RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
TRIM4-203ENST00000355947 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
TRIM4-203ENST00000355947 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
TRIM4-203ENST00000355947 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
TRIM4-203ENST00000355947 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
TRIM4-203ENST00000355947 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRIM4-203ENST00000355947 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
TRIM4-203ENST00000355947 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
TRIM4-203ENST00000355947 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
TRIM4-203ENST00000355947 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
TRIM4-203ENST00000355947 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
TRIM4-203ENST00000355947 ITPRIPQ8IWB1 547 aa17.29■□□□□ 0.36
TRIM4-203ENST00000355947 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
TRIM4-203ENST00000355947 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
TRIM4-203ENST00000355947 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
TRIM4-203ENST00000355947 USP19O94966 1318 aa17.28■□□□□ 0.36
TRIM4-203ENST00000355947 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
TRIM4-203ENST00000355947 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIM4-203ENST00000355947 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
TRIM4-203ENST00000355947 TRAK2O60296 914 aa17.27■□□□□ 0.36
TRIM4-203ENST00000355947 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
TRIM4-203ENST00000355947 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
TRIM4-203ENST00000355947 GLIPR1L2Q4G1C9 344 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 HSP90AA2PQ14568 343 aaPredicted RBP17.26■□□□□ 0.35
TRIM4-203ENST00000355947 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
TRIM4-203ENST00000355947 POLR1AO95602 1720 aaPredicted RBP17.25■□□□□ 0.35
TRIM4-203ENST00000355947 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
TRIM4-203ENST00000355947 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
TRIM4-203ENST00000355947 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
TRIM4-203ENST00000355947 MCM4P33991 863 aa17.25■□□□□ 0.35
TRIM4-203ENST00000355947 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
TRIM4-203ENST00000355947 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
TRIM4-203ENST00000355947 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
TRIM4-203ENST00000355947 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
TRIM4-203ENST00000355947 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
TRIM4-203ENST00000355947 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
TRIM4-203ENST00000355947 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
TRIM4-203ENST00000355947 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
TRIM4-203ENST00000355947 SLC12A5Q9H2X9 1139 aa17.21■□□□□ 0.35
TRIM4-203ENST00000355947 COL17A1Q9UMD9 1497 aaPredicted RBP17.21■□□□□ 0.34
TRIM4-203ENST00000355947 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
TRIM4-203ENST00000355947 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
TRIM4-203ENST00000355947 A2MP01023 1474 aa17.2■□□□□ 0.34
TRIM4-203ENST00000355947 KIAA0556O60303 1618 aa17.2■□□□□ 0.34
TRIM4-203ENST00000355947 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
TRIM4-203ENST00000355947 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
TRIM4-203ENST00000355947 ELL2O00472 640 aaPredicted RBP17.18■□□□□ 0.34
TRIM4-203ENST00000355947 MTHFSP49914 203 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 APBB1O00213 710 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
TRIM4-203ENST00000355947 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
TRIM4-203ENST00000355947 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
TRIM4-203ENST00000355947 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
TRIM4-203ENST00000355947 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
TRIM4-203ENST00000355947 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
TRIM4-203ENST00000355947 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
TRIM4-203ENST00000355947 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
TRIM4-203ENST00000355947 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
TRIM4-203ENST00000355947 KIF3BO15066 747 aa17.15■□□□□ 0.34
TRIM4-203ENST00000355947 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
TRIM4-203ENST00000355947 GRPEL1Q9HAV7 217 aa17.14■□□□□ 0.33
TRIM4-203ENST00000355947 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
TRIM4-203ENST00000355947 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
TRIM4-203ENST00000355947 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
TRIM4-203ENST00000355947 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
TRIM4-203ENST00000355947 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
TRIM4-203ENST00000355947 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
TRIM4-203ENST00000355947 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
TRIM4-203ENST00000355947 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
TRIM4-203ENST00000355947 ANP32BQ92688 251 aaKnown RBP17.12■□□□□ 0.33
TRIM4-203ENST00000355947 STK26Q9P289 416 aa17.12■□□□□ 0.33
TRIM4-203ENST00000355947 ESPNB1AK53 854 aa17.11■□□□□ 0.33
TRIM4-203ENST00000355947 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
TRIM4-203ENST00000355947 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
TRIM4-203ENST00000355947 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
TRIM4-203ENST00000355947 MRE11P49959 708 aa17.1■□□□□ 0.33
TRIM4-203ENST00000355947 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
TRIM4-203ENST00000355947 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
TRIM4-203ENST00000355947 ATP10BO94823 1461 aa17.09■□□□□ 0.33
TRIM4-203ENST00000355947 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.33
TRIM4-203ENST00000355947 PTPRGP23470 1445 aa17.08■□□□□ 0.33
TRIM4-203ENST00000355947 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.32
TRIM4-203ENST00000355947 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.32
TRIM4-203ENST00000355947 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
TRIM4-203ENST00000355947 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
TRIM4-203ENST00000355947 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
TRIM4-203ENST00000355947 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
TRIM4-203ENST00000355947 MPNDQ8N594 471 aa17.07■□□□□ 0.32
TRIM4-203ENST00000355947 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
TRIM4-203ENST00000355947 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms