RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 USP19O94966 1318 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 CLUAP1Q96AJ1 413 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 CARMIL2Q6F5E8 1435 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 PANK1Q8TE04 598 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 GRIN2AQ12879 1464 aa9.84□□□□□ -0.83
CD46-204ENST00000357714 TRPM1Q7Z4N2 1603 aa9.84□□□□□ -0.83
CD46-204ENST00000357714 RRAGDQ9NQL2 400 aaPredicted RBP9.84□□□□□ -0.83
CD46-204ENST00000357714 NKTRP30414 1462 aaKnown RBP9.84□□□□□ -0.83
CD46-204ENST00000357714 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
CD46-204ENST00000357714 CENPJQ9HC77 1338 aaPredicted RBP9.83□□□□□ -0.84
CD46-204ENST00000357714 PDE3AQ14432 1141 aa9.83□□□□□ -0.84
CD46-204ENST00000357714 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
CD46-204ENST00000357714 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
CD46-204ENST00000357714 GZF1Q9H116 711 aaPredicted RBP9.83□□□□□ -0.84
CD46-204ENST00000357714 RSPH4AQ5TD94 716 aa9.82□□□□□ -0.84
CD46-204ENST00000357714 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
CD46-204ENST00000357714 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
CD46-204ENST00000357714 ZMYND15Q9H091 742 aa9.82□□□□□ -0.84
CD46-204ENST00000357714 PRDM15P57071 1507 aaPredicted RBP9.82□□□□□ -0.84
CD46-204ENST00000357714 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
CD46-204ENST00000357714 NAP1L5Q96NT1 182 aaPredicted RBP9.81□□□□□ -0.84
CD46-204ENST00000357714 DMRT2Q9Y5R5 561 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 ABCC10Q5T3U5 1492 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 ADCY10Q96PN6 1610 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 GLIPR1L2Q4G1C9 344 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 SYNJ2O15056 1496 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
CD46-204ENST00000357714 WDR7Q9Y4E6 1490 aa9.8□□□□□ -0.84
CD46-204ENST00000357714 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
CD46-204ENST00000357714 PMFBP1Q8TBY8 1022 aa9.8□□□□□ -0.84
CD46-204ENST00000357714 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
CD46-204ENST00000357714 CDC42BPAQ5VT25 1732 aa9.8□□□□□ -0.84
CD46-204ENST00000357714 ATP10BO94823 1461 aa9.8□□□□□ -0.84
CD46-204ENST00000357714 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
CD46-204ENST00000357714 PIK3C2GO75747 1445 aa9.79□□□□□ -0.84
CD46-204ENST00000357714 NUP160Q12769 1436 aa9.79□□□□□ -0.84
CD46-204ENST00000357714 XRCC6P12956 609 aaKnown RBP eCLIP9.79□□□□□ -0.84
CD46-204ENST00000357714 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
CD46-204ENST00000357714 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
CD46-204ENST00000357714 PDZRN3Q9UPQ7 1066 aa9.78□□□□□ -0.84
CD46-204ENST00000357714 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.84
CD46-204ENST00000357714 MCM4P33991 863 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 PANK2Q9BZ23 570 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 ASXL1Q8IXJ9 1541 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 EIF2AK4Q9P2K8 1649 aaKnown RBP9.77□□□□□ -0.85
CD46-204ENST00000357714 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 PCDHB15Q9Y5E8 787 aa9.77□□□□□ -0.85
CD46-204ENST00000357714 RWDD1Q9H446 243 aaPredicted RBP9.76□□□□□ -0.85
CD46-204ENST00000357714 CHD1O14646 1710 aa9.76□□□□□ -0.85
CD46-204ENST00000357714 TNNT2P45379 298 aaPredicted RBP9.75□□□□□ -0.85
CD46-204ENST00000357714 MFAP1P55081 439 aaKnown RBP9.75□□□□□ -0.85
CD46-204ENST00000357714 ARHGEF5Q12774 1597 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 LAMC1P11047 1609 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 TRAK2O60296 914 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 CLASP1Q7Z460 1538 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 RARSP54136 660 aaKnown RBP9.75□□□□□ -0.85
CD46-204ENST00000357714 CHMP5Q9NZZ3 219 aa9.75□□□□□ -0.85
CD46-204ENST00000357714 RLBP1P12271 317 aa9.74□□□□□ -0.85
CD46-204ENST00000357714 SHROOM2Q13796 1616 aa9.74□□□□□ -0.85
CD46-204ENST00000357714 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
CD46-204ENST00000357714 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
CD46-204ENST00000357714 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
CD46-204ENST00000357714 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
CD46-204ENST00000357714 CLCN1P35523 988 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 AAMPQ13685 434 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 FSD2A1L4K1 749 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
CD46-204ENST00000357714 ABCC2Q92887 1545 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 NLRP1Q9C000 1473 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 MRE11P49959 708 aa9.73□□□□□ -0.85
CD46-204ENST00000357714 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
CD46-204ENST00000357714 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
CD46-204ENST00000357714 ABCA8O94911 1581 aa9.72□□□□□ -0.85
CD46-204ENST00000357714 MORC1Q86VD1 984 aa9.72□□□□□ -0.85
CD46-204ENST00000357714 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
CD46-204ENST00000357714 SYCP2Q9BX26 1530 aa9.72□□□□□ -0.85
CD46-204ENST00000357714 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.85
CD46-204ENST00000357714 RUNDC1Q96C34 613 aa9.71□□□□□ -0.86
CD46-204ENST00000357714 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
CD46-204ENST00000357714 CARD14Q9BXL6 1004 aa9.71□□□□□ -0.86
CD46-204ENST00000357714 ARHGAP5Q13017 1502 aa9.71□□□□□ -0.86
CD46-204ENST00000357714 SYNMO15061 1565 aa9.7□□□□□ -0.86
CD46-204ENST00000357714 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
CD46-204ENST00000357714 GRPEL1Q9HAV7 217 aa9.7□□□□□ -0.86
CD46-204ENST00000357714 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 CFAP70Q5T0N1 1121 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 ATP10AO60312 1499 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
CD46-204ENST00000357714 STAC3Q96MF2 364 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 ESPNB1AK53 854 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 ZKSCAN2Q63HK3 967 aa9.69□□□□□ -0.86
CD46-204ENST00000357714 UNC13BO14795 1591 aa9.68□□□□□ -0.86
CD46-204ENST00000357714 DZIP1LQ8IYY4 767 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms