RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
CDC42BPA-205ENST00000366769 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
CDC42BPA-205ENST00000366769 TPM1P09493 284 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 SASS6Q6UVJ0 657 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 H3BQV1 296 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 PMFBP1Q8TBY8 1022 aa13.44□□□□□ -0.26
CDC42BPA-205ENST00000366769 IPO8O15397 1037 aaKnown RBP13.43□□□□□ -0.26
CDC42BPA-205ENST00000366769 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
CDC42BPA-205ENST00000366769 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
CDC42BPA-205ENST00000366769 TIGD1Q96MW7 591 aa13.43□□□□□ -0.26
CDC42BPA-205ENST00000366769 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.263e-27■■■■■ 35.2
CDC42BPA-205ENST00000366769 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
CDC42BPA-205ENST00000366769 FOXD1Q16676 465 aa13.42□□□□□ -0.26
CDC42BPA-205ENST00000366769 CENPHQ9H3R5 247 aa13.42□□□□□ -0.26
CDC42BPA-205ENST00000366769 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 C22orf23Q9BZE7 217 aa13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-205ENST00000366769 PLEKHD1A6NEE1 506 aa13.4□□□□□ -0.26
CDC42BPA-205ENST00000366769 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
CDC42BPA-205ENST00000366769 TICAM2Q86XR7 235 aa13.4□□□□□ -0.26
CDC42BPA-205ENST00000366769 BECN2A8MW95 431 aa13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 HMMRO75330 724 aa13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPA-205ENST00000366769 IGSF3O75054 1194 aa13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 BACH2Q9BYV9 841 aa13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-205ENST00000366769 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
CDC42BPA-205ENST00000366769 FAM193AP78312 1265 aa13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 ODF2Q5BJF6 829 aa13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 FOSBP53539 338 aa13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-205ENST00000366769 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.275e-7■■■■□ 23.8
CDC42BPA-205ENST00000366769 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 TMF1P82094 1093 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 TRIM5Q9C035 493 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 RALBP1Q15311 655 aa13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-205ENST00000366769 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPA-205ENST00000366769 AAMPQ13685 434 aa13.34□□□□□ -0.27
CDC42BPA-205ENST00000366769 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
CDC42BPA-205ENST00000366769 FAM177BA6PVY3 158 aa13.33□□□□□ -0.27
CDC42BPA-205ENST00000366769 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPA-205ENST00000366769 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
CDC42BPA-205ENST00000366769 DHX16O60231 1041 aaKnown RBP13.33□□□□□ -0.28
CDC42BPA-205ENST00000366769 CDR1P51861 262 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-205ENST00000366769 DCAF11Q8TEB1 546 aa13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 MCM4P33991 863 aa13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 RRP7AQ9Y3A4 280 aaKnown RBP13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
CDC42BPA-205ENST00000366769 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 SMC2O95347 1197 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPA-205ENST00000366769 SYCE3A1L190 88 aa13.29□□□□□ -0.28
CDC42BPA-205ENST00000366769 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms