RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 NEURL4Q96JN8 1562 aa25.41■■□□□ 1.66
CMTM3-201ENST00000361909 DCAF11Q8TEB1 546 aa25.39■■□□□ 1.66
CMTM3-201ENST00000361909 TCERG1O14776 1098 aaKnown RBP25.38■■□□□ 1.65
CMTM3-201ENST00000361909 CLTCL1P53675 1640 aa25.38■■□□□ 1.65
CMTM3-201ENST00000361909 ARHGEF40Q8TER5 1519 aa25.38■■□□□ 1.65
CMTM3-201ENST00000361909 PPP6R1Q9UPN7 881 aa25.38■■□□□ 1.65
CMTM3-201ENST00000361909 CAMSAP1Q5T5Y3 1602 aa25.37■■□□□ 1.65
CMTM3-201ENST00000361909 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
CMTM3-201ENST00000361909 NPATQ14207 1427 aa25.36■■□□□ 1.65
CMTM3-201ENST00000361909 ARHGAP31Q2M1Z3 1444 aa25.36■■□□□ 1.65
CMTM3-201ENST00000361909 ROCK2O75116 1388 aaKnown RBP25.36■■□□□ 1.65
CMTM3-201ENST00000361909 RALGAPBQ86X10 1494 aa25.35■■□□□ 1.65
CMTM3-201ENST00000361909 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
CMTM3-201ENST00000361909 KTN1Q86UP2 1357 aaKnown RBP25.33■■□□□ 1.65
CMTM3-201ENST00000361909 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.65
CMTM3-201ENST00000361909 MS4A1P11836 297 aa25.33■■□□□ 1.65
CMTM3-201ENST00000361909 KDM2AQ9Y2K7 1162 aa25.32■■□□□ 1.64
CMTM3-201ENST00000361909 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
CMTM3-201ENST00000361909 ANO8Q9HCE9 1232 aaPredicted RBP25.3■■□□□ 1.64
CMTM3-201ENST00000361909 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
CMTM3-201ENST00000361909 KIF1BO60333 1816 aa25.29■■□□□ 1.64
CMTM3-201ENST00000361909 NOS1P29475 1434 aa25.28■■□□□ 1.64
CMTM3-201ENST00000361909 LRPPRCP42704 1394 aaKnown RBP25.28■■□□□ 1.64
CMTM3-201ENST00000361909 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
CMTM3-201ENST00000361909 TRPM1Q7Z4N2 1603 aa25.26■■□□□ 1.63
CMTM3-201ENST00000361909 PNISRQ8TF01 805 aaKnown RBP25.25■■□□□ 1.63
CMTM3-201ENST00000361909 SIGLEC1Q9BZZ2 1709 aa25.24■■□□□ 1.63
CMTM3-201ENST00000361909 UGGT1Q9NYU2 1555 aa25.23■■□□□ 1.63
CMTM3-201ENST00000361909 BRD4O60885 1362 aaPredicted RBP25.23■■□□□ 1.63
CMTM3-201ENST00000361909 CFAP65Q6ZU64 1925 aaKnown RBP25.23■■□□□ 1.63
CMTM3-201ENST00000361909 RRP1P56182 461 aaKnown RBP25.22■■□□□ 1.63
CMTM3-201ENST00000361909 USP47Q96K76 1375 aa25.22■■□□□ 1.63
CMTM3-201ENST00000361909 NEFMP07197 916 aa25.21■■□□□ 1.63
CMTM3-201ENST00000361909 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
CMTM3-201ENST00000361909 PIK3C2BO00750 1634 aa25.21■■□□□ 1.63
CMTM3-201ENST00000361909 DDRGK1Q96HY6 314 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 GPRASP1Q5JY77 1395 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 ADGRB3O60242 1522 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 LAMC1P11047 1609 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 IL27Q8NEV9 243 aa25.2■■□□□ 1.62
CMTM3-201ENST00000361909 PDE4AP27815 886 aa25.19■■□□□ 1.62
CMTM3-201ENST00000361909 BACH2Q9BYV9 841 aa25.19■■□□□ 1.62
CMTM3-201ENST00000361909 SYNMO15061 1565 aa25.17■■□□□ 1.62
CMTM3-201ENST00000361909 MADDQ8WXG6 1647 aa25.17■■□□□ 1.62
CMTM3-201ENST00000361909 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
CMTM3-201ENST00000361909 MYOM2P54296 1465 aa25.16■■□□□ 1.62
CMTM3-201ENST00000361909 PDE3BQ13370 1112 aa25.16■■□□□ 1.62
CMTM3-201ENST00000361909 TMC1Q8TDI8 760 aa25.16■■□□□ 1.62
CMTM3-201ENST00000361909 SLC52A1Q9NWF4 448 aa25.16■■□□□ 1.62
CMTM3-201ENST00000361909 IFT172Q9UG01 1749 aa25.15■■□□□ 1.62
CMTM3-201ENST00000361909 MROH2AA6NES4 1674 aa25.15■■□□□ 1.62
CMTM3-201ENST00000361909 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.61
CMTM3-201ENST00000361909 RPGRIP1LQ68CZ1 1315 aa25.13■■□□□ 1.61
CMTM3-201ENST00000361909 INSRP06213 1382 aa25.12■■□□□ 1.61
CMTM3-201ENST00000361909 RALBP1Q15311 655 aa25.11■■□□□ 1.61
CMTM3-201ENST00000361909 MYBBP1AQ9BQG0 1328 aaKnown RBP25.11■■□□□ 1.61
CMTM3-201ENST00000361909 KIAA1210Q9ULL0 1709 aa25.11■■□□□ 1.61
CMTM3-201ENST00000361909 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
CMTM3-201ENST00000361909 NBPF1Q3BBV0 1214 aa25.09■■□□□ 1.61
CMTM3-201ENST00000361909 NPM2Q86SE8 214 aaKnown RBP25.09■■□□□ 1.61
CMTM3-201ENST00000361909 RCAN3Q9UKA8 241 aa25.09■■□□□ 1.61
CMTM3-201ENST00000361909 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
CMTM3-201ENST00000361909 PPLO60437 1756 aa25.07■■□□□ 1.6
CMTM3-201ENST00000361909 IDI1Q13907 227 aa25.07■■□□□ 1.6
CMTM3-201ENST00000361909 MLECQ14165 292 aa25.06■■□□□ 1.6
CMTM3-201ENST00000361909 EXOC6Q8TAG9 804 aa25.06■■□□□ 1.6
CMTM3-201ENST00000361909 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
CMTM3-201ENST00000361909 SPATA31D1Q6ZQQ2 1576 aa25.06■■□□□ 1.6
CMTM3-201ENST00000361909 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
CMTM3-201ENST00000361909 CHGAP10645 457 aaKnown RBP25.05■■□□□ 1.6
CMTM3-201ENST00000361909 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
CMTM3-201ENST00000361909 GSE1Q14687 1217 aa25.03■■□□□ 1.6
CMTM3-201ENST00000361909 FBXO31Q5XUX0 539 aaPredicted RBP25.02■■□□□ 1.6
CMTM3-201ENST00000361909 ZMYM3Q14202 1370 aa25.02■■□□□ 1.6
CMTM3-201ENST00000361909 TMEM131LA2VDJ0 1609 aa25.01■■□□□ 1.59
CMTM3-201ENST00000361909 ADGRF5Q8IZF2 1346 aa25.01■■□□□ 1.59
CMTM3-201ENST00000361909 ZFYVE9O95405 1425 aa24.98■■□□□ 1.59
CMTM3-201ENST00000361909 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
CMTM3-201ENST00000361909 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
CMTM3-201ENST00000361909 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
CMTM3-201ENST00000361909 PIK3C2GO75747 1445 aa24.97■■□□□ 1.59
CMTM3-201ENST00000361909 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
CMTM3-201ENST00000361909 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
CMTM3-201ENST00000361909 UBE2Q2Q8WVN8 375 aa24.95■■□□□ 1.59
CMTM3-201ENST00000361909 NLRP13Q86W25 1043 aa24.94■■□□□ 1.58
CMTM3-201ENST00000361909 SETBP1Q9Y6X0 1596 aa24.94■■□□□ 1.58
CMTM3-201ENST00000361909 PARD3Q8TEW0 1356 aa24.93■■□□□ 1.58
CMTM3-201ENST00000361909 MYO5BQ9ULV0 1848 aa24.93■■□□□ 1.58
CMTM3-201ENST00000361909 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
CMTM3-201ENST00000361909 C14orf93Q9H972 538 aaKnown RBP24.92■■□□□ 1.58
CMTM3-201ENST00000361909 POLR3GLQ9BT43 218 aa24.91■■□□□ 1.58
CMTM3-201ENST00000361909 BLMP54132 1417 aaPredicted RBP24.9■■□□□ 1.58
CMTM3-201ENST00000361909 TESK2Q96S53 571 aa24.9■■□□□ 1.58
CMTM3-201ENST00000361909 EIF3AQ14152 1382 aaKnown RBP24.9■■□□□ 1.58
CMTM3-201ENST00000361909 NFKBIBQ15653 356 aa24.89■■□□□ 1.58
CMTM3-201ENST00000361909 SLC24A1O60721 1099 aa24.86■■□□□ 1.57
CMTM3-201ENST00000361909 STAG3Q9UJ98 1225 aa24.86■■□□□ 1.57
CMTM3-201ENST00000361909 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
CMTM3-201ENST00000361909 DAXXQ9UER7 740 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms