RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
PTPN5-201ENST00000358540 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
PTPN5-201ENST00000358540 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
PTPN5-201ENST00000358540 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
PTPN5-201ENST00000358540 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
PTPN5-201ENST00000358540 NLRP13Q86W25 1043 aa21.54■■□□□ 1.04
PTPN5-201ENST00000358540 FANCIQ9NVI1 1328 aa21.52■■□□□ 1.04
PTPN5-201ENST00000358540 NOS1P29475 1434 aa21.52■■□□□ 1.03
PTPN5-201ENST00000358540 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
PTPN5-201ENST00000358540 MROH2AA6NES4 1674 aa21.51■■□□□ 1.03
PTPN5-201ENST00000358540 STAC3Q96MF2 364 aa21.51■■□□□ 1.03
PTPN5-201ENST00000358540 NEO1Q92859 1461 aa21.5■■□□□ 1.03
PTPN5-201ENST00000358540 YEATS2Q9ULM3 1422 aa21.49■■□□□ 1.03
PTPN5-201ENST00000358540 LMTK2Q8IWU2 1503 aa21.49■■□□□ 1.03
PTPN5-201ENST00000358540 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
PTPN5-201ENST00000358540 LRPPRCP42704 1394 aaKnown RBP21.49■■□□□ 1.03
PTPN5-201ENST00000358540 KIF1BO60333 1816 aa21.48■■□□□ 1.03
PTPN5-201ENST00000358540 KNSTRNQ9Y448 316 aa21.47■■□□□ 1.03
PTPN5-201ENST00000358540 MAP3K4Q9Y6R4 1608 aa21.47■■□□□ 1.03
PTPN5-201ENST00000358540 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
PTPN5-201ENST00000358540 ABCC3O15438 1527 aa21.46■■□□□ 1.03
PTPN5-201ENST00000358540 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
PTPN5-201ENST00000358540 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
PTPN5-201ENST00000358540 DEKP35659 375 aaKnown RBP21.45■■□□□ 1.02
PTPN5-201ENST00000358540 TRAK1Q9UPV9 953 aa21.45■■□□□ 1.02
PTPN5-201ENST00000358540 MYOM2P54296 1465 aa21.45■■□□□ 1.02
PTPN5-201ENST00000358540 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
PTPN5-201ENST00000358540 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
PTPN5-201ENST00000358540 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
PTPN5-201ENST00000358540 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
PTPN5-201ENST00000358540 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
PTPN5-201ENST00000358540 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
PTPN5-201ENST00000358540 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
PTPN5-201ENST00000358540 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
PTPN5-201ENST00000358540 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
PTPN5-201ENST00000358540 NEURL4Q96JN8 1562 aa21.38■■□□□ 1.01
PTPN5-201ENST00000358540 RICTORQ6R327 1708 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 IFT172Q9UG01 1749 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 PPP2R1AP30153 589 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 PPP4R2Q9NY27 417 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 SIGLEC1Q9BZZ2 1709 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 CAMSAP1Q5T5Y3 1602 aa21.37■■□□□ 1.01
PTPN5-201ENST00000358540 IDI1Q13907 227 aa21.36■■□□□ 1.01
PTPN5-201ENST00000358540 KIAA1210Q9ULL0 1709 aa21.36■■□□□ 1.01
PTPN5-201ENST00000358540 NRXN1Q9ULB1 1477 aa21.35■■□□□ 1.01
PTPN5-201ENST00000358540 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
PTPN5-201ENST00000358540 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
PTPN5-201ENST00000358540 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
PTPN5-201ENST00000358540 TSPOAP1O95153 1857 aa21.34■■□□□ 1.01
PTPN5-201ENST00000358540 PIK3C2GO75747 1445 aa21.34■■□□□ 1.01
PTPN5-201ENST00000358540 SYNMO15061 1565 aa21.33■■□□□ 1.01
PTPN5-201ENST00000358540 FBXO31Q5XUX0 539 aaPredicted RBP21.33■■□□□ 1.01
PTPN5-201ENST00000358540 ADAMTS8Q9UP79 889 aa21.33■■□□□ 1
PTPN5-201ENST00000358540 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
PTPN5-201ENST00000358540 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
PTPN5-201ENST00000358540 MYOM1P52179 1685 aa21.32■■□□□ 1
PTPN5-201ENST00000358540 MLECQ14165 292 aa21.31■■□□□ 1
PTPN5-201ENST00000358540 KDM5AP29375 1690 aaKnown RBP21.3■■□□□ 1
PTPN5-201ENST00000358540 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
PTPN5-201ENST00000358540 PPLO60437 1756 aa21.29■■□□□ 1
PTPN5-201ENST00000358540 NBR1Q14596 966 aa21.29■■□□□ 1
PTPN5-201ENST00000358540 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
PTPN5-201ENST00000358540 STK26Q9P289 416 aa21.28■■□□□ 1
PTPN5-201ENST00000358540 DIP2BQ9P265 1576 aa21.28■■□□□ 1
PTPN5-201ENST00000358540 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
PTPN5-201ENST00000358540 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
PTPN5-201ENST00000358540 SLC12A5Q9H2X9 1139 aa21.27■■□□□ 1
PTPN5-201ENST00000358540 GLI2P10070 1586 aa21.27■■□□□ 1
PTPN5-201ENST00000358540 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
PTPN5-201ENST00000358540 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
PTPN5-201ENST00000358540 ANO8Q9HCE9 1232 aaPredicted RBP21.25■□□□□ 0.99
PTPN5-201ENST00000358540 TNNT2P45379 298 aaPredicted RBP21.25■□□□□ 0.99
PTPN5-201ENST00000358540 BLMP54132 1417 aaPredicted RBP21.24■□□□□ 0.99
PTPN5-201ENST00000358540 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
PTPN5-201ENST00000358540 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
PTPN5-201ENST00000358540 ARHGAP31Q2M1Z3 1444 aa21.22■□□□□ 0.99
PTPN5-201ENST00000358540 NEXMIFQ5QGS0 1516 aa21.22■□□□□ 0.99
PTPN5-201ENST00000358540 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
PTPN5-201ENST00000358540 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
PTPN5-201ENST00000358540 SLC52A1Q9NWF4 448 aa21.22■□□□□ 0.99
PTPN5-201ENST00000358540 PIK3C2BO00750 1634 aa21.21■□□□□ 0.99
PTPN5-201ENST00000358540 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
PTPN5-201ENST00000358540 STAG3Q9UJ98 1225 aa21.21■□□□□ 0.99
PTPN5-201ENST00000358540 SBNO2Q9Y2G9 1366 aa21.2■□□□□ 0.98
PTPN5-201ENST00000358540 NSD3Q9BZ95 1437 aa21.19■□□□□ 0.98
PTPN5-201ENST00000358540 CABP2Q9NPB3 220 aa21.19■□□□□ 0.98
PTPN5-201ENST00000358540 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
PTPN5-201ENST00000358540 MYO3AQ8NEV4 1616 aa21.18■□□□□ 0.98
PTPN5-201ENST00000358540 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
PTPN5-201ENST00000358540 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
PTPN5-201ENST00000358540 CCDC136Q96JN2 1154 aa21.17■□□□□ 0.98
PTPN5-201ENST00000358540 PLEKHH1Q9ULM0 1364 aa21.16■□□□□ 0.98
PTPN5-201ENST00000358540 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
PTPN5-201ENST00000358540 ZMYM4Q5VZL5 1548 aa21.16■□□□□ 0.98
PTPN5-201ENST00000358540 ZC3H13Q5T200 1668 aaKnown RBP21.16■□□□□ 0.98
PTPN5-201ENST00000358540 NOP58Q9Y2X3 529 aaKnown RBP21.16■□□□□ 0.98
PTPN5-201ENST00000358540 PLIN1O60240 522 aa21.15■□□□□ 0.98
PTPN5-201ENST00000358540 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
PTPN5-201ENST00000358540 PREX1Q8TCU6 1659 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms