK5Q9NQ38 1064 aaPredicted RBP10.55□□□□□ -0.72
CD46-208ENST00000367042 KDM5DQ9BY66 1539 aa10.55□□□□□ -0.72
CD46-208ENST00000367042 MAST1Q9Y2H9 1570 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 CCDC141Q6ZP82 1450 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 BECN1Q14457 450 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 RSPH4AQ5TD94 716 aa10.54□□□□□ -0.72
CD46-208ENST00000367042 SLFN5Q08AF3 891 aa10.53□□□□□ -0.72
CD46-208ENST00000367042 COL17A1Q9UMD9 1497 aaPredicted RBP10.53□□□□□ -0.72
CD46-208ENST00000367042 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
CD46-208ENST00000367042 A2MP01023 1474 aa10.53□□□□□ -0.72
CD46-208ENST00000367042 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
CD46-208ENST00000367042 BLMP54132 1417 aaPredicted RBP10.52□□□□□ -0.72
CD46-208ENST00000367042 IGHDP01880 384 aa10.52□□□□□ -0.73
CD46-208ENST00000367042 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
CD46-208ENST00000367042 PLEKHH2Q8IVE3 1493 aa10.51□□□□□ -0.73
CD46-208ENST00000367042 E9PSI1 815 aa10.51□□□□□ -0.73
CD46-208ENST00000367042 GZF1Q9H116 711 aaPredicted RBP10.51□□□□□ -0.73
CD46-208ENST00000367042 PLCH2O75038 1416 aa10.51□□□□□ -0.73
CD46-208ENST00000367042 PLXNC1O60486 1568 aa10.5□□□□□ -0.73
CD46-208ENST00000367042 ZMYM4Q5VZL5 1548 aa10.5□□□□□ -0.73
CD46-208ENST00000367042 POGKQ9P215 609 aa10.5□□□□□ -0.73
CD46-208ENST00000367042 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
CD46-208ENST00000367042 SEC24BO95487 1268 aa10.5□□□□□ -0.73
CD46-208ENST00000367042 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
CD46-208ENST00000367042 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
CD46-208ENST00000367042 ABCC1P33527 1531 aa10.48□□□□□ -0.73
CD46-208ENST00000367042 ARAP3Q8WWN8 1544 aa10.48□□□□□ -0.73
CD46-208ENST00000367042 UNC13BO14795 1591 aa10.48□□□□□ -0.73
CD46-208ENST00000367042 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
CD46-208ENST00000367042 MAGI2Q86UL8 1455 aa10.47□□□□□ -0.73
CD46-208ENST00000367042 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
CD46-208ENST00000367042 AFAP1Q8N556 730 aa10.47□□□□□ -0.73
CD46-208ENST00000367042 GPRASP1Q5JY77 1395 aa10.47□□□□□ -0.73
CD46-208ENST00000367042 PLA2R1Q13018 1463 aa10.47□□□□□ -0.73
CD46-208ENST00000367042 WDR7Q9Y4E6 1490 aa10.46□□□□□ -0.73
CD46-208ENST00000367042 TRPM1Q7Z4N2 1603 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 NKTRP30414 1462 aaKnown RBP10.46□□□□□ -0.74
CD46-208ENST00000367042 KIF3BO15066 747 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 EFCAB2Q5VUJ9 269 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 TNNQ9UQP3 1299 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.74
CD46-208ENST00000367042 MAPK8IP3Q9UPT6 1336 aa10.45□□□□□ -0.74
CD46-208ENST00000367042 MFAP1P55081 439 aaKnown RBP10.45□□□□□ -0.74
CD46-208ENST00000367042 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
CD46-208ENST00000367042 E9PCH4 1651 aa10.45□□□□□ -0.74
CD46-208ENST00000367042 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
CD46-208ENST00000367042 EIF3AQ14152 1382 aaKnown RBP10.44□□□□□ -0.74
CD46-208ENST00000367042 SAFB2Q14151 953 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■□□□ 13.1
CD46-208ENST00000367042 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
CD46-208ENST00000367042 TRAPPC8Q9Y2L5 1435 aa10.44□□□□□ -0.74
CD46-208ENST00000367042 U2AF1L5P0DN76 240 aaPredicted RBP10.43□□□□□ -0.74
CD46-208ENST00000367042 U2AF1Q01081 240 aaKnown RBP eCLIP10.43□□□□□ -0.746e-10■■■□□ 18.8
CD46-208ENST00000367042 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 TCP11L2Q8N4U5 519 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 DUOX2Q9NRD8 1548 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 U2SURPO15042 1029 aaKnown RBP10.43□□□□□ -0.74
CD46-208ENST00000367042 PDE3AQ14432 1141 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
CD46-208ENST00000367042 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
CD46-208ENST00000367042 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
CD46-208ENST00000367042 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
CD46-208ENST00000367042 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 SLC12A5Q9H2X9 1139 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 CFAP53Q96M91 514 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
CD46-208ENST00000367042 RLBP1P12271 317 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 ITPRIPQ8IWB1 547 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 ASXL1Q8IXJ9 1541 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
CD46-208ENST00000367042 MTHFSP49914 203 aa10.4□□□□□ -0.74
CD46-208ENST00000367042 L1TD1Q5T7N2 865 aaKnown RBP10.4□□□□□ -0.74
CD46-208ENST00000367042 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.75
CD46-208ENST00000367042 TMEM132EQ6IEE7 984 aa10.4□□□□□ -0.75
CD46-208ENST00000367042 NAP1L5Q96NT1 182 aaPredicted RBP10.4□□□□□ -0.75
CD46-208ENST00000367042 SMC4Q9NTJ3 1288 aa10.4□□□□□ -0.75
CD46-208ENST00000367042 INSRP06213 1382 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 RUNDC1Q96C34 613 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
CD46-208ENST00000367042 ADGRF5Q8IZF2 1346 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 GOLGA6L3A6NEY3 463 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
CD46-208ENST00000367042 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 INO80Q9ULG1 1556 aaPredicted RBP10.39□□□□□ -0.75
CD46-208ENST00000367042 KANK1Q14678 1352 aa10.39□□□□□ -0.75
CD46-208ENST00000367042 EIF2AK4Q9P2K8 1649 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms