RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 PBX2P40425 430 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 PRIM1P49642 420 aaKnown RBP5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 AMHR2Q16671 573 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 CCDC102AQ96A19 550 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 RBM33Q96EV2 1170 aaKnown RBP5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 ADAM33Q9BZ11 813 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 CDHR5Q9HBB8 845 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 ADCY10Q96PN6 1610 aa5.58□□□□□ -1.52
RNU1-140P-201ENST00000365040 IRF6O14896 467 aa5.57□□□□□ -1.52
RNU1-140P-201ENST00000365040 ONECUT3O60422 494 aaPredicted RBP5.57□□□□□ -1.52
RNU1-140P-201ENST00000365040 TSR1Q2NL82 804 aaKnown RBP5.57□□□□□ -1.52
RNU1-140P-201ENST00000365040 NPDC1Q9NQX5 325 aaPredicted RBP5.57□□□□□ -1.52
RNU1-140P-201ENST00000365040 OATP04181 439 aa5.56□□□□□ -1.52
RNU1-140P-201ENST00000365040 TTC13Q8NBP0 860 aa5.56□□□□□ -1.52
RNU1-140P-201ENST00000365040 PRG4Q92954 1404 aaPredicted RBP5.56□□□□□ -1.52
RNU1-140P-201ENST00000365040 TSPOAP1O95153 1857 aa5.56□□□□□ -1.52
RNU1-140P-201ENST00000365040 ERBB3P21860 1342 aa5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 TRIM66O15016 1216 aa5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 EMP3P54852 163 aa5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 BRPF1P55201 1214 aaPredicted RBP5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 PRSS12P56730 875 aa5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 TMEM132AQ24JP5 1023 aa5.55□□□□□ -1.52
RNU1-140P-201ENST00000365040 NBPF26B4DH59 902 aa5.54□□□□□ -1.52
RNU1-140P-201ENST00000365040 ST18O60284 1047 aa5.54□□□□□ -1.52
RNU1-140P-201ENST00000365040 NEUROD2Q15784 382 aa5.54□□□□□ -1.52
RNU1-140P-201ENST00000365040 SLC4A5Q9BY07 1137 aa5.54□□□□□ -1.52
RNU1-140P-201ENST00000365040 GLI2P10070 1586 aa5.54□□□□□ -1.52
RNU1-140P-201ENST00000365040 CLCN1P35523 988 aa5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 PDE4DQ08499 809 aa5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 PADI6Q6TGC4 694 aa5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 RBM46Q8TBY0 533 aaKnown RBP5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 CDCA7LQ96GN5 454 aa5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 KIAA0586Q9BVV6 1533 aa5.53□□□□□ -1.52
RNU1-140P-201ENST00000365040 TEX14Q8IWB6 1497 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 TRIM6-TRIM34B2RNG4 842 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 ARHGAP33O14559 1287 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 FAM69CQ0P6D2 419 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 VARS2Q5ST30 1063 aaKnown RBP5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 ZNF687Q8N1G0 1237 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 DDRGK1Q96HY6 314 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 ADGRG1Q9Y653 693 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 MAP3K4Q9Y6R4 1608 aa5.52□□□□□ -1.53
RNU1-140P-201ENST00000365040 PLB1Q6P1J6 1458 aa5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 FECHP22830 423 aa5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 TTLL12Q14166 644 aaPredicted RBP5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 METTL3Q86U44 580 aaKnown RBP5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 KCNK17Q96T54 332 aa5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 GPCPD1Q9NPB8 672 aa5.51□□□□□ -1.53
RNU1-140P-201ENST00000365040 PPRC1Q5VV67 1664 aaKnown RBP5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 CARMIL2Q6F5E8 1435 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 ABCC2Q92887 1545 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 PXYLP1Q8TE99 480 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 KDM4CQ9H3R0 1056 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 ADGRL1O94910 1474 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 HECW2Q9P2P5 1572 aa5.5□□□□□ -1.53
RNU1-140P-201ENST00000365040 TK2O00142 265 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 COL9A1P20849 921 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 PARP9Q8IXQ6 854 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 ZBED2Q9BTP6 218 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 NBPF3Q9H094 633 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 RABGEF1Q9UJ41 708 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 UHRF1BP1LA0JNW5 1464 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 IQGAP2Q13576 1575 aa5.49□□□□□ -1.53
RNU1-140P-201ENST00000365040 CFAP43Q8NDM7 1665 aa5.48□□□□□ -1.53
RNU1-140P-201ENST00000365040 DNAJB2P25686 324 aa5.48□□□□□ -1.53
RNU1-140P-201ENST00000365040 HS3ST6Q96QI5 342 aa5.48□□□□□ -1.53
RNU1-140P-201ENST00000365040 FAM205CA6NFA0 338 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 GIGYF2Q6Y7W6 1299 aaKnown RBP5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 LAPTM4BQ86VI4 370 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 SULF1Q8IWU6 871 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 NECTIN2Q92692 538 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 TMUB1Q9BVT8 246 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 TSKSQ9UJT2 592 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 KIF27Q86VH2 1401 aa5.47□□□□□ -1.53
RNU1-140P-201ENST00000365040 TNIKQ9UKE5 1360 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 ZCCHC11Q5TAX3 1644 aaKnown RBP5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 DIXDC1Q155Q3 683 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 ERICH6Q7L0X2 663 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 TATDN2Q93075 761 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 MARVELD3Q96A59 401 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 FAM163AQ96GL9 167 aaPredicted RBP5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 GOPCQ9HD26 462 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 PNMA3Q9UL41 463 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 PTPRGP23470 1445 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 ASXL2Q76L83 1435 aa5.46□□□□□ -1.54
RNU1-140P-201ENST00000365040 CTTNBP2Q8WZ74 1663 aa5.45□□□□□ -1.54
RNU1-140P-201ENST00000365040 NUDT18Q6ZVK8 323 aa5.45□□□□□ -1.54
RNU1-140P-201ENST00000365040 EYA1Q99502 592 aa5.45□□□□□ -1.54
RNU1-140P-201ENST00000365040 TMEM134Q9H6X4 195 aa5.45□□□□□ -1.54
RNU1-140P-201ENST00000365040 GPBP1L1Q9HC44 474 aaPredicted RBP5.45□□□□□ -1.54
RNU1-140P-201ENST00000365040 EPRSP07814 1512 aaKnown RBP5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 KDM5BQ9UGL1 1544 aa5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 RCCD1A6NED2 376 aa5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 MDM2Q00987 491 aaPredicted RBP5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 FAM98CQ17RN3 349 aaKnown RBP5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 PROX2Q3B8N5 592 aa5.44□□□□□ -1.54
RNU1-140P-201ENST00000365040 RSPH4AQ5TD94 716 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms