RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 LTV1Q96GA3 475 aaPredicted RBP18.83■□□□□ 0.61
SBF1-201ENST00000348911 H3BQV1 296 aa18.83■□□□□ 0.6
SBF1-201ENST00000348911 IFFO2Q5TF58 517 aa18.83■□□□□ 0.6
SBF1-201ENST00000348911 TNNT3P45378 269 aaPredicted RBP18.83■□□□□ 0.6
SBF1-201ENST00000348911 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
SBF1-201ENST00000348911 SF3A1Q15459 793 aaKnown RBP18.82■□□□□ 0.6
SBF1-201ENST00000348911 NUTM2FA1L443 756 aa18.82■□□□□ 0.6
SBF1-201ENST00000348911 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
SBF1-201ENST00000348911 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
SBF1-201ENST00000348911 PTPRGP23470 1445 aa18.81■□□□□ 0.6
SBF1-201ENST00000348911 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
SBF1-201ENST00000348911 MINK1Q8N4C8 1332 aaPredicted RBP18.81■□□□□ 0.6
SBF1-201ENST00000348911 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
SBF1-201ENST00000348911 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
SBF1-201ENST00000348911 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
SBF1-201ENST00000348911 ISY1Q9ULR0 285 aaKnown RBP18.8■□□□□ 0.6
SBF1-201ENST00000348911 NUCB2P80303 420 aa18.79■□□□□ 0.6
SBF1-201ENST00000348911 MCTP1Q6DN14 999 aa18.79■□□□□ 0.6
SBF1-201ENST00000348911 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.79■□□□□ 0.6
SBF1-201ENST00000348911 INTS3Q68E01 1043 aaKnown RBP18.79■□□□□ 0.6
SBF1-201ENST00000348911 FAM184AQ8NB25 1140 aa18.79■□□□□ 0.6
SBF1-201ENST00000348911 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
SBF1-201ENST00000348911 MRE11P49959 708 aa18.78■□□□□ 0.6
SBF1-201ENST00000348911 GOLGA6L1Q8N7Z2 621 aa18.78■□□□□ 0.6
SBF1-201ENST00000348911 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
SBF1-201ENST00000348911 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
SBF1-201ENST00000348911 FAM13BQ9NYF5 915 aa18.77■□□□□ 0.6
SBF1-201ENST00000348911 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
SBF1-201ENST00000348911 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
SBF1-201ENST00000348911 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
SBF1-201ENST00000348911 BECN2A8MW95 431 aa18.77■□□□□ 0.59
SBF1-201ENST00000348911 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
SBF1-201ENST00000348911 BACH2Q9BYV9 841 aa18.76■□□□□ 0.59
SBF1-201ENST00000348911 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
SBF1-201ENST00000348911 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
SBF1-201ENST00000348911 RUFY2Q8WXA3 655 aa18.75■□□□□ 0.59
SBF1-201ENST00000348911 CREBRFQ8IUR6 639 aa18.75■□□□□ 0.59
SBF1-201ENST00000348911 ANO2Q9NQ90 1003 aa18.75■□□□□ 0.59
SBF1-201ENST00000348911 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
SBF1-201ENST00000348911 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
SBF1-201ENST00000348911 NOC3LQ8WTT2 800 aaKnown RBP18.74■□□□□ 0.59
SBF1-201ENST00000348911 CFTRP13569 1480 aa18.74■□□□□ 0.59
SBF1-201ENST00000348911 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SBF1-201ENST00000348911 TRAK2O60296 914 aa18.73■□□□□ 0.59
SBF1-201ENST00000348911 CLSTN1O94985 981 aa18.73■□□□□ 0.59
SBF1-201ENST00000348911 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
SBF1-201ENST00000348911 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
SBF1-201ENST00000348911 CDC45O75419 566 aa18.72■□□□□ 0.59
SBF1-201ENST00000348911 ZKSCAN1P17029 563 aaPredicted RBP18.72■□□□□ 0.59
SBF1-201ENST00000348911 GNAI1P63096 354 aa18.72■□□□□ 0.59
SBF1-201ENST00000348911 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
SBF1-201ENST00000348911 RASSF8Q8NHQ8 419 aa18.72■□□□□ 0.59
SBF1-201ENST00000348911 ZNF592Q92610 1267 aa18.72■□□□□ 0.59
SBF1-201ENST00000348911 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
SBF1-201ENST00000348911 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
SBF1-201ENST00000348911 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
SBF1-201ENST00000348911 TPM3P06753 285 aa18.71■□□□□ 0.59
SBF1-201ENST00000348911 CHMP4CQ96CF2 233 aa18.71■□□□□ 0.59
SBF1-201ENST00000348911 HFM1A2PYH4 1435 aa18.71■□□□□ 0.58
SBF1-201ENST00000348911 TOMM22Q9NS69 142 aa18.7■□□□□ 0.58
SBF1-201ENST00000348911 TCP11L2Q8N4U5 519 aa18.69■□□□□ 0.58
SBF1-201ENST00000348911 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
SBF1-201ENST00000348911 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
SBF1-201ENST00000348911 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
SBF1-201ENST00000348911 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
SBF1-201ENST00000348911 HMOX1P09601 288 aa18.68■□□□□ 0.58
SBF1-201ENST00000348911 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
SBF1-201ENST00000348911 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
SBF1-201ENST00000348911 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
SBF1-201ENST00000348911 C9orf78Q9NZ63 289 aaPredicted RBP18.67■□□□□ 0.58
SBF1-201ENST00000348911 FKBP5Q13451 457 aaPredicted RBP18.67■□□□□ 0.58
SBF1-201ENST00000348911 ZNF771Q7L3S4 317 aaPredicted RBP18.67■□□□□ 0.58
SBF1-201ENST00000348911 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
SBF1-201ENST00000348911 BCAR3O75815 825 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 MTHFSP49914 203 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 BICD2Q8TD16 824 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
SBF1-201ENST00000348911 TEFQ10587 303 aa18.66■□□□□ 0.58
SBF1-201ENST00000348911 KIAA1107Q9UPP5 1409 aa18.65■□□□□ 0.58
SBF1-201ENST00000348911 CCAR2Q8N163 923 aaKnown RBP18.65■□□□□ 0.58
SBF1-201ENST00000348911 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
SBF1-201ENST00000348911 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
SBF1-201ENST00000348911 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
SBF1-201ENST00000348911 R3HCC1Q9Y3T6 440 aaKnown RBP18.65■□□□□ 0.58
SBF1-201ENST00000348911 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.58
SBF1-201ENST00000348911 TPD52L1Q16890 204 aaPredicted RBP18.64■□□□□ 0.57
SBF1-201ENST00000348911 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
SBF1-201ENST00000348911 RNF20Q5VTR2 975 aa18.63■□□□□ 0.57
SBF1-201ENST00000348911 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
SBF1-201ENST00000348911 MSH5O43196 834 aa18.62■□□□□ 0.57
SBF1-201ENST00000348911 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
SBF1-201ENST00000348911 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
SBF1-201ENST00000348911 CAVIN1Q6NZI2 390 aaKnown RBP18.62■□□□□ 0.57
SBF1-201ENST00000348911 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
SBF1-201ENST00000348911 PES1O00541 588 aaKnown RBP18.61■□□□□ 0.57
SBF1-201ENST00000348911 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
SBF1-201ENST00000348911 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
SBF1-201ENST00000348911 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms