RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 TRIM66O15016 1216 aa4.7□□□□□ -1.66
RNU6-271P-201ENST00000363858 TPRNQ4KMQ1 711 aa4.7□□□□□ -1.66
RNU6-271P-201ENST00000363858 LRCH3Q96II8 777 aa4.7□□□□□ -1.66
RNU6-271P-201ENST00000363858 GOLGA8CPA6NN73 597 aa4.69□□□□□ -1.66
RNU6-271P-201ENST00000363858 PTPN5P54829 565 aa4.69□□□□□ -1.66
RNU6-271P-201ENST00000363858 AMHR2Q16671 573 aa4.69□□□□□ -1.66
RNU6-271P-201ENST00000363858 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.69□□□□□ -1.66
RNU6-271P-201ENST00000363858 HPS5Q9UPZ3 1129 aa4.69□□□□□ -1.66
RNU6-271P-201ENST00000363858 APLP1P51693 650 aa4.68□□□□□ -1.66
RNU6-271P-201ENST00000363858 MDM2Q00987 491 aaPredicted RBP4.68□□□□□ -1.66
RNU6-271P-201ENST00000363858 PARP9Q8IXQ6 854 aa4.68□□□□□ -1.66
RNU6-271P-201ENST00000363858 STAC3Q96MF2 364 aa4.68□□□□□ -1.66
RNU6-271P-201ENST00000363858 TSR3Q9UJK0 312 aaKnown RBP4.68□□□□□ -1.66
RNU6-271P-201ENST00000363858 KRI1Q8N9T8 703 aaKnown RBP4.67□□□□□ -1.66
RNU6-271P-201ENST00000363858 AK7Q96M32 723 aa4.67□□□□□ -1.66
RNU6-271P-201ENST00000363858 DAXXQ9UER7 740 aaPredicted RBP4.67□□□□□ -1.66
RNU6-271P-201ENST00000363858 FAM217BQ9NTX9 383 aaPredicted RBP4.66□□□□□ -1.66
RNU6-271P-201ENST00000363858 HCSTQ9UBK5 93 aa4.66□□□□□ -1.66
RNU6-271P-201ENST00000363858 RNF40O75150 1001 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 MS4A1P11836 297 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 CD46P15529 392 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 PDE4DQ08499 809 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 SLF2Q8IX21 1173 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 GPCPD1Q9NPB8 672 aa4.65□□□□□ -1.67
RNU6-271P-201ENST00000363858 DDX11L8A8MPP1 907 aa4.64□□□□□ -1.67
RNU6-271P-201ENST00000363858 CFHP08603 1231 aa4.64□□□□□ -1.67
RNU6-271P-201ENST00000363858 PPP4CP60510 307 aa4.64□□□□□ -1.67
RNU6-271P-201ENST00000363858 GIGYF2Q6Y7W6 1299 aaKnown RBP4.64□□□□□ -1.67
RNU6-271P-201ENST00000363858 GPBP1L1Q9HC44 474 aaPredicted RBP4.64□□□□□ -1.67
RNU6-271P-201ENST00000363858 CLCN1P35523 988 aa4.63□□□□□ -1.67
RNU6-271P-201ENST00000363858 TJAP1Q5JTD0 557 aa4.63□□□□□ -1.67
RNU6-271P-201ENST00000363858 ACTN4O43707 911 aaKnown RBP4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 ITGBL1O95965 494 aaPredicted RBP4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 GCGRP47871 477 aa4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 TTLL12Q14166 644 aaPredicted RBP4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 HLA-CQ95604 372 aa4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 MTRQ99707 1265 aa4.62□□□□□ -1.67
RNU6-271P-201ENST00000363858 SSTR3P32745 418 aaPredicted RBP4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 BRPF1P55201 1214 aaPredicted RBP4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 FUT2Q10981 343 aa4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 BLOC1S3Q6QNY0 202 aa4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 RDH13Q8NBN7 331 aa4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 ZNF516Q92618 1163 aa4.61□□□□□ -1.67
RNU6-271P-201ENST00000363858 TLL1O43897 1013 aa4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 HDGFP51858 240 aaKnown RBP4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 PUS10Q3MIT2 529 aaKnown RBP4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 MORN1Q5T089 497 aa4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 NYAP1Q6ZVC0 841 aa4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 NKX2-3Q8TAU0 364 aa4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 KDM4CQ9H3R0 1056 aa4.6□□□□□ -1.67
RNU6-271P-201ENST00000363858 PLEKHG3A1L390 1219 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 COPS2P61201 443 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 GUCA2AQ02747 115 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 SULF1Q8IWU6 871 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 SPIRE2Q8WWL2 714 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 PLA2G2EQ9NZK7 142 aa4.59□□□□□ -1.67
RNU6-271P-201ENST00000363858 HOXA2O43364 376 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 KMT5BQ4FZB7 885 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 FBXO31Q5XUX0 539 aaPredicted RBP4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 THAP11Q96EK4 314 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 BEGAINQ9BUH8 593 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 FAM117AQ9C073 453 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 PCDHB3Q9Y5E6 796 aa4.58□□□□□ -1.68
RNU6-271P-201ENST00000363858 KDM4AO75164 1064 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 IFFO2Q5TF58 517 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 RNF19BQ6ZMZ0 732 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 IL21Q9HBE4 155 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 PCDHGC3Q9UN70 934 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 SLC27A5Q9Y2P5 690 aa4.57□□□□□ -1.68
RNU6-271P-201ENST00000363858 MOXD2PA6NHM9 499 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 ZPR1O75312 459 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 NDUFV2P19404 249 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 SCUBE3Q8IX30 993 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 NECTIN2Q92692 538 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 TBC1D2Q9BYX2 928 aa4.56□□□□□ -1.68
RNU6-271P-201ENST00000363858 A0A0G2JS52 829 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 ATP6V1AP38606 617 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 SLC4A3P48751 1232 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 MYSM1Q5VVJ2 828 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 FAM160A2Q8N612 972 aaPredicted RBP4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 EMID1Q96A84 441 aaPredicted RBP4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 PRR14Q9BWN1 585 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 LIMD1Q9UGP4 676 aa4.55□□□□□ -1.68
RNU6-271P-201ENST00000363858 KCNC4Q03721 635 aa4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 NEUROD2Q15784 382 aa4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 RSBN1LQ6PCB5 846 aaPredicted RBP4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 BRICD5Q6PL45 260 aa4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 SYMPKQ92797 1274 aaKnown RBP4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 PRDM9Q9NQV7 894 aa4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 PCDHB15Q9Y5E8 787 aa4.54□□□□□ -1.68
RNU6-271P-201ENST00000363858 SPTLC1O15269 473 aa4.53□□□□□ -1.68
RNU6-271P-201ENST00000363858 USP46P62068 366 aa4.53□□□□□ -1.68
RNU6-271P-201ENST00000363858 RSPH4AQ5TD94 716 aa4.53□□□□□ -1.68
RNU6-271P-201ENST00000363858 NR1I2O75469 434 aa4.52□□□□□ -1.69
RNU6-271P-201ENST00000363858 S1PR4O95977 384 aa4.52□□□□□ -1.69
RNU6-271P-201ENST00000363858 ADH1BP00325 375 aa4.52□□□□□ -1.69
RNU6-271P-201ENST00000363858 PPEF1O14829 653 aaPredicted RBP4.51□□□□□ -1.69
RNU6-271P-201ENST00000363858 FDX1P10109 184 aa4.51□□□□□ -1.69
RNU6-271P-201ENST00000363858 QPCTQ16769 361 aa4.51□□□□□ -1.69
RNU6-271P-201ENST00000363858 PLA2G2CQ5R387 149 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms