RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 PRDM10Q9NQV6 1147 aa17.63■□□□□ 0.41
DNMT3B-204ENST00000353855 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
DNMT3B-204ENST00000353855 CCDC173Q0VFZ6 552 aa17.62■□□□□ 0.41
DNMT3B-204ENST00000353855 ST18O60284 1047 aa17.61■□□□□ 0.41
DNMT3B-204ENST00000353855 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
DNMT3B-204ENST00000353855 RNF123Q5XPI4 1314 aa17.61■□□□□ 0.41
DNMT3B-204ENST00000353855 MAP7D2Q96T17 732 aa17.61■□□□□ 0.41
DNMT3B-204ENST00000353855 SEC24BO95487 1268 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 CSPP1Q1MSJ5 1256 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 UQCRHLA0A096LP55 91 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 UQCRHP07919 91 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
DNMT3B-204ENST00000353855 DDX19BQ9UMR2 479 aa17.59■□□□□ 0.41
DNMT3B-204ENST00000353855 MCCP23508 829 aa17.58■□□□□ 0.41
DNMT3B-204ENST00000353855 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.41
DNMT3B-204ENST00000353855 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.4
DNMT3B-204ENST00000353855 ZNF771Q7L3S4 317 aaPredicted RBP17.58■□□□□ 0.4
DNMT3B-204ENST00000353855 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
DNMT3B-204ENST00000353855 ZSCAN30Q86W11 494 aa17.58■□□□□ 0.4
DNMT3B-204ENST00000353855 PRPF40AO75400 957 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-204ENST00000353855 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
DNMT3B-204ENST00000353855 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
DNMT3B-204ENST00000353855 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
DNMT3B-204ENST00000353855 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
DNMT3B-204ENST00000353855 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
DNMT3B-204ENST00000353855 ANKRD50Q9ULJ7 1429 aa17.55■□□□□ 0.4
DNMT3B-204ENST00000353855 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
DNMT3B-204ENST00000353855 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
DNMT3B-204ENST00000353855 ZRSR1Q15695 479 aaKnown RBP17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 STK26Q9P289 416 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 ZHX1Q9UKY1 873 aaPredicted RBP17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 KIAA1107Q9UPP5 1409 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 NUCB2P80303 420 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 KCNJ4P48050 445 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
DNMT3B-204ENST00000353855 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.4
DNMT3B-204ENST00000353855 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.39
DNMT3B-204ENST00000353855 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.39
DNMT3B-204ENST00000353855 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.39
DNMT3B-204ENST00000353855 TBC1D32Q96NH3 1257 aa17.51■□□□□ 0.39
DNMT3B-204ENST00000353855 SUPT6HQ7KZ85 1726 aaKnown RBP17.51■□□□□ 0.39
DNMT3B-204ENST00000353855 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
DNMT3B-204ENST00000353855 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
DNMT3B-204ENST00000353855 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
DNMT3B-204ENST00000353855 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
DNMT3B-204ENST00000353855 PHF14O94880 888 aa17.5■□□□□ 0.39
DNMT3B-204ENST00000353855 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
DNMT3B-204ENST00000353855 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
DNMT3B-204ENST00000353855 C1orf115Q9H7X2 142 aa17.49■□□□□ 0.39
DNMT3B-204ENST00000353855 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
DNMT3B-204ENST00000353855 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
DNMT3B-204ENST00000353855 NUTM2DQ5VT03 806 aaPredicted RBP17.48■□□□□ 0.39
DNMT3B-204ENST00000353855 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
DNMT3B-204ENST00000353855 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
DNMT3B-204ENST00000353855 DAPK1P53355 1430 aa17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 K7ELQ4 463 aaPredicted RBP17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 EPRSP07814 1512 aaKnown RBP17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
DNMT3B-204ENST00000353855 KANK1Q14678 1352 aa17.46■□□□□ 0.39
DNMT3B-204ENST00000353855 SSFA2P28290 1259 aa17.46■□□□□ 0.39
DNMT3B-204ENST00000353855 AAMPQ13685 434 aa17.46■□□□□ 0.39
DNMT3B-204ENST00000353855 SOX12O15370 315 aa17.46■□□□□ 0.39
DNMT3B-204ENST00000353855 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.38
DNMT3B-204ENST00000353855 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 MTHFSP49914 203 aa17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
DNMT3B-204ENST00000353855 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
DNMT3B-204ENST00000353855 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
DNMT3B-204ENST00000353855 RIPK4P57078 832 aa17.44■□□□□ 0.38
DNMT3B-204ENST00000353855 CBX1P83916 185 aa17.43■□□□□ 0.38
DNMT3B-204ENST00000353855 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
DNMT3B-204ENST00000353855 CIZ1Q9ULV3 898 aaPredicted RBP17.43■□□□□ 0.38
DNMT3B-204ENST00000353855 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
DNMT3B-204ENST00000353855 PTPRGP23470 1445 aa17.43■□□□□ 0.38
DNMT3B-204ENST00000353855 FGD1P98174 961 aa17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 KIF3BO15066 747 aa17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 CDC45O75419 566 aa17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
DNMT3B-204ENST00000353855 KDM2BQ8NHM5 1336 aa17.41■□□□□ 0.38
DNMT3B-204ENST00000353855 SYCE3A1L190 88 aa17.41■□□□□ 0.38
DNMT3B-204ENST00000353855 KIF16BQ96L93 1317 aa17.41■□□□□ 0.38
DNMT3B-204ENST00000353855 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
DNMT3B-204ENST00000353855 CUL7Q14999 1698 aa17.4■□□□□ 0.38
DNMT3B-204ENST00000353855 REC8O95072 547 aa17.4■□□□□ 0.38
DNMT3B-204ENST00000353855 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms