RNA–Protein interactions for RNA: ENST00000356825.8

SMAD2-202, Transcript of SMAD family member 2, humanhuman

TSL 1 (best) BASIC

Gene SMAD2, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-202ENST00000356825 TEFQ10587 303 aa17.57■□□□□ 0.4
SMAD2-202ENST00000356825 RDXP35241 583 aaKnown RBP17.56■□□□□ 0.4
SMAD2-202ENST00000356825 NFXL1Q6ZNB6 911 aa17.55■□□□□ 0.4
SMAD2-202ENST00000356825 CPLX1O14810 134 aa17.54■□□□□ 0.4
SMAD2-202ENST00000356825 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
SMAD2-202ENST00000356825 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
SMAD2-202ENST00000356825 CCDC144AA2RUR9 1427 aa17.53■□□□□ 0.4
SMAD2-202ENST00000356825 PSME1Q06323 249 aa17.53■□□□□ 0.4
SMAD2-202ENST00000356825 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
SMAD2-202ENST00000356825 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
SMAD2-202ENST00000356825 SOGA1O94964 1423 aa17.52■□□□□ 0.4
SMAD2-202ENST00000356825 RUFY1Q96T51 708 aa17.52■□□□□ 0.39
SMAD2-202ENST00000356825 EVC2Q86UK5 1308 aa17.51■□□□□ 0.39
SMAD2-202ENST00000356825 NAP1L1P55209 391 aaKnown RBP17.51■□□□□ 0.39
SMAD2-202ENST00000356825 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
SMAD2-202ENST00000356825 CALRP27797 417 aaKnown RBP17.51■□□□□ 0.39
SMAD2-202ENST00000356825 MPHOSPH9Q99550 1183 aa17.51■□□□□ 0.39
SMAD2-202ENST00000356825 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
SMAD2-202ENST00000356825 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
SMAD2-202ENST00000356825 AK7Q96M32 723 aa17.5■□□□□ 0.39
SMAD2-202ENST00000356825 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
SMAD2-202ENST00000356825 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
SMAD2-202ENST00000356825 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
SMAD2-202ENST00000356825 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
SMAD2-202ENST00000356825 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
SMAD2-202ENST00000356825 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
SMAD2-202ENST00000356825 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
SMAD2-202ENST00000356825 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
SMAD2-202ENST00000356825 CDR1P51861 262 aa17.48■□□□□ 0.39
SMAD2-202ENST00000356825 REC8O95072 547 aa17.48■□□□□ 0.39
SMAD2-202ENST00000356825 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMAD2-202ENST00000356825 TMEM132AQ24JP5 1023 aa17.47■□□□□ 0.39
SMAD2-202ENST00000356825 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
SMAD2-202ENST00000356825 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
SMAD2-202ENST00000356825 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
SMAD2-202ENST00000356825 MYO6Q9UM54 1294 aa17.47■□□□□ 0.39
SMAD2-202ENST00000356825 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
SMAD2-202ENST00000356825 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
SMAD2-202ENST00000356825 ZFYVE27Q5T4F4 411 aa17.46■□□□□ 0.39
SMAD2-202ENST00000356825 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
SMAD2-202ENST00000356825 PAF1Q8N7H5 531 aa17.45■□□□□ 0.38
SMAD2-202ENST00000356825 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
SMAD2-202ENST00000356825 CCDC173Q0VFZ6 552 aa17.45■□□□□ 0.38
SMAD2-202ENST00000356825 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■■□□ 15.8
SMAD2-202ENST00000356825 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
SMAD2-202ENST00000356825 ATF3P18847 181 aa17.44■□□□□ 0.38
SMAD2-202ENST00000356825 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
SMAD2-202ENST00000356825 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
SMAD2-202ENST00000356825 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
SMAD2-202ENST00000356825 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
SMAD2-202ENST00000356825 XBP1P17861 261 aa17.43■□□□□ 0.38
SMAD2-202ENST00000356825 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
SMAD2-202ENST00000356825 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMAD2-202ENST00000356825 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
SMAD2-202ENST00000356825 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
SMAD2-202ENST00000356825 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
SMAD2-202ENST00000356825 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
SMAD2-202ENST00000356825 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
SMAD2-202ENST00000356825 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
SMAD2-202ENST00000356825 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
SMAD2-202ENST00000356825 IPO9Q96P70 1041 aaKnown RBP17.4■□□□□ 0.38
SMAD2-202ENST00000356825 FYB1O15117 783 aa17.4■□□□□ 0.38
SMAD2-202ENST00000356825 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
SMAD2-202ENST00000356825 CENPQQ7L2Z9 268 aaPredicted RBP17.39■□□□□ 0.37
SMAD2-202ENST00000356825 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
SMAD2-202ENST00000356825 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
SMAD2-202ENST00000356825 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
SMAD2-202ENST00000356825 SLC3A2P08195 630 aaKnown RBP17.38■□□□□ 0.37
SMAD2-202ENST00000356825 ZNF771Q7L3S4 317 aaPredicted RBP17.38■□□□□ 0.37
SMAD2-202ENST00000356825 OFD1O75665 1012 aa17.38■□□□□ 0.37
SMAD2-202ENST00000356825 ERC2O15083 957 aa17.38■□□□□ 0.37
SMAD2-202ENST00000356825 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
SMAD2-202ENST00000356825 SASS6Q6UVJ0 657 aa17.38■□□□□ 0.37
SMAD2-202ENST00000356825 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
SMAD2-202ENST00000356825 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
SMAD2-202ENST00000356825 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
SMAD2-202ENST00000356825 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SMAD2-202ENST00000356825 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
SMAD2-202ENST00000356825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
SMAD2-202ENST00000356825 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
SMAD2-202ENST00000356825 E9PSI1 815 aa17.36■□□□□ 0.37
SMAD2-202ENST00000356825 CUX1P39880 1505 aa17.36■□□□□ 0.37
SMAD2-202ENST00000356825 KIF6Q6ZMV9 814 aa17.36■□□□□ 0.37
SMAD2-202ENST00000356825 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
SMAD2-202ENST00000356825 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
SMAD2-202ENST00000356825 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
SMAD2-202ENST00000356825 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
SMAD2-202ENST00000356825 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
SMAD2-202ENST00000356825 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
SMAD2-202ENST00000356825 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
SMAD2-202ENST00000356825 SYCP1Q15431 976 aa17.34■□□□□ 0.37
SMAD2-202ENST00000356825 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
SMAD2-202ENST00000356825 CDK5RAP3Q96JB5 506 aa17.34■□□□□ 0.37
SMAD2-202ENST00000356825 SETD1BQ9UPS6 1966 aaKnown RBP17.34■□□□□ 0.37
SMAD2-202ENST00000356825 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
SMAD2-202ENST00000356825 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
SMAD2-202ENST00000356825 RIC3Q7Z5B4 369 aa17.32■□□□□ 0.36
SMAD2-202ENST00000356825 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
SMAD2-202ENST00000356825 FOSBP53539 338 aa17.31■□□□□ 0.36
SMAD2-202ENST00000356825 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms