RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 PRM3Q9NNZ6 103 aa14.99□□□□□ -0.01
CCDC144A-204ENST00000360524 ZKSCAN2Q63HK3 967 aa14.99□□□□□ -0.01
CCDC144A-204ENST00000360524 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
CCDC144A-204ENST00000360524 TEFQ10587 303 aa14.99□□□□□ -0.01
CCDC144A-204ENST00000360524 TPM3P06753 285 aa14.98□□□□□ -0.01
CCDC144A-204ENST00000360524 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
CCDC144A-204ENST00000360524 ZNF592Q92610 1267 aa14.98□□□□□ -0.01
CCDC144A-204ENST00000360524 SKOR2Q2VWA4 1001 aaPredicted RBP14.98□□□□□ -0.01
CCDC144A-204ENST00000360524 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
CCDC144A-204ENST00000360524 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 KIF3AQ9Y496 699 aa14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 TPD52L1Q16890 204 aaPredicted RBP14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 TTC5Q8N0Z6 440 aa14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 MCTP1Q6DN14 999 aa14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
CCDC144A-204ENST00000360524 MARCH6O60337 910 aa14.96□□□□□ -0.01
CCDC144A-204ENST00000360524 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.02
CCDC144A-204ENST00000360524 NGEFQ8N5V2 710 aa14.96□□□□□ -0.02
CCDC144A-204ENST00000360524 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.02
CCDC144A-204ENST00000360524 CUX1P39880 1505 aa14.95□□□□□ -0.02
CCDC144A-204ENST00000360524 GOLGA6L19H0YKK7 550 aa14.95□□□□□ -0.02
CCDC144A-204ENST00000360524 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
CCDC144A-204ENST00000360524 IGF1RP08069 1367 aa14.94□□□□□ -0.02
CCDC144A-204ENST00000360524 NEXNQ0ZGT2 675 aa14.94□□□□□ -0.02
CCDC144A-204ENST00000360524 FBXW7Q969H0 707 aa14.93□□□□□ -0.02
CCDC144A-204ENST00000360524 APAF1O14727 1248 aa14.93□□□□□ -0.02
CCDC144A-204ENST00000360524 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
CCDC144A-204ENST00000360524 EIF2S2P20042 333 aaKnown RBP14.93□□□□□ -0.02
CCDC144A-204ENST00000360524 PSME1Q06323 249 aa14.93□□□□□ -0.02
CCDC144A-204ENST00000360524 BECN2A8MW95 431 aa14.92□□□□□ -0.02
CCDC144A-204ENST00000360524 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
CCDC144A-204ENST00000360524 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
CCDC144A-204ENST00000360524 ANO2Q9NQ90 1003 aa14.92□□□□□ -0.02
CCDC144A-204ENST00000360524 FAM69CQ0P6D2 419 aa14.92□□□□□ -0.02
CCDC144A-204ENST00000360524 GPS2Q13227 327 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 FOSBP53539 338 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 DIAPH3Q9NSV4 1193 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 C9orf78Q9NZ63 289 aaPredicted RBP14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
CCDC144A-204ENST00000360524 RIPK4P57078 832 aa14.9□□□□□ -0.02
CCDC144A-204ENST00000360524 APPP05067 770 aa14.9□□□□□ -0.02
CCDC144A-204ENST00000360524 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 CEP89Q96ST8 783 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 MAP7D2Q96T17 732 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 WWC1Q8IX03 1113 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 STAC3Q96MF2 364 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
CCDC144A-204ENST00000360524 API5Q9BZZ5 524 aaKnown RBP14.88□□□□□ -0.03
CCDC144A-204ENST00000360524 MSH5O43196 834 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 DDX58O95786 925 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 TSR1Q2NL82 804 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 RAD21O60216 631 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 AKAP17AQ02040 695 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 NFKBIBQ15653 356 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 ATP6V1DQ9Y5K8 247 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 RUNDC1Q96C34 613 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 ROCK1Q13464 1354 aa14.87□□□□□ -0.03
CCDC144A-204ENST00000360524 SYNE3Q6ZMZ3 975 aa14.86□□□□□ -0.03
CCDC144A-204ENST00000360524 PCMTD1Q96MG8 357 aaPredicted RBP14.86□□□□□ -0.03
CCDC144A-204ENST00000360524 NOL10Q9BSC4 688 aaKnown RBP14.86□□□□□ -0.03
CCDC144A-204ENST00000360524 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 DZIP1LQ8IYY4 767 aaKnown RBP14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 IFIT2P09913 472 aaKnown RBP14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 MIA2Q96PC5 1412 aa14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 TPM2P07951 284 aa14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
CCDC144A-204ENST00000360524 SYTL4Q96C24 671 aaPredicted RBP14.84□□□□□ -0.03
CCDC144A-204ENST00000360524 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
CCDC144A-204ENST00000360524 BICD2Q8TD16 824 aa14.84□□□□□ -0.03
CCDC144A-204ENST00000360524 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
CCDC144A-204ENST00000360524 MEX3CQ5U5Q3 659 aaKnown RBP14.83□□□□□ -0.03
CCDC144A-204ENST00000360524 FKBP5Q13451 457 aaPredicted RBP14.83□□□□□ -0.04
CCDC144A-204ENST00000360524 FYCO1Q9BQS8 1478 aa14.83□□□□□ -0.04
CCDC144A-204ENST00000360524 GNAI1P63096 354 aa14.83□□□□□ -0.04
CCDC144A-204ENST00000360524 REC8O95072 547 aa14.83□□□□□ -0.04
CCDC144A-204ENST00000360524 TPM1P09493 284 aa14.83□□□□□ -0.04
CCDC144A-204ENST00000360524 VPS37CA5D8V6 355 aaPredicted RBP14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 ATF3P18847 181 aa14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 ARHGAP5Q13017 1502 aa14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 CHMP5Q9NZZ3 219 aa14.82□□□□□ -0.04
CCDC144A-204ENST00000360524 G3BP1Q13283 466 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC144A-204ENST00000360524 LNPKQ9C0E8 428 aa14.81□□□□□ -0.04
CCDC144A-204ENST00000360524 TRIM29Q14134 588 aa14.81□□□□□ -0.04
CCDC144A-204ENST00000360524 HOMER1Q86YM7 354 aa14.81□□□□□ -0.04
CCDC144A-204ENST00000360524 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
CCDC144A-204ENST00000360524 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms