RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 NFKBIBQ15653 356 aa31.4■■■□□ 2.62
DDX42-201ENST00000359353 USP35Q9P2H5 1018 aa31.4■■■□□ 2.62
DDX42-201ENST00000359353 DAXXQ9UER7 740 aaPredicted RBP31.4■■■□□ 2.62
DDX42-201ENST00000359353 SLFN5Q08AF3 891 aa31.4■■■□□ 2.62
DDX42-201ENST00000359353 RNF17Q9BXT8 1623 aaKnown RBP31.39■■■□□ 2.62
DDX42-201ENST00000359353 DUOX2Q9NRD8 1548 aa31.39■■■□□ 2.62
DDX42-201ENST00000359353 ERCC6L2Q5T890 1561 aa31.38■■■□□ 2.61
DDX42-201ENST00000359353 AFAP1Q8N556 730 aa31.38■■■□□ 2.61
DDX42-201ENST00000359353 PLXNC1O60486 1568 aa31.38■■■□□ 2.61
DDX42-201ENST00000359353 FAM161AQ3B820 660 aa31.38■■■□□ 2.61
DDX42-201ENST00000359353 ANO8Q9HCE9 1232 aaPredicted RBP31.36■■■□□ 2.61
DDX42-201ENST00000359353 TRAPPC8Q9Y2L5 1435 aa31.36■■■□□ 2.61
DDX42-201ENST00000359353 CHD1O14646 1710 aa31.35■■■□□ 2.61
DDX42-201ENST00000359353 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
DDX42-201ENST00000359353 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.34■■■□□ 2.61
DDX42-201ENST00000359353 ATP10AO60312 1499 aa31.34■■■□□ 2.61
DDX42-201ENST00000359353 BRPF3Q9ULD4 1205 aa31.31■■■□□ 2.6
DDX42-201ENST00000359353 ASXL1Q8IXJ9 1541 aa31.31■■■□□ 2.6
DDX42-201ENST00000359353 IQGAP1P46940 1657 aa31.31■■■□□ 2.6
DDX42-201ENST00000359353 CFAP70Q5T0N1 1121 aa31.29■■■□□ 2.6
DDX42-201ENST00000359353 EFCAB2Q5VUJ9 269 aa31.29■■■□□ 2.6
DDX42-201ENST00000359353 NEUROD2Q15784 382 aa31.28■■■□□ 2.6
DDX42-201ENST00000359353 SCAF11Q99590 1463 aaKnown RBP31.28■■■□□ 2.6
DDX42-201ENST00000359353 IGHDP01880 384 aa31.28■■■□□ 2.6
DDX42-201ENST00000359353 TNNT2P45379 298 aaPredicted RBP31.28■■■□□ 2.6
DDX42-201ENST00000359353 CDCA8Q53HL2 280 aa31.27■■■□□ 2.6
DDX42-201ENST00000359353 SPAG9O60271 1321 aaKnown RBP31.25■■■□□ 2.59
DDX42-201ENST00000359353 GSE1Q14687 1217 aa31.25■■■□□ 2.59
DDX42-201ENST00000359353 FRAT1Q92837 279 aaPredicted RBP31.25■■■□□ 2.59
DDX42-201ENST00000359353 SYNMO15061 1565 aa31.24■■■□□ 2.59
DDX42-201ENST00000359353 CARD14Q9BXL6 1004 aa31.24■■■□□ 2.59
DDX42-201ENST00000359353 MYOM1P52179 1685 aa31.24■■■□□ 2.59
DDX42-201ENST00000359353 PANK1Q8TE04 598 aa31.23■■■□□ 2.59
DDX42-201ENST00000359353 FRAT2O75474 233 aaPredicted RBP31.23■■■□□ 2.59
DDX42-201ENST00000359353 TRMT2AQ8IZ69 625 aaKnown RBP31.22■■■□□ 2.59
DDX42-201ENST00000359353 RRP7AQ9Y3A4 280 aaKnown RBP31.22■■■□□ 2.59
DDX42-201ENST00000359353 PIK3C2GO75747 1445 aa31.22■■■□□ 2.59
DDX42-201ENST00000359353 CLTCL1P53675 1640 aa31.21■■■□□ 2.59
DDX42-201ENST00000359353 COG6Q9Y2V7 657 aa31.21■■■□□ 2.59
DDX42-201ENST00000359353 NKTRP30414 1462 aaKnown RBP31.21■■■□□ 2.59
DDX42-201ENST00000359353 PLCH2O75038 1416 aa31.21■■■□□ 2.59
DDX42-201ENST00000359353 CANXP27824 592 aaKnown RBP31.19■■■□□ 2.58
DDX42-201ENST00000359353 SPHKAPQ2M3C7 1700 aa31.19■■■□□ 2.58
DDX42-201ENST00000359353 ABCC2Q92887 1545 aa31.18■■■□□ 2.58
DDX42-201ENST00000359353 ADGRF5Q8IZF2 1346 aa31.17■■■□□ 2.58
DDX42-201ENST00000359353 SEC24BO95487 1268 aa31.17■■■□□ 2.58
DDX42-201ENST00000359353 UGGT1Q9NYU2 1555 aa31.17■■■□□ 2.58
DDX42-201ENST00000359353 KIF3BO15066 747 aa31.16■■■□□ 2.58
DDX42-201ENST00000359353 E9PSI1 815 aa31.15■■■□□ 2.58
DDX42-201ENST00000359353 TRPM2O94759 1503 aa31.14■■■□□ 2.58
DDX42-201ENST00000359353 ABCC1P33527 1531 aa31.14■■■□□ 2.58
DDX42-201ENST00000359353 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.14■■■□□ 2.58
DDX42-201ENST00000359353 TNNQ9UQP3 1299 aa31.14■■■□□ 2.58
DDX42-201ENST00000359353 BCL2L13Q9BXK5 485 aa31.13■■■□□ 2.57
DDX42-201ENST00000359353 CEP152O94986 1710 aa31.12■■■□□ 2.57
DDX42-201ENST00000359353 CLASP1Q7Z460 1538 aa31.11■■■□□ 2.57
DDX42-201ENST00000359353 EIF3AQ14152 1382 aaKnown RBP31.11■■■□□ 2.57
DDX42-201ENST00000359353 CENPJQ9HC77 1338 aaPredicted RBP31.1■■■□□ 2.57
DDX42-201ENST00000359353 KDM5AP29375 1690 aaKnown RBP31.1■■■□□ 2.57
DDX42-201ENST00000359353 SCAPERQ9BY12 1400 aa31.1■■■□□ 2.57
DDX42-201ENST00000359353 WWC1Q8IX03 1113 aa31.09■■■□□ 2.57
DDX42-201ENST00000359353 ERVK-7P63135 1459 aa31.09■■■□□ 2.57
DDX42-201ENST00000359353 CHGAP10645 457 aaKnown RBP31.09■■■□□ 2.57
DDX42-201ENST00000359353 USP19O94966 1318 aa31.06■■■□□ 2.56
DDX42-201ENST00000359353 ZCCHC11Q5TAX3 1644 aaKnown RBP31.06■■■□□ 2.56
DDX42-201ENST00000359353 CLUAP1Q96AJ1 413 aa31.06■■■□□ 2.56
DDX42-201ENST00000359353 PTPRTO14522 1441 aa31.05■■■□□ 2.56
DDX42-201ENST00000359353 NPC1L1Q9UHC9 1359 aa31.04■■■□□ 2.56
DDX42-201ENST00000359353 SLKQ9H2G2 1235 aaPredicted RBP31.04■■■□□ 2.56
DDX42-201ENST00000359353 TRAK1Q9UPV9 953 aa31.03■■■□□ 2.56
DDX42-201ENST00000359353 SLC12A5Q9H2X9 1139 aa31.02■■■□□ 2.56
DDX42-201ENST00000359353 SENP3Q9H4L4 574 aaPredicted RBP31.02■■■□□ 2.56
DDX42-201ENST00000359353 ZFYVE16Q7Z3T8 1539 aa31.02■■■□□ 2.56
DDX42-201ENST00000359353 SHROOM2Q13796 1616 aa31.01■■■□□ 2.55
DDX42-201ENST00000359353 RLBP1P12271 317 aa31■■■□□ 2.55
DDX42-201ENST00000359353 CGNL1Q0VF96 1302 aa31■■■□□ 2.55
DDX42-201ENST00000359353 MORC1Q86VD1 984 aa31■■■□□ 2.55
DDX42-201ENST00000359353 ABCA6Q8N139 1617 aa30.98■■■□□ 2.55
DDX42-201ENST00000359353 KANK1Q14678 1352 aa30.97■■■□□ 2.55
DDX42-201ENST00000359353 CFAP65Q6ZU64 1925 aaKnown RBP30.97■■■□□ 2.55
DDX42-201ENST00000359353 PDE3AQ14432 1141 aa30.96■■■□□ 2.55
DDX42-201ENST00000359353 TCP11L2Q8N4U5 519 aa30.96■■■□□ 2.55
DDX42-201ENST00000359353 PCDHB15Q9Y5E8 787 aa30.96■■■□□ 2.55
DDX42-201ENST00000359353 TMEM132EQ6IEE7 984 aa30.96■■■□□ 2.55
DDX42-201ENST00000359353 NSD3Q9BZ95 1437 aa30.95■■■□□ 2.55
DDX42-201ENST00000359353 TET3O43151 1660 aa30.93■■■□□ 2.54
DDX42-201ENST00000359353 RARSP54136 660 aaKnown RBP30.93■■■□□ 2.54
DDX42-201ENST00000359353 STAC3Q96MF2 364 aa30.92■■■□□ 2.54
DDX42-201ENST00000359353 NUTM2DQ5VT03 806 aaPredicted RBP30.91■■■□□ 2.54
DDX42-201ENST00000359353 MAP3K4Q9Y6R4 1608 aa30.91■■■□□ 2.54
DDX42-201ENST00000359353 POGKQ9P215 609 aa30.91■■■□□ 2.54
DDX42-201ENST00000359353 SPRYD3Q8NCJ5 442 aa30.89■■■□□ 2.54
DDX42-201ENST00000359353 MTHFSP49914 203 aa30.89■■■□□ 2.54
DDX42-201ENST00000359353 POLR3AO14802 1390 aaPredicted RBP30.88■■■□□ 2.53
DDX42-201ENST00000359353 VIRMAQ69YN4 1812 aaKnown RBP30.88■■■□□ 2.53
DDX42-201ENST00000359353 RTEL1-TNFRSF6BF6WH68 1400 aa30.87■■■□□ 2.53
DDX42-201ENST00000359353 RUNDC1Q96C34 613 aa30.87■■■□□ 2.53
DDX42-201ENST00000359353 DEPDC5O75140 1603 aa30.87■■■□□ 2.53
DDX42-201ENST00000359353 ATP7AQ04656 1500 aa30.87■■■□□ 2.53
DDX42-201ENST00000359353 NOS1P29475 1434 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms