RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
SIN3A-201ENST00000360439 DAPK1P53355 1430 aa12.65□□□□□ -0.38
SIN3A-201ENST00000360439 ATF3P18847 181 aa12.65□□□□□ -0.38
SIN3A-201ENST00000360439 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
SIN3A-201ENST00000360439 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
SIN3A-201ENST00000360439 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
SIN3A-201ENST00000360439 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.39
SIN3A-201ENST00000360439 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
SIN3A-201ENST00000360439 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
SIN3A-201ENST00000360439 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-201ENST00000360439 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
SIN3A-201ENST00000360439 KIF14Q15058 1648 aa12.63□□□□□ -0.39
SIN3A-201ENST00000360439 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
SIN3A-201ENST00000360439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.39
SIN3A-201ENST00000360439 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
SIN3A-201ENST00000360439 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
SIN3A-201ENST00000360439 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
SIN3A-201ENST00000360439 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
SIN3A-201ENST00000360439 WDR7Q9Y4E6 1490 aa12.62□□□□□ -0.39
SIN3A-201ENST00000360439 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
SIN3A-201ENST00000360439 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
SIN3A-201ENST00000360439 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
SIN3A-201ENST00000360439 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
SIN3A-201ENST00000360439 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
SIN3A-201ENST00000360439 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
SIN3A-201ENST00000360439 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
SIN3A-201ENST00000360439 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-201ENST00000360439 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
SIN3A-201ENST00000360439 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
SIN3A-201ENST00000360439 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-201ENST00000360439 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
SIN3A-201ENST00000360439 RPRD2Q5VT52 1461 aaKnown RBP12.58□□□□□ -0.39
SIN3A-201ENST00000360439 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.39
SIN3A-201ENST00000360439 GCC2Q8IWJ2 1684 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 ABCC2Q92887 1545 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 PSME1Q06323 249 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
SIN3A-201ENST00000360439 ABCA5Q8WWZ7 1642 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 RAPGEF6Q8TEU7 1601 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 KIAA0556O60303 1618 aa12.58□□□□□ -0.4
SIN3A-201ENST00000360439 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-201ENST00000360439 MEX3CQ5U5Q3 659 aaKnown RBP12.57□□□□□ -0.4
SIN3A-201ENST00000360439 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
SIN3A-201ENST00000360439 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
SIN3A-201ENST00000360439 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-201ENST00000360439 CAMSAP2Q08AD1 1489 aa12.56□□□□□ -0.4
SIN3A-201ENST00000360439 BECN1Q14457 450 aa12.56□□□□□ -0.4
SIN3A-201ENST00000360439 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
SIN3A-201ENST00000360439 MS4A1P11836 297 aa12.56□□□□□ -0.4
SIN3A-201ENST00000360439 PLCH2O75038 1416 aa12.55□□□□□ -0.4
SIN3A-201ENST00000360439 PIP4K2BP78356 416 aa12.55□□□□□ -0.4
SIN3A-201ENST00000360439 CFAP70Q5T0N1 1121 aa12.55□□□□□ -0.4
SIN3A-201ENST00000360439 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
SIN3A-201ENST00000360439 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
SIN3A-201ENST00000360439 IPO4Q8TEX9 1081 aaKnown RBP12.55□□□□□ -0.4
SIN3A-201ENST00000360439 AMPHP49418 695 aa12.54□□□□□ -0.4
SIN3A-201ENST00000360439 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
SIN3A-201ENST00000360439 DISP1Q96F81 1524 aa12.53□□□□□ -0.4
SIN3A-201ENST00000360439 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
SIN3A-201ENST00000360439 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
SIN3A-201ENST00000360439 NPHP1O15259 732 aa12.52□□□□□ -0.4
SIN3A-201ENST00000360439 EVA1CP58658 441 aa12.52□□□□□ -0.4
SIN3A-201ENST00000360439 ZNF771Q7L3S4 317 aaPredicted RBP12.52□□□□□ -0.4
SIN3A-201ENST00000360439 ABCC5O15440 1437 aa12.52□□□□□ -0.41
SIN3A-201ENST00000360439 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
SIN3A-201ENST00000360439 GPATCH8Q9UKJ3 1502 aaKnown RBP12.51□□□□□ -0.41
SIN3A-201ENST00000360439 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
SIN3A-201ENST00000360439 FAM193AP78312 1265 aa12.5□□□□□ -0.41
SIN3A-201ENST00000360439 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
SIN3A-201ENST00000360439 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
SIN3A-201ENST00000360439 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-201ENST00000360439 IDI1Q13907 227 aa12.49□□□□□ -0.41
SIN3A-201ENST00000360439 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
SIN3A-201ENST00000360439 NBPF8Q3BBV2 869 aa12.48□□□□□ -0.41
SIN3A-201ENST00000360439 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
SIN3A-201ENST00000360439 HSPA2P54652 639 aa12.48□□□□□ -0.41
SIN3A-201ENST00000360439 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
SIN3A-201ENST00000360439 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
SIN3A-201ENST00000360439 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
SIN3A-201ENST00000360439 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
SIN3A-201ENST00000360439 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
SIN3A-201ENST00000360439 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
SIN3A-201ENST00000360439 COG3Q96JB2 828 aa12.47□□□□□ -0.41
SIN3A-201ENST00000360439 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
SIN3A-201ENST00000360439 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
SIN3A-201ENST00000360439 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
SIN3A-201ENST00000360439 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.41
SIN3A-201ENST00000360439 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
SIN3A-201ENST00000360439 CHD1O14646 1710 aa12.46□□□□□ -0.42
SIN3A-201ENST00000360439 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.42
SIN3A-201ENST00000360439 NGEFQ8N5V2 710 aa12.46□□□□□ -0.42
SIN3A-201ENST00000360439 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.42
SIN3A-201ENST00000360439 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms