RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 IFT172Q9UG01 1749 aa27.73■■■□□ 2.03
CHRNA3-202ENST00000348639 FKBP8Q14318 412 aa27.72■■■□□ 2.03
CHRNA3-202ENST00000348639 ADGRB3O60242 1522 aa27.72■■■□□ 2.03
CHRNA3-202ENST00000348639 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
CHRNA3-202ENST00000348639 NEFLP07196 543 aa27.72■■■□□ 2.03
CHRNA3-202ENST00000348639 MROH2AA6NES4 1674 aa27.72■■■□□ 2.03
CHRNA3-202ENST00000348639 NRXN1Q9ULB1 1477 aa27.69■■■□□ 2.02
CHRNA3-202ENST00000348639 BRD4O60885 1362 aaPredicted RBP27.69■■■□□ 2.02
CHRNA3-202ENST00000348639 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
CHRNA3-202ENST00000348639 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
CHRNA3-202ENST00000348639 CAMSAP1Q5T5Y3 1602 aa27.68■■■□□ 2.02
CHRNA3-202ENST00000348639 TMC1Q8TDI8 760 aa27.68■■■□□ 2.02
CHRNA3-202ENST00000348639 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
CHRNA3-202ENST00000348639 PNISRQ8TF01 805 aaKnown RBP27.67■■■□□ 2.02
CHRNA3-202ENST00000348639 NOS1P29475 1434 aa27.65■■■□□ 2.02
CHRNA3-202ENST00000348639 PANK3Q9H999 370 aa27.65■■■□□ 2.02
CHRNA3-202ENST00000348639 CDCA8Q53HL2 280 aa27.64■■■□□ 2.02
CHRNA3-202ENST00000348639 CFAP70Q5T0N1 1121 aa27.64■■■□□ 2.02
CHRNA3-202ENST00000348639 ZMYM4Q5VZL5 1548 aa27.63■■■□□ 2.01
CHRNA3-202ENST00000348639 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
CHRNA3-202ENST00000348639 ARHGAP31Q2M1Z3 1444 aa27.63■■■□□ 2.01
CHRNA3-202ENST00000348639 ZC3H13Q5T200 1668 aaKnown RBP27.62■■■□□ 2.01
CHRNA3-202ENST00000348639 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
CHRNA3-202ENST00000348639 RPGRIP1LQ68CZ1 1315 aa27.6■■■□□ 2.01
CHRNA3-202ENST00000348639 SIGLEC1Q9BZZ2 1709 aa27.6■■■□□ 2.01
CHRNA3-202ENST00000348639 SLC24A1O60721 1099 aa27.59■■■□□ 2.01
CHRNA3-202ENST00000348639 NLRP13Q86W25 1043 aa27.59■■■□□ 2.01
CHRNA3-202ENST00000348639 LRPPRCP42704 1394 aaKnown RBP27.58■■■□□ 2.01
CHRNA3-202ENST00000348639 PPLO60437 1756 aa27.57■■■□□ 2
CHRNA3-202ENST00000348639 PIK3C2BO00750 1634 aa27.57■■■□□ 2
CHRNA3-202ENST00000348639 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
CHRNA3-202ENST00000348639 SYNMO15061 1565 aa27.55■■■□□ 2
CHRNA3-202ENST00000348639 PIK3C2GO75747 1445 aa27.55■■■□□ 2
CHRNA3-202ENST00000348639 BCANQ96GW7 911 aa27.53■■■□□ 2
CHRNA3-202ENST00000348639 CC2D1BQ5T0F9 858 aaKnown RBP27.51■■■□□ 2
CHRNA3-202ENST00000348639 C14orf93Q9H972 538 aaKnown RBP27.51■■□□□ 1.99
CHRNA3-202ENST00000348639 MYO3AQ8NEV4 1616 aa27.49■■□□□ 1.99
CHRNA3-202ENST00000348639 IDI1Q13907 227 aa27.48■■□□□ 1.99
CHRNA3-202ENST00000348639 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
CHRNA3-202ENST00000348639 KDM5AP29375 1690 aaKnown RBP27.48■■□□□ 1.99
CHRNA3-202ENST00000348639 NUTM2DQ5VT03 806 aaPredicted RBP27.47■■□□□ 1.99
CHRNA3-202ENST00000348639 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
CHRNA3-202ENST00000348639 KNSTRNQ9Y448 316 aa27.46■■□□□ 1.99
CHRNA3-202ENST00000348639 ERVK-7P63135 1459 aa27.46■■□□□ 1.99
CHRNA3-202ENST00000348639 REREQ9P2R6 1566 aa27.46■■□□□ 1.99
CHRNA3-202ENST00000348639 MYOM1P52179 1685 aa27.46■■□□□ 1.99
CHRNA3-202ENST00000348639 SMG6Q86US8 1419 aaKnown RBP27.45■■□□□ 1.99
CHRNA3-202ENST00000348639 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
CHRNA3-202ENST00000348639 VGFO15240 615 aaPredicted RBP27.43■■□□□ 1.98
CHRNA3-202ENST00000348639 NEXMIFQ5QGS0 1516 aa27.43■■□□□ 1.98
CHRNA3-202ENST00000348639 PREX1Q8TCU6 1659 aa27.42■■□□□ 1.98
CHRNA3-202ENST00000348639 AGLP35573 1532 aa27.42■■□□□ 1.98
CHRNA3-202ENST00000348639 AMER1Q5JTC6 1135 aaPredicted RBP27.41■■□□□ 1.98
CHRNA3-202ENST00000348639 FBXO31Q5XUX0 539 aaPredicted RBP27.41■■□□□ 1.98
CHRNA3-202ENST00000348639 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
CHRNA3-202ENST00000348639 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 TRAK1Q9UPV9 953 aa27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 MLECQ14165 292 aa27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 ERICH6BQ5W0A0 696 aa27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 TMEM132EQ6IEE7 984 aa27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 PPP6R1Q9UPN7 881 aa27.4■■□□□ 1.98
CHRNA3-202ENST00000348639 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.98
CHRNA3-202ENST00000348639 NPC1L1Q9UHC9 1359 aa27.39■■□□□ 1.98
CHRNA3-202ENST00000348639 INSRP06213 1382 aa27.39■■□□□ 1.97
CHRNA3-202ENST00000348639 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
CHRNA3-202ENST00000348639 ZFYVE9O95405 1425 aa27.38■■□□□ 1.97
CHRNA3-202ENST00000348639 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
CHRNA3-202ENST00000348639 TMEM131LA2VDJ0 1609 aa27.33■■□□□ 1.97
CHRNA3-202ENST00000348639 MYO5BQ9ULV0 1848 aa27.32■■□□□ 1.96
CHRNA3-202ENST00000348639 IRX6P78412 446 aaPredicted RBP27.32■■□□□ 1.96
CHRNA3-202ENST00000348639 CLTCQ00610 1675 aaKnown RBP27.32■■□□□ 1.96
CHRNA3-202ENST00000348639 ARHGEF40Q8TER5 1519 aa27.32■■□□□ 1.96
CHRNA3-202ENST00000348639 SENP3-EIF4A1A0A087X0R7 540 aa27.31■■□□□ 1.96
CHRNA3-202ENST00000348639 PPP2R1AP30153 589 aa27.31■■□□□ 1.96
CHRNA3-202ENST00000348639 QRICH2Q9H0J4 1663 aa27.31■■□□□ 1.96
CHRNA3-202ENST00000348639 STAG3Q9UJ98 1225 aa27.29■■□□□ 1.96
CHRNA3-202ENST00000348639 BLMP54132 1417 aaPredicted RBP27.28■■□□□ 1.96
CHRNA3-202ENST00000348639 CARD14Q9BXL6 1004 aa27.24■■□□□ 1.95
CHRNA3-202ENST00000348639 ESF1Q9H501 851 aaKnown RBP27.24■■□□□ 1.95
CHRNA3-202ENST00000348639 RNF123Q5XPI4 1314 aa27.23■■□□□ 1.95
CHRNA3-202ENST00000348639 ARHGEF28Q8N1W1 1705 aaKnown RBP27.23■■□□□ 1.95
CHRNA3-202ENST00000348639 PDE3BQ13370 1112 aa27.23■■□□□ 1.95
CHRNA3-202ENST00000348639 PUS7Q96PZ0 661 aaKnown RBP27.23■■□□□ 1.95
CHRNA3-202ENST00000348639 PPP4R2Q9NY27 417 aa27.21■■□□□ 1.95
CHRNA3-202ENST00000348639 SPATA31D1Q6ZQQ2 1576 aa27.19■■□□□ 1.94
CHRNA3-202ENST00000348639 TSHZ2Q9NRE2 1034 aa27.19■■□□□ 1.94
CHRNA3-202ENST00000348639 STK26Q9P289 416 aa27.19■■□□□ 1.94
CHRNA3-202ENST00000348639 EVC2Q86UK5 1308 aa27.17■■□□□ 1.94
CHRNA3-202ENST00000348639 ADAMTS8Q9UP79 889 aa27.17■■□□□ 1.94
CHRNA3-202ENST00000348639 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
CHRNA3-202ENST00000348639 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
CHRNA3-202ENST00000348639 TULP4Q9NRJ4 1543 aa27.14■■□□□ 1.94
CHRNA3-202ENST00000348639 SLC12A5Q9H2X9 1139 aa27.14■■□□□ 1.93
CHRNA3-202ENST00000348639 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.93
CHRNA3-202ENST00000348639 ZMYM3Q14202 1370 aa27.14■■□□□ 1.93
CHRNA3-202ENST00000348639 NSD3Q9BZ95 1437 aa27.12■■□□□ 1.93
CHRNA3-202ENST00000348639 A2ML1A8K2U0 1454 aa27.11■■□□□ 1.93
CHRNA3-202ENST00000348639 ALKQ9UM73 1620 aa27.09■■□□□ 1.93
CHRNA3-202ENST00000348639 PTPRMP28827 1452 aa27.09■■□□□ 1.93
CHRNA3-202ENST00000348639 YTHDC2Q9H6S0 1430 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms