RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
PTPN11-201ENST00000351677 HMOX1P09601 288 aa19.77■□□□□ 0.76
PTPN11-201ENST00000351677 DDX49Q9Y6V7 483 aaKnown RBP19.77■□□□□ 0.76
PTPN11-201ENST00000351677 TEFQ10587 303 aa19.77■□□□□ 0.76
PTPN11-201ENST00000351677 PANK1Q8TE04 598 aa19.77■□□□□ 0.76
PTPN11-201ENST00000351677 CABP2Q9NPB3 220 aa19.76■□□□□ 0.75
PTPN11-201ENST00000351677 CDCA7LQ96GN5 454 aa19.76■□□□□ 0.75
PTPN11-201ENST00000351677 NGEFQ8N5V2 710 aa19.76■□□□□ 0.75
PTPN11-201ENST00000351677 TOMM22Q9NS69 142 aa19.75■□□□□ 0.75
PTPN11-201ENST00000351677 TPM4P67936 248 aa19.74■□□□□ 0.75
PTPN11-201ENST00000351677 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
PTPN11-201ENST00000351677 PHF14O94880 888 aa19.73■□□□□ 0.75
PTPN11-201ENST00000351677 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
PTPN11-201ENST00000351677 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
PTPN11-201ENST00000351677 API5Q9BZZ5 524 aaKnown RBP19.73■□□□□ 0.75
PTPN11-201ENST00000351677 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
PTPN11-201ENST00000351677 LNPKQ9C0E8 428 aa19.72■□□□□ 0.75
PTPN11-201ENST00000351677 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
PTPN11-201ENST00000351677 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
PTPN11-201ENST00000351677 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
PTPN11-201ENST00000351677 C9orf78Q9NZ63 289 aaPredicted RBP19.71■□□□□ 0.75
PTPN11-201ENST00000351677 DIAPH3Q9NSV4 1193 aa19.7■□□□□ 0.74
PTPN11-201ENST00000351677 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
PTPN11-201ENST00000351677 H3BQV1 296 aa19.69■□□□□ 0.74
PTPN11-201ENST00000351677 SF3A1Q15459 793 aaKnown RBP19.69■□□□□ 0.74
PTPN11-201ENST00000351677 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
PTPN11-201ENST00000351677 MTHFSP49914 203 aa19.69■□□□□ 0.74
PTPN11-201ENST00000351677 FKBP5Q13451 457 aaPredicted RBP19.69■□□□□ 0.74
PTPN11-201ENST00000351677 STAC3Q96MF2 364 aa19.69■□□□□ 0.74
PTPN11-201ENST00000351677 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
PTPN11-201ENST00000351677 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
PTPN11-201ENST00000351677 CREBRFQ8IUR6 639 aa19.68■□□□□ 0.74
PTPN11-201ENST00000351677 REC8O95072 547 aa19.68■□□□□ 0.74
PTPN11-201ENST00000351677 PPP2R1AP30153 589 aa19.67■□□□□ 0.74
PTPN11-201ENST00000351677 RASSF8Q8NHQ8 419 aa19.67■□□□□ 0.74
PTPN11-201ENST00000351677 GTF2E1P29083 439 aaPredicted RBP19.67■□□□□ 0.74
PTPN11-201ENST00000351677 GNAI1P63096 354 aa19.67■□□□□ 0.74
PTPN11-201ENST00000351677 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
PTPN11-201ENST00000351677 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
PTPN11-201ENST00000351677 SKOR2Q2VWA4 1001 aaPredicted RBP19.66■□□□□ 0.74
PTPN11-201ENST00000351677 KIF3AQ9Y496 699 aa19.66■□□□□ 0.74
PTPN11-201ENST00000351677 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
PTPN11-201ENST00000351677 NESP48681 1621 aa19.66■□□□□ 0.74
PTPN11-201ENST00000351677 NEXNQ0ZGT2 675 aa19.66■□□□□ 0.74
PTPN11-201ENST00000351677 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
PTPN11-201ENST00000351677 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
PTPN11-201ENST00000351677 CCDC34Q96HJ3 373 aa19.65■□□□□ 0.74
PTPN11-201ENST00000351677 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
PTPN11-201ENST00000351677 PSME1Q06323 249 aa19.64■□□□□ 0.74
PTPN11-201ENST00000351677 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
PTPN11-201ENST00000351677 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
PTPN11-201ENST00000351677 IFIT2P09913 472 aaKnown RBP19.63■□□□□ 0.73
PTPN11-201ENST00000351677 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
PTPN11-201ENST00000351677 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
PTPN11-201ENST00000351677 C22orf23Q9BZE7 217 aa19.63■□□□□ 0.73
PTPN11-201ENST00000351677 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
PTPN11-201ENST00000351677 EVA1CP58658 441 aa19.62■□□□□ 0.73
PTPN11-201ENST00000351677 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTPN11-201ENST00000351677 NUTM2GQ5VZR2 741 aa19.62■□□□□ 0.73
PTPN11-201ENST00000351677 ATP6V1DQ9Y5K8 247 aa19.62■□□□□ 0.73
PTPN11-201ENST00000351677 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
PTPN11-201ENST00000351677 RUFY2Q8WXA3 655 aa19.62■□□□□ 0.73
PTPN11-201ENST00000351677 MCTP1Q6DN14 999 aa19.61■□□□□ 0.73
PTPN11-201ENST00000351677 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
PTPN11-201ENST00000351677 PRG4Q92954 1404 aaPredicted RBP19.61■□□□□ 0.73
PTPN11-201ENST00000351677 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
PTPN11-201ENST00000351677 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
PTPN11-201ENST00000351677 TIAM1Q13009 1591 aa19.6■□□□□ 0.73
PTPN11-201ENST00000351677 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
PTPN11-201ENST00000351677 C9orf84Q5VXU9 1444 aa19.6■□□□□ 0.73
PTPN11-201ENST00000351677 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
PTPN11-201ENST00000351677 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
PTPN11-201ENST00000351677 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
PTPN11-201ENST00000351677 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
PTPN11-201ENST00000351677 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
PTPN11-201ENST00000351677 G3V3G9 751 aa19.58■□□□□ 0.72
PTPN11-201ENST00000351677 DCAF8Q5TAQ9 597 aa19.58■□□□□ 0.72
PTPN11-201ENST00000351677 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
PTPN11-201ENST00000351677 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTPN11-201ENST00000351677 NFKBIBQ15653 356 aa19.56■□□□□ 0.72
PTPN11-201ENST00000351677 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
PTPN11-201ENST00000351677 SLC12A5Q9H2X9 1139 aa19.56■□□□□ 0.72
PTPN11-201ENST00000351677 GOLGA6L19H0YKK7 550 aa19.55■□□□□ 0.72
PTPN11-201ENST00000351677 BCAR3O75815 825 aa19.55■□□□□ 0.72
PTPN11-201ENST00000351677 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
PTPN11-201ENST00000351677 BECN2A8MW95 431 aa19.54■□□□□ 0.72
PTPN11-201ENST00000351677 PRKAR2BP31323 418 aa19.54■□□□□ 0.72
PTPN11-201ENST00000351677 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
PTPN11-201ENST00000351677 AAMPQ13685 434 aa19.53■□□□□ 0.72
PTPN11-201ENST00000351677 PRAM1Q96QH2 718 aa19.53■□□□□ 0.72
PTPN11-201ENST00000351677 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-201ENST00000351677 AIMP1Q12904 312 aaKnown RBP19.53■□□□□ 0.72
PTPN11-201ENST00000351677 TSR2Q969E8 191 aaKnown RBP19.53■□□□□ 0.72
PTPN11-201ENST00000351677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.53■□□□□ 0.72
PTPN11-201ENST00000351677 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
PTPN11-201ENST00000351677 NOC3LQ8WTT2 800 aaKnown RBP19.52■□□□□ 0.72
PTPN11-201ENST00000351677 NLRP6P59044 892 aa19.52■□□□□ 0.71
PTPN11-201ENST00000351677 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.71
PTPN11-201ENST00000351677 DAPK1P53355 1430 aa19.52■□□□□ 0.71
PTPN11-201ENST00000351677 PES1O00541 588 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms