RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
UBE2D3-204ENST00000349311 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
UBE2D3-204ENST00000349311 SOWAHBA6NEL2 793 aa13.01□□□□□ -0.33
UBE2D3-204ENST00000349311 CLCN1P35523 988 aa13.01□□□□□ -0.33
UBE2D3-204ENST00000349311 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
UBE2D3-204ENST00000349311 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
UBE2D3-204ENST00000349311 WNT2BQ93097 391 aa12.99□□□□□ -0.33
UBE2D3-204ENST00000349311 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
UBE2D3-204ENST00000349311 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-204ENST00000349311 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-204ENST00000349311 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
UBE2D3-204ENST00000349311 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
UBE2D3-204ENST00000349311 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-204ENST00000349311 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-204ENST00000349311 SLC10A3P09131 477 aa12.95□□□□□ -0.34
UBE2D3-204ENST00000349311 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-204ENST00000349311 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
UBE2D3-204ENST00000349311 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
UBE2D3-204ENST00000349311 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
UBE2D3-204ENST00000349311 CD46P15529 392 aa12.93□□□□□ -0.34
UBE2D3-204ENST00000349311 BCAMP50895 628 aa12.93□□□□□ -0.34
UBE2D3-204ENST00000349311 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
UBE2D3-204ENST00000349311 MS4A1P11836 297 aa12.92□□□□□ -0.34
UBE2D3-204ENST00000349311 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-204ENST00000349311 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-204ENST00000349311 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-204ENST00000349311 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-204ENST00000349311 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
UBE2D3-204ENST00000349311 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-204ENST00000349311 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.34
UBE2D3-204ENST00000349311 TSR3Q9UJK0 312 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-204ENST00000349311 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
UBE2D3-204ENST00000349311 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
UBE2D3-204ENST00000349311 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
UBE2D3-204ENST00000349311 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
UBE2D3-204ENST00000349311 GCGRP47871 477 aa12.85□□□□□ -0.35
UBE2D3-204ENST00000349311 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
UBE2D3-204ENST00000349311 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
UBE2D3-204ENST00000349311 PPP4CP60510 307 aa12.83□□□□□ -0.36
UBE2D3-204ENST00000349311 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
UBE2D3-204ENST00000349311 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
UBE2D3-204ENST00000349311 APLP1P51693 650 aa12.8□□□□□ -0.36
UBE2D3-204ENST00000349311 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
UBE2D3-204ENST00000349311 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 ACTN4O43707 911 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 CFHP08603 1231 aa12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
UBE2D3-204ENST00000349311 NACADO15069 1562 aa12.78□□□□□ -0.36
UBE2D3-204ENST00000349311 RNF40O75150 1001 aa12.78□□□□□ -0.36
UBE2D3-204ENST00000349311 PTPN5P54829 565 aa12.78□□□□□ -0.36
UBE2D3-204ENST00000349311 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
UBE2D3-204ENST00000349311 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
UBE2D3-204ENST00000349311 ABCC9O60706 1549 aa12.75□□□□□ -0.37
UBE2D3-204ENST00000349311 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
UBE2D3-204ENST00000349311 SPIRE2Q8WWL2 714 aa12.75□□□□□ -0.37
UBE2D3-204ENST00000349311 KDM4AO75164 1064 aa12.73□□□□□ -0.37
UBE2D3-204ENST00000349311 USP46P62068 366 aa12.72□□□□□ -0.37
UBE2D3-204ENST00000349311 FUT2Q10981 343 aa12.71□□□□□ -0.37
UBE2D3-204ENST00000349311 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
UBE2D3-204ENST00000349311 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
UBE2D3-204ENST00000349311 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
UBE2D3-204ENST00000349311 HOXA2O43364 376 aa12.69□□□□□ -0.38
UBE2D3-204ENST00000349311 GJA5P36382 358 aa12.69□□□□□ -0.38
UBE2D3-204ENST00000349311 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
UBE2D3-204ENST00000349311 MORN1Q5T089 497 aa12.68□□□□□ -0.38
UBE2D3-204ENST00000349311 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
UBE2D3-204ENST00000349311 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
UBE2D3-204ENST00000349311 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-204ENST00000349311 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
UBE2D3-204ENST00000349311 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
UBE2D3-204ENST00000349311 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
UBE2D3-204ENST00000349311 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
UBE2D3-204ENST00000349311 HRCP23327 699 aa12.65□□□□□ -0.38
UBE2D3-204ENST00000349311 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
UBE2D3-204ENST00000349311 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
UBE2D3-204ENST00000349311 PCDHB3Q9Y5E6 796 aa12.65□□□□□ -0.38
UBE2D3-204ENST00000349311 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
UBE2D3-204ENST00000349311 SPTLC1O15269 473 aa12.64□□□□□ -0.39
UBE2D3-204ENST00000349311 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 RSBN1LQ6PCB5 846 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 BLOC1S3Q6QNY0 202 aa12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 HLA-CQ95604 372 aa12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 MTRQ99707 1265 aa12.63□□□□□ -0.39
UBE2D3-204ENST00000349311 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-204ENST00000349311 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-204ENST00000349311 NDUFV2P19404 249 aa12.61□□□□□ -0.39
UBE2D3-204ENST00000349311 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
UBE2D3-204ENST00000349311 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
UBE2D3-204ENST00000349311 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
UBE2D3-204ENST00000349311 SLC27A5Q9Y2P5 690 aa12.61□□□□□ -0.39
UBE2D3-204ENST00000349311 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
UBE2D3-204ENST00000349311 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
UBE2D3-204ENST00000349311 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
UBE2D3-204ENST00000349311 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBE2D3-204ENST00000349311 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
UBE2D3-204ENST00000349311 ZPR1O75312 459 aa12.58□□□□□ -0.4
UBE2D3-204ENST00000349311 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms