RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 C3P01024 1663 aa17.48■□□□□ 0.39
RTFDC1-202ENST00000357348 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
RTFDC1-202ENST00000357348 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
RTFDC1-202ENST00000357348 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
RTFDC1-202ENST00000357348 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
RTFDC1-202ENST00000357348 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
RTFDC1-202ENST00000357348 PRAG1Q86YV5 1406 aa17.44■□□□□ 0.38
RTFDC1-202ENST00000357348 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
RTFDC1-202ENST00000357348 TNRQ92752 1358 aa17.43■□□□□ 0.38
RTFDC1-202ENST00000357348 UHRF1BP1Q6BDS2 1440 aa17.43■□□□□ 0.38
RTFDC1-202ENST00000357348 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
RTFDC1-202ENST00000357348 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
RTFDC1-202ENST00000357348 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
RTFDC1-202ENST00000357348 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-202ENST00000357348 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-202ENST00000357348 PPLO60437 1756 aa17.41■□□□□ 0.38
RTFDC1-202ENST00000357348 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
RTFDC1-202ENST00000357348 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
RTFDC1-202ENST00000357348 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
RTFDC1-202ENST00000357348 NEURL4Q96JN8 1562 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 CFAP70Q5T0N1 1121 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 ERICH6BQ5W0A0 696 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
RTFDC1-202ENST00000357348 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
RTFDC1-202ENST00000357348 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
RTFDC1-202ENST00000357348 USP47Q96K76 1375 aa17.34■□□□□ 0.37
RTFDC1-202ENST00000357348 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
RTFDC1-202ENST00000357348 MYOM2P54296 1465 aa17.34■□□□□ 0.37
RTFDC1-202ENST00000357348 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-202ENST00000357348 MSH5O43196 834 aa17.33■□□□□ 0.37
RTFDC1-202ENST00000357348 UBR1Q8IWV7 1749 aa17.32■□□□□ 0.36
RTFDC1-202ENST00000357348 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
RTFDC1-202ENST00000357348 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
RTFDC1-202ENST00000357348 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
RTFDC1-202ENST00000357348 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
RTFDC1-202ENST00000357348 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
RTFDC1-202ENST00000357348 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
RTFDC1-202ENST00000357348 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
RTFDC1-202ENST00000357348 PTPRMP28827 1452 aa17.29■□□□□ 0.36
RTFDC1-202ENST00000357348 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
RTFDC1-202ENST00000357348 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
RTFDC1-202ENST00000357348 NRXN1Q9ULB1 1477 aa17.28■□□□□ 0.36
RTFDC1-202ENST00000357348 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
RTFDC1-202ENST00000357348 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
RTFDC1-202ENST00000357348 C14orf93Q9H972 538 aaKnown RBP17.26■□□□□ 0.35
RTFDC1-202ENST00000357348 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
RTFDC1-202ENST00000357348 TMEM2Q9UHN6 1383 aa17.25■□□□□ 0.35
RTFDC1-202ENST00000357348 LTKP29376 864 aa17.25■□□□□ 0.35
RTFDC1-202ENST00000357348 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
RTFDC1-202ENST00000357348 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 STK26Q9P289 416 aa17.24■□□□□ 0.35
RTFDC1-202ENST00000357348 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
RTFDC1-202ENST00000357348 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
RTFDC1-202ENST00000357348 KDM5AP29375 1690 aaKnown RBP17.22■□□□□ 0.35
RTFDC1-202ENST00000357348 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
RTFDC1-202ENST00000357348 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
RTFDC1-202ENST00000357348 IQGAP1P46940 1657 aa17.21■□□□□ 0.35
RTFDC1-202ENST00000357348 LAMC1P11047 1609 aa17.21■□□□□ 0.35
RTFDC1-202ENST00000357348 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
RTFDC1-202ENST00000357348 SCAF11Q99590 1463 aaKnown RBP17.2■□□□□ 0.34
RTFDC1-202ENST00000357348 EID1Q9Y6B2 187 aa17.2■□□□□ 0.34
RTFDC1-202ENST00000357348 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
RTFDC1-202ENST00000357348 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
RTFDC1-202ENST00000357348 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
RTFDC1-202ENST00000357348 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
RTFDC1-202ENST00000357348 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
RTFDC1-202ENST00000357348 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
RTFDC1-202ENST00000357348 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
RTFDC1-202ENST00000357348 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
RTFDC1-202ENST00000357348 SETBP1Q9Y6X0 1596 aa17.16■□□□□ 0.34
RTFDC1-202ENST00000357348 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
RTFDC1-202ENST00000357348 TESK2Q96S53 571 aa17.16■□□□□ 0.34
RTFDC1-202ENST00000357348 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
RTFDC1-202ENST00000357348 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
RTFDC1-202ENST00000357348 SLIT1O75093 1534 aa17.14■□□□□ 0.33
RTFDC1-202ENST00000357348 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
RTFDC1-202ENST00000357348 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
RTFDC1-202ENST00000357348 METP08581 1390 aa17.14■□□□□ 0.33
RTFDC1-202ENST00000357348 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
RTFDC1-202ENST00000357348 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
RTFDC1-202ENST00000357348 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
RTFDC1-202ENST00000357348 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
RTFDC1-202ENST00000357348 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
RTFDC1-202ENST00000357348 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 HSPA2P54652 639 aa17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 ANKLE2Q86XL3 938 aa17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
RTFDC1-202ENST00000357348 TMF1P82094 1093 aa17.1■□□□□ 0.33
RTFDC1-202ENST00000357348 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
RTFDC1-202ENST00000357348 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
RTFDC1-202ENST00000357348 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
RTFDC1-202ENST00000357348 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms