RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 STK31Q9BXU1 1019 aa14.02□□□□□ -0.16
TMC3-201ENST00000359440 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.17
TMC3-201ENST00000359440 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
TMC3-201ENST00000359440 C22orf23Q9BZE7 217 aa14.01□□□□□ -0.17
TMC3-201ENST00000359440 STK26Q9P289 416 aa14.01□□□□□ -0.17
TMC3-201ENST00000359440 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
TMC3-201ENST00000359440 TRAK1Q9UPV9 953 aa14.01□□□□□ -0.17
TMC3-201ENST00000359440 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
TMC3-201ENST00000359440 NUCB2P80303 420 aa14□□□□□ -0.17
TMC3-201ENST00000359440 REC8O95072 547 aa14□□□□□ -0.17
TMC3-201ENST00000359440 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
TMC3-201ENST00000359440 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
TMC3-201ENST00000359440 ANKRD45Q5TZF3 282 aa13.99□□□□□ -0.17
TMC3-201ENST00000359440 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
TMC3-201ENST00000359440 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
TMC3-201ENST00000359440 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
TMC3-201ENST00000359440 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
TMC3-201ENST00000359440 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
TMC3-201ENST00000359440 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.97□□□□□ -0.17
TMC3-201ENST00000359440 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
TMC3-201ENST00000359440 APBB1O00213 710 aa13.95□□□□□ -0.18
TMC3-201ENST00000359440 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
TMC3-201ENST00000359440 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
TMC3-201ENST00000359440 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
TMC3-201ENST00000359440 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
TMC3-201ENST00000359440 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
TMC3-201ENST00000359440 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
TMC3-201ENST00000359440 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
TMC3-201ENST00000359440 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
TMC3-201ENST00000359440 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
TMC3-201ENST00000359440 ABCC5O15440 1437 aa13.93□□□□□ -0.18
TMC3-201ENST00000359440 CDK11BP21127 795 aaKnown RBP13.93□□□□□ -0.18
TMC3-201ENST00000359440 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
TMC3-201ENST00000359440 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
TMC3-201ENST00000359440 TRAK2O60296 914 aa13.92□□□□□ -0.18
TMC3-201ENST00000359440 GNAI1P63096 354 aa13.92□□□□□ -0.18
TMC3-201ENST00000359440 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
TMC3-201ENST00000359440 MTERF4Q7Z6M4 381 aaKnown RBP13.92□□□□□ -0.18
TMC3-201ENST00000359440 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
TMC3-201ENST00000359440 TCP11L2Q8N4U5 519 aa13.92□□□□□ -0.18
TMC3-201ENST00000359440 PRG4Q92954 1404 aaPredicted RBP13.91□□□□□ -0.18
TMC3-201ENST00000359440 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
TMC3-201ENST00000359440 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
TMC3-201ENST00000359440 RIPK4P57078 832 aa13.91□□□□□ -0.18
TMC3-201ENST00000359440 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
TMC3-201ENST00000359440 CHMP4CQ96CF2 233 aa13.91□□□□□ -0.18
TMC3-201ENST00000359440 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
TMC3-201ENST00000359440 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 SLFN5Q08AF3 891 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 CDC45O75419 566 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 CFAP43Q8NDM7 1665 aa13.9□□□□□ -0.18
TMC3-201ENST00000359440 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.19
TMC3-201ENST00000359440 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
TMC3-201ENST00000359440 TPM2P07951 284 aa13.89□□□□□ -0.19
TMC3-201ENST00000359440 TPM4P67936 248 aa13.89□□□□□ -0.19
TMC3-201ENST00000359440 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
TMC3-201ENST00000359440 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
TMC3-201ENST00000359440 CAMSAP2Q08AD1 1489 aa13.88□□□□□ -0.19
TMC3-201ENST00000359440 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
TMC3-201ENST00000359440 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
TMC3-201ENST00000359440 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
TMC3-201ENST00000359440 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
TMC3-201ENST00000359440 COG3Q96JB2 828 aa13.87□□□□□ -0.19
TMC3-201ENST00000359440 LNPKQ9C0E8 428 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 MBD3O95983 291 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 SLC4A10Q6U841 1118 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
TMC3-201ENST00000359440 MCM2P49736 904 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 MTHFSP49914 203 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 CCDC173Q0VFZ6 552 aa13.86□□□□□ -0.19
TMC3-201ENST00000359440 RABEP1Q15276 862 aa13.85□□□□□ -0.19
TMC3-201ENST00000359440 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
TMC3-201ENST00000359440 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
TMC3-201ENST00000359440 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
TMC3-201ENST00000359440 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
TMC3-201ENST00000359440 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
TMC3-201ENST00000359440 BCAR3O75815 825 aa13.84□□□□□ -0.19
TMC3-201ENST00000359440 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
TMC3-201ENST00000359440 NESP48681 1621 aa13.84□□□□□ -0.19
TMC3-201ENST00000359440 MCM4P33991 863 aa13.84□□□□□ -0.19
TMC3-201ENST00000359440 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
TMC3-201ENST00000359440 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
TMC3-201ENST00000359440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.2
TMC3-201ENST00000359440 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
TMC3-201ENST00000359440 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
TMC3-201ENST00000359440 CCDC34Q96HJ3 373 aa13.82□□□□□ -0.2
TMC3-201ENST00000359440 LRPPRCP42704 1394 aaKnown RBP13.82□□□□□ -0.2
TMC3-201ENST00000359440 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
TMC3-201ENST00000359440 TPM3P06753 285 aa13.81□□□□□ -0.2
TMC3-201ENST00000359440 SOX12O15370 315 aa13.81□□□□□ -0.2
TMC3-201ENST00000359440 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
TMC3-201ENST00000359440 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
TMC3-201ENST00000359440 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
TMC3-201ENST00000359440 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
TMC3-201ENST00000359440 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
TMC3-201ENST00000359440 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
TMC3-201ENST00000359440 MCTP1Q6DN14 999 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms