RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
PHTF1-201ENST00000357783 CFAP65Q6ZU64 1925 aaKnown RBP21.26■□□□□ 0.99
PHTF1-201ENST00000357783 CFAP70Q5T0N1 1121 aa21.26■□□□□ 0.99
PHTF1-201ENST00000357783 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
PHTF1-201ENST00000357783 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
PHTF1-201ENST00000357783 LMTK2Q8IWU2 1503 aa21.25■□□□□ 0.99
PHTF1-201ENST00000357783 MYOM2P54296 1465 aa21.25■□□□□ 0.99
PHTF1-201ENST00000357783 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
PHTF1-201ENST00000357783 FRMPD1Q5SYB0 1578 aa21.25■□□□□ 0.99
PHTF1-201ENST00000357783 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
PHTF1-201ENST00000357783 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
PHTF1-201ENST00000357783 IFT172Q9UG01 1749 aa21.24■□□□□ 0.99
PHTF1-201ENST00000357783 SYNMO15061 1565 aa21.23■□□□□ 0.99
PHTF1-201ENST00000357783 GGT6Q6P531 493 aa21.23■□□□□ 0.99
PHTF1-201ENST00000357783 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
PHTF1-201ENST00000357783 KNSTRNQ9Y448 316 aa21.23■□□□□ 0.99
PHTF1-201ENST00000357783 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
PHTF1-201ENST00000357783 MYOM1P52179 1685 aa21.2■□□□□ 0.98
PHTF1-201ENST00000357783 NPATQ14207 1427 aa21.19■□□□□ 0.98
PHTF1-201ENST00000357783 KDM5AP29375 1690 aaKnown RBP21.19■□□□□ 0.98
PHTF1-201ENST00000357783 ADGRB3O60242 1522 aa21.18■□□□□ 0.98
PHTF1-201ENST00000357783 RAPGEF3O95398 923 aa21.18■□□□□ 0.98
PHTF1-201ENST00000357783 NOS1P29475 1434 aa21.17■□□□□ 0.98
PHTF1-201ENST00000357783 BLMP54132 1417 aaPredicted RBP21.17■□□□□ 0.98
PHTF1-201ENST00000357783 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
PHTF1-201ENST00000357783 NRXN1Q9ULB1 1477 aa21.15■□□□□ 0.98
PHTF1-201ENST00000357783 ASXL1Q8IXJ9 1541 aa21.15■□□□□ 0.98
PHTF1-201ENST00000357783 PPP2R1AP30153 589 aa21.15■□□□□ 0.98
PHTF1-201ENST00000357783 ERVK-7P63135 1459 aa21.14■□□□□ 0.97
PHTF1-201ENST00000357783 NEO1Q92859 1461 aa21.14■□□□□ 0.97
PHTF1-201ENST00000357783 ABCC3O15438 1527 aa21.14■□□□□ 0.97
PHTF1-201ENST00000357783 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
PHTF1-201ENST00000357783 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
PHTF1-201ENST00000357783 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
PHTF1-201ENST00000357783 INSRP06213 1382 aa21.12■□□□□ 0.97
PHTF1-201ENST00000357783 PPLO60437 1756 aa21.12■□□□□ 0.97
PHTF1-201ENST00000357783 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
PHTF1-201ENST00000357783 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
PHTF1-201ENST00000357783 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
PHTF1-201ENST00000357783 CAMSAP1Q5T5Y3 1602 aa21.1■□□□□ 0.97
PHTF1-201ENST00000357783 RRP1P56182 461 aaKnown RBP21.1■□□□□ 0.97
PHTF1-201ENST00000357783 DIP2CQ9Y2E4 1556 aa21.09■□□□□ 0.97
PHTF1-201ENST00000357783 MYO3AQ8NEV4 1616 aa21.08■□□□□ 0.97
PHTF1-201ENST00000357783 SIGLEC1Q9BZZ2 1709 aa21.08■□□□□ 0.96
PHTF1-201ENST00000357783 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
PHTF1-201ENST00000357783 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
PHTF1-201ENST00000357783 ANP32EQ9BTT0 268 aa21.07■□□□□ 0.96
PHTF1-201ENST00000357783 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
PHTF1-201ENST00000357783 PIK3C2GO75747 1445 aa21.07■□□□□ 0.96
PHTF1-201ENST00000357783 TRAK1Q9UPV9 953 aa21.06■□□□□ 0.96
PHTF1-201ENST00000357783 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
PHTF1-201ENST00000357783 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
PHTF1-201ENST00000357783 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
PHTF1-201ENST00000357783 C14orf93Q9H972 538 aaKnown RBP21.04■□□□□ 0.96
PHTF1-201ENST00000357783 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
PHTF1-201ENST00000357783 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
PHTF1-201ENST00000357783 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
PHTF1-201ENST00000357783 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
PHTF1-201ENST00000357783 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.95
PHTF1-201ENST00000357783 ADGRB1O14514 1584 aa21.01■□□□□ 0.95
PHTF1-201ENST00000357783 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
PHTF1-201ENST00000357783 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
PHTF1-201ENST00000357783 YEATS2Q9ULM3 1422 aa21.01■□□□□ 0.95
PHTF1-201ENST00000357783 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
PHTF1-201ENST00000357783 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
PHTF1-201ENST00000357783 PIK3C2BO00750 1634 aa21■□□□□ 0.95
PHTF1-201ENST00000357783 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
PHTF1-201ENST00000357783 FANCIQ9NVI1 1328 aa20.97■□□□□ 0.95
PHTF1-201ENST00000357783 NEXMIFQ5QGS0 1516 aa20.96■□□□□ 0.95
PHTF1-201ENST00000357783 PLIN1O60240 522 aa20.95■□□□□ 0.94
PHTF1-201ENST00000357783 CCDC146Q8IYE0 955 aa20.95■□□□□ 0.94
PHTF1-201ENST00000357783 GLI2P10070 1586 aa20.95■□□□□ 0.94
PHTF1-201ENST00000357783 MSH5O43196 834 aa20.94■□□□□ 0.94
PHTF1-201ENST00000357783 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
PHTF1-201ENST00000357783 IDI1Q13907 227 aa20.93■□□□□ 0.94
PHTF1-201ENST00000357783 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
PHTF1-201ENST00000357783 SLC12A5Q9H2X9 1139 aa20.93■□□□□ 0.94
PHTF1-201ENST00000357783 NSD3Q9BZ95 1437 aa20.93■□□□□ 0.94
PHTF1-201ENST00000357783 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
PHTF1-201ENST00000357783 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
PHTF1-201ENST00000357783 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
PHTF1-201ENST00000357783 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
PHTF1-201ENST00000357783 GOLGA2Q08379 1002 aa20.89■□□□□ 0.93
PHTF1-201ENST00000357783 FAM69CQ0P6D2 419 aa20.89■□□□□ 0.93
PHTF1-201ENST00000357783 DUSP27Q5VZP5 1158 aa20.88■□□□□ 0.93
PHTF1-201ENST00000357783 PREX1Q8TCU6 1659 aa20.88■□□□□ 0.93
PHTF1-201ENST00000357783 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
PHTF1-201ENST00000357783 TSPOAP1O95153 1857 aa20.87■□□□□ 0.93
PHTF1-201ENST00000357783 APAF1O14727 1248 aa20.87■□□□□ 0.93
PHTF1-201ENST00000357783 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
PHTF1-201ENST00000357783 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
PHTF1-201ENST00000357783 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
PHTF1-201ENST00000357783 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
PHTF1-201ENST00000357783 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
PHTF1-201ENST00000357783 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
PHTF1-201ENST00000357783 TULP4Q9NRJ4 1543 aa20.85■□□□□ 0.93
PHTF1-201ENST00000357783 SAFB2Q14151 953 aaKnown RBP eCLIP20.85■□□□□ 0.93
PHTF1-201ENST00000357783 EVC2Q86UK5 1308 aa20.84■□□□□ 0.93
PHTF1-201ENST00000357783 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
PHTF1-201ENST00000357783 STK26Q9P289 416 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms