RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
GGPS1-202ENST00000358966 SYNMO15061 1565 aa17.42■□□□□ 0.38
GGPS1-202ENST00000358966 IDI1Q13907 227 aa17.41■□□□□ 0.38
GGPS1-202ENST00000358966 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
GGPS1-202ENST00000358966 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
GGPS1-202ENST00000358966 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
GGPS1-202ENST00000358966 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
GGPS1-202ENST00000358966 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
GGPS1-202ENST00000358966 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
GGPS1-202ENST00000358966 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
GGPS1-202ENST00000358966 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
GGPS1-202ENST00000358966 LAMC1P11047 1609 aa17.34■□□□□ 0.37
GGPS1-202ENST00000358966 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
GGPS1-202ENST00000358966 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
GGPS1-202ENST00000358966 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.36
GGPS1-202ENST00000358966 IQGAP1P46940 1657 aa17.33■□□□□ 0.36
GGPS1-202ENST00000358966 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.36
GGPS1-202ENST00000358966 ZC3H13Q5T200 1668 aaKnown RBP17.33■□□□□ 0.36
GGPS1-202ENST00000358966 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.36
GGPS1-202ENST00000358966 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
GGPS1-202ENST00000358966 MYOM2P54296 1465 aa17.32■□□□□ 0.36
GGPS1-202ENST00000358966 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
GGPS1-202ENST00000358966 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
GGPS1-202ENST00000358966 PPLO60437 1756 aa17.32■□□□□ 0.36
GGPS1-202ENST00000358966 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
GGPS1-202ENST00000358966 ARHGAP31Q2M1Z3 1444 aa17.31■□□□□ 0.36
GGPS1-202ENST00000358966 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
GGPS1-202ENST00000358966 TMF1P82094 1093 aa17.3■□□□□ 0.36
GGPS1-202ENST00000358966 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
GGPS1-202ENST00000358966 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
GGPS1-202ENST00000358966 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
GGPS1-202ENST00000358966 NRXN1Q9ULB1 1477 aa17.28■□□□□ 0.36
GGPS1-202ENST00000358966 PANK3Q9H999 370 aa17.27■□□□□ 0.36
GGPS1-202ENST00000358966 ERVK-7P63135 1459 aa17.27■□□□□ 0.36
GGPS1-202ENST00000358966 AGLP35573 1532 aa17.27■□□□□ 0.35
GGPS1-202ENST00000358966 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.35
GGPS1-202ENST00000358966 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.35
GGPS1-202ENST00000358966 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.35
GGPS1-202ENST00000358966 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
GGPS1-202ENST00000358966 REREQ9P2R6 1566 aa17.26■□□□□ 0.35
GGPS1-202ENST00000358966 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
GGPS1-202ENST00000358966 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
GGPS1-202ENST00000358966 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
GGPS1-202ENST00000358966 ESF1Q9H501 851 aaKnown RBP17.24■□□□□ 0.35
GGPS1-202ENST00000358966 STK26Q9P289 416 aa17.24■□□□□ 0.35
GGPS1-202ENST00000358966 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
GGPS1-202ENST00000358966 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
GGPS1-202ENST00000358966 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
GGPS1-202ENST00000358966 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
GGPS1-202ENST00000358966 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
GGPS1-202ENST00000358966 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
GGPS1-202ENST00000358966 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
GGPS1-202ENST00000358966 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
GGPS1-202ENST00000358966 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
GGPS1-202ENST00000358966 RPGRIP1LQ68CZ1 1315 aa17.2■□□□□ 0.34
GGPS1-202ENST00000358966 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
GGPS1-202ENST00000358966 UBE2Q2Q8WVN8 375 aa17.17■□□□□ 0.34
GGPS1-202ENST00000358966 SPATA31D1Q6ZQQ2 1576 aa17.15■□□□□ 0.34
GGPS1-202ENST00000358966 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
GGPS1-202ENST00000358966 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
GGPS1-202ENST00000358966 MYOM1P52179 1685 aa17.15■□□□□ 0.34
GGPS1-202ENST00000358966 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
GGPS1-202ENST00000358966 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
GGPS1-202ENST00000358966 SETBP1Q9Y6X0 1596 aa17.14■□□□□ 0.33
GGPS1-202ENST00000358966 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
GGPS1-202ENST00000358966 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
GGPS1-202ENST00000358966 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
GGPS1-202ENST00000358966 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
GGPS1-202ENST00000358966 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
GGPS1-202ENST00000358966 PARD3Q8TEW0 1356 aa17.12■□□□□ 0.33
GGPS1-202ENST00000358966 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
GGPS1-202ENST00000358966 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
GGPS1-202ENST00000358966 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
GGPS1-202ENST00000358966 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
GGPS1-202ENST00000358966 RALBP1Q15311 655 aa17.1■□□□□ 0.33
GGPS1-202ENST00000358966 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
GGPS1-202ENST00000358966 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
GGPS1-202ENST00000358966 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
GGPS1-202ENST00000358966 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
GGPS1-202ENST00000358966 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
GGPS1-202ENST00000358966 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
GGPS1-202ENST00000358966 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
GGPS1-202ENST00000358966 TNRQ92752 1358 aa17.09■□□□□ 0.33
GGPS1-202ENST00000358966 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.33
GGPS1-202ENST00000358966 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.33
GGPS1-202ENST00000358966 PRAM1Q96QH2 718 aa17.08■□□□□ 0.33
GGPS1-202ENST00000358966 ZFYVE9O95405 1425 aa17.07■□□□□ 0.32
GGPS1-202ENST00000358966 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
GGPS1-202ENST00000358966 BCANQ96GW7 911 aa17.06■□□□□ 0.32
GGPS1-202ENST00000358966 PTPRMP28827 1452 aa17.06■□□□□ 0.32
GGPS1-202ENST00000358966 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
GGPS1-202ENST00000358966 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
GGPS1-202ENST00000358966 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
GGPS1-202ENST00000358966 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
GGPS1-202ENST00000358966 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
GGPS1-202ENST00000358966 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
GGPS1-202ENST00000358966 POGKQ9P215 609 aa17.04■□□□□ 0.32
GGPS1-202ENST00000358966 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
GGPS1-202ENST00000358966 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
GGPS1-202ENST00000358966 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms